| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is vorA [H]
Identifier: 116620989
GI number: 116620989
Start: 2327676
End: 2329136
Strand: Reverse
Name: vorA [H]
Synonym: Acid_1870
Alternate gene names: 116620989
Gene position: 2329136-2327676 (Counterclockwise)
Preceding gene: 116620990
Following gene: 116620987
Centisome position: 23.37
GC content: 64.96
Gene sequence:
>1461_bases ATGGTTAAAGAAAGCGTGGCTAGTTTTACGATTACCCACGAACGCCCGAATGCCTTCTACGATACCTTCGAGCGCAAGAG CGAGCTCCAGCAGCAGACGCACTACTGCCCCGGCTGCGGACACGGCATCGTGCACAAGCTCCTCGCCAAAGCCATCGACG AGCTCGGCATCCAGGACCGCACCGTCCTCATCAGCCCGGTCGGCTGCTCCGTCTTTGCGTACTACTACTTCGATGTCGGC AACGTACAGGTCGCCCACGGACGCTGCCCCGCCGCCGCCACCGCCGTTAAACGCAGCCGCCCCGGCTCCATCGTCATCGG CTACCAGGGCGATGGCGATCTCGCCGCCATCGGCACCGCCGAGATCATTCACGCCGCCAACCGCTGCGAGCCCATCACGA TCATCTTCGTCAACAACGGCATCTATGGCATGACCGGCGGACAGATGGCCCCCACCACTCCGCTCGGCAAGAAGACCACC ACTTCTCCCTTCGGCCGCGAGAAGCTCAACGAAGGCTCGCCCCTCCACGTCTCGGAAATGCTCAACTCGCTCGATGCCCC CGTCTTCATCGAACGCGTCGCGCTCGGCAACAACAAGCAGATCATGCAGGCCGCCAAAGTCATCAAGCGCGCCGTCGAGA ACCAGGTCAAGGGCCTCGGCTTCTCCTTCGTCGAGGTGCTCTCCCCCTGCCCCACCATCTGGAAAATGCAGCCCGTCGAA GCCCAGCACTTCATCGCGGACGAAATGGCATCCATCTTTCCGGTAGGCAACCTGCGCGACCGCACGGCCGATGCCCCCGC CCGGCCCGCCGCCGCTCCGCCTCCCGCGCTCGCCGGCCTGCCCGCCCTGCTCGATATCGCCGACCCCATCCTCGAAACCG CCAGGCCTCCGCAGGAACTCGATCTCCGCGTCAAGGTCGCCGGCTTCGGCGGACAGGGCGTTCTCATGCTCGGCGAGGTC CTCGCCGAAGCCGGCCTCGAAGCCGGTTACGAAGTCTCGTGGCTTCCCTCCTACGGCCCCGAAATGCGCAGCGGCACCTC CAACTGCCACGTACGCCTTTCGCACAACGCCATCGATTCGCCGCTGGTCAGCGCCCCCAACGTGCTGCTCGCCATGAACG AACCCTCGCTCCGCAAATTCCTCCCCACCGTGGAAGAAGGCGGGGTCGTCTTCTATAACGGCAGCGAAATCCCGCCGGGC TGCGCGCGACACGACGTCCGCATCGCCGCCATCCCCTTCACCCGGATCGCCGACGAGTTGGGCGCGTCCAAAGTCGCCAA CATCGTCATGCTCGGCGCTCTGCTCGAAGCCACCGCCATCCTCGAGCAGGACCGCGTGGTCGCCGCGCTCCGACGGCTGG TCAAGAACCCTCGCTTCTTCGAACTCGACCTCACCGCCCTCGCCCGCGGCCGCGAAGAACTTCGCAACTCACAAGCCGAC GATTACCTCTGGGGTGTGTGA
Upstream 100 bases:
>100_bases GGCAACGCCCCTTCCGCCGAAGAGATTCTCGCTCACCTCGAACAGAAGTGGGGCAGGGCCGCAACCCGCTGGGAAGAAAT CCCCGAAGAGGTGGTCATCC
Downstream 100 bases:
>100_bases CCCTCGCACCCCGGGAACTCGCACGCCGTATCGCACACTCGCTTGTAGGTATCGAACGAGATCAACTCCACGTCCGGCGA CAGATAGCCAGGCTTCTCCG
Product: ketoisovalerate ferredoxin oxidoreductase subunit beta/ketoisovalerate ferredoxin oxidoreductase subunit gamma
Products: NA
Alternate protein names: VOR; 2-oxoisovalerate oxidoreductase alpha chain; 2-oxoisovalerate-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MVKESVASFTITHERPNAFYDTFERKSELQQQTHYCPGCGHGIVHKLLAKAIDELGIQDRTVLISPVGCSVFAYYYFDVG NVQVAHGRCPAAATAVKRSRPGSIVIGYQGDGDLAAIGTAEIIHAANRCEPITIIFVNNGIYGMTGGQMAPTTPLGKKTT TSPFGREKLNEGSPLHVSEMLNSLDAPVFIERVALGNNKQIMQAAKVIKRAVENQVKGLGFSFVEVLSPCPTIWKMQPVE AQHFIADEMASIFPVGNLRDRTADAPARPAAAPPPALAGLPALLDIADPILETARPPQELDLRVKVAGFGGQGVLMLGEV LAEAGLEAGYEVSWLPSYGPEMRSGTSNCHVRLSHNAIDSPLVSAPNVLLAMNEPSLRKFLPTVEEGGVVFYNGSEIPPG CARHDVRIAAIPFTRIADELGASKVANIVMLGALLEATAILEQDRVVAALRRLVKNPRFFELDLTALARGREELRNSQAD DYLWGV
Sequences:
>Translated_486_residues MVKESVASFTITHERPNAFYDTFERKSELQQQTHYCPGCGHGIVHKLLAKAIDELGIQDRTVLISPVGCSVFAYYYFDVG NVQVAHGRCPAAATAVKRSRPGSIVIGYQGDGDLAAIGTAEIIHAANRCEPITIIFVNNGIYGMTGGQMAPTTPLGKKTT TSPFGREKLNEGSPLHVSEMLNSLDAPVFIERVALGNNKQIMQAAKVIKRAVENQVKGLGFSFVEVLSPCPTIWKMQPVE AQHFIADEMASIFPVGNLRDRTADAPARPAAAPPPALAGLPALLDIADPILETARPPQELDLRVKVAGFGGQGVLMLGEV LAEAGLEAGYEVSWLPSYGPEMRSGTSNCHVRLSHNAIDSPLVSAPNVLLAMNEPSLRKFLPTVEEGGVVFYNGSEIPPG CARHDVRIAAIPFTRIADELGASKVANIVMLGALLEATAILEQDRVVAALRRLVKNPRFFELDLTALARGREELRNSQAD DYLWGV >Mature_486_residues MVKESVASFTITHERPNAFYDTFERKSELQQQTHYCPGCGHGIVHKLLAKAIDELGIQDRTVLISPVGCSVFAYYYFDVG NVQVAHGRCPAAATAVKRSRPGSIVIGYQGDGDLAAIGTAEIIHAANRCEPITIIFVNNGIYGMTGGQMAPTTPLGKKTT TSPFGREKLNEGSPLHVSEMLNSLDAPVFIERVALGNNKQIMQAAKVIKRAVENQVKGLGFSFVEVLSPCPTIWKMQPVE AQHFIADEMASIFPVGNLRDRTADAPARPAAAPPPALAGLPALLDIADPILETARPPQELDLRVKVAGFGGQGVLMLGEV LAEAGLEAGYEVSWLPSYGPEMRSGTSNCHVRLSHNAIDSPLVSAPNVLLAMNEPSLRKFLPTVEEGGVVFYNGSEIPPG CARHDVRIAAIPFTRIADELGASKVANIVMLGALLEATAILEQDRVVAALRRLVKNPRFFELDLTALARGREELRNSQAD DYLWGV
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019752 - InterPro: IPR002869 - InterPro: IPR011766 [H]
Pfam domain/function: PF01558 POR; PF02775 TPP_enzyme_C [H]
EC number: 1.2.7.- [C]
Molecular weight: Translated: 52364; Mature: 52364
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKESVASFTITHERPNAFYDTFERKSELQQQTHYCPGCGHGIVHKLLAKAIDELGIQDR CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC TVLISPVGCSVFAYYYFDVGNVQVAHGRCPAAATAVKRSRPGSIVIGYQGDGDLAAIGTA EEEEECCCCEEEEEEEEECCCEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCEEECCHH EIIHAANRCEPITIIFVNNGIYGMTGGQMAPTTPLGKKTTTSPFGREKLNEGSPLHVSEM HHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEHHHH LNSLDAPVFIERVALGNNKQIMQAAKVIKRAVENQVKGLGFSFVEVLSPCPTIWKMQPVE HHHCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEECCCCC AQHFIADEMASIFPVGNLRDRTADAPARPAAAPPPALAGLPALLDIADPILETARPPQEL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCC DLRVKVAGFGGQGVLMLGEVLAEAGLEAGYEVSWLPSYGPEMRSGTSNCHVRLSHNAIDS CEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCEEEEECCCCCCC PLVSAPNVLLAMNEPSLRKFLPTVEEGGVVFYNGSEIPPGCARHDVRIAAIPFTRIADEL CCCCCCCEEEEECCCHHHHHCCCHHCCCEEEECCCCCCCCCCCCCCEEEECCHHHHHHHH GASKVANIVMLGALLEATAILEQDRVVAALRRLVKNPRFFELDLTALARGREELRNSQAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCC DYLWGV CHHCCC >Mature Secondary Structure MVKESVASFTITHERPNAFYDTFERKSELQQQTHYCPGCGHGIVHKLLAKAIDELGIQDR CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC TVLISPVGCSVFAYYYFDVGNVQVAHGRCPAAATAVKRSRPGSIVIGYQGDGDLAAIGTA EEEEECCCCEEEEEEEEECCCEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCEEECCHH EIIHAANRCEPITIIFVNNGIYGMTGGQMAPTTPLGKKTTTSPFGREKLNEGSPLHVSEM HHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEHHHH LNSLDAPVFIERVALGNNKQIMQAAKVIKRAVENQVKGLGFSFVEVLSPCPTIWKMQPVE HHHCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEECCCCC AQHFIADEMASIFPVGNLRDRTADAPARPAAAPPPALAGLPALLDIADPILETARPPQEL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCC DLRVKVAGFGGQGVLMLGEVLAEAGLEAGYEVSWLPSYGPEMRSGTSNCHVRLSHNAIDS CEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCEEEEECCCCCCC PLVSAPNVLLAMNEPSLRKFLPTVEEGGVVFYNGSEIPPGCARHDVRIAAIPFTRIADEL CCCCCCCEEEEECCCHHHHHCCCHHCCCEEEECCCCCCCCCCCCCCEEEECCHHHHHHHH GASKVANIVMLGALLEATAILEQDRVVAALRRLVKNPRFFELDLTALARGREELRNSQAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCC DYLWGV CHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9108258 [H]