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The map label for this gene is 116620982

Identifier: 116620982

GI number: 116620982

Start: 2317153

End: 2318235

Strand: Reverse

Name: 116620982

Synonym: Acid_1863

Alternate gene names: NA

Gene position: 2318235-2317153 (Counterclockwise)

Preceding gene: 116620983

Following gene: 116620981

Centisome position: 23.26

GC content: 57.34

Gene sequence:

>1083_bases
GTGCTCGACCTAGTGATCGTCCGTGCAATCTTTATCTTTGTTCTAACCATCTGCGCCTATACTCTTCATCCGTTTCATTC
GGACCCGATAGTAGCGGCCGGCGGTGGCGCGTTGTTCGGCGCATGCGTCATTTTCTTCGAGCTGCGTCTCGAACAGGTCA
GCCTGAAACGGTTGATTGGAGCGGCCTTCGGGTCGGTTTTGGGAATTGTGGGAGCGTTTCTGATGTCCCTGGTTCTCAGC
AAGGCGACGGCGGAGCCGTTCGTGCAGGTATCCCTCCTGCTGCTAATGACCTACATCGGGCTGATCGTGGGCGCCAAAAA
GGGCGACATGCTCAACCTGGCCGCCTTGGGCGGCATCTTCGGGGGCGAGAAGTCCTCAAAGAAGACCTTTAAAATTCTCG
ATACCAGTGTGATCATCGACGGCCGCATCGCCGATATCGCGGAGACGGGATTTCTGGACGGCGTCCTGGTAATTCCCCAG
TTCGTGTTACGCGAATTGCAACTGGTGGCCGATTCGGCCGATTCCATGAAGCGCAACCGCGGCCGGCGCGGGCTCGACAT
CCTGCAGCGCATTCAGAAGATGGCGCACCTGACGGTGCAGATTGTGGAAGAAGACTTTCCGCAGGTTCGCGAAGTCGATA
TGAAGCTGATCGAACTCGCCAAGGTCTTCGATTGCAAGGTCATCACCAACGATTTCAATCTCAACAAAGTGGCGCAGCTC
CACGGCGTGGAAGTGCTCAACATCAACGAGCTGGCCAATTCGCTGAAGCCGATCGTGCTGCCGGGCGAAACCATGCGGGT
CTTCATCCTCAAGGAAGGCAAGGAATACGGACAAGGCGTAGCCTACCTGGACGACGGCACGATGGTGGTGGTGGACAACG
CCAAGAAGATGATCTCCAAGACCATAGACATCTCGGTGACCAGCGTGCTGCAGACCACGGCGGGGAAGATGATCTTCGGC
AAATACGATGAGCGCGGCCATGCGGTGGCGGTAGGCGCCGAGCGGCACGACCGTCCGGTGCGCAAGAGCGATCCGCAGCC
GATGACGAATATGCCGCCCGAGAAAACCACGATAGAATCGTAA

Upstream 100 bases:

>100_bases
TATAATCTTGGCGCGGCGTTTATCGCGTCTATTTTCAGGGTCATGTACCGGTTAGTTGGGGTTTTCCCGGATCTTGTACT
CACCCTAAGGGGGTGTTCAC

Downstream 100 bases:

>100_bases
GTACATGAAAGTCGCCGTGATATTACCCGCGGCCGGCCTGGGCACCCGTATGGGAAAAGGCACCGCGGAGAAGGCCGGCA
CCAGCCGCAAGCAATTCATG

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MLDLVIVRAIFIFVLTICAYTLHPFHSDPIVAAGGGALFGACVIFFELRLEQVSLKRLIGAAFGSVLGIVGAFLMSLVLS
KATAEPFVQVSLLLLMTYIGLIVGAKKGDMLNLAALGGIFGGEKSSKKTFKILDTSVIIDGRIADIAETGFLDGVLVIPQ
FVLRELQLVADSADSMKRNRGRRGLDILQRIQKMAHLTVQIVEEDFPQVREVDMKLIELAKVFDCKVITNDFNLNKVAQL
HGVEVLNINELANSLKPIVLPGETMRVFILKEGKEYGQGVAYLDDGTMVVVDNAKKMISKTIDISVTSVLQTTAGKMIFG
KYDERGHAVAVGAERHDRPVRKSDPQPMTNMPPEKTTIES

Sequences:

>Translated_360_residues
MLDLVIVRAIFIFVLTICAYTLHPFHSDPIVAAGGGALFGACVIFFELRLEQVSLKRLIGAAFGSVLGIVGAFLMSLVLS
KATAEPFVQVSLLLLMTYIGLIVGAKKGDMLNLAALGGIFGGEKSSKKTFKILDTSVIIDGRIADIAETGFLDGVLVIPQ
FVLRELQLVADSADSMKRNRGRRGLDILQRIQKMAHLTVQIVEEDFPQVREVDMKLIELAKVFDCKVITNDFNLNKVAQL
HGVEVLNINELANSLKPIVLPGETMRVFILKEGKEYGQGVAYLDDGTMVVVDNAKKMISKTIDISVTSVLQTTAGKMIFG
KYDERGHAVAVGAERHDRPVRKSDPQPMTNMPPEKTTIES
>Mature_360_residues
MLDLVIVRAIFIFVLTICAYTLHPFHSDPIVAAGGGALFGACVIFFELRLEQVSLKRLIGAAFGSVLGIVGAFLMSLVLS
KATAEPFVQVSLLLLMTYIGLIVGAKKGDMLNLAALGGIFGGEKSSKKTFKILDTSVIIDGRIADIAETGFLDGVLVIPQ
FVLRELQLVADSADSMKRNRGRRGLDILQRIQKMAHLTVQIVEEDFPQVREVDMKLIELAKVFDCKVITNDFNLNKVAQL
HGVEVLNINELANSLKPIVLPGETMRVFILKEGKEYGQGVAYLDDGTMVVVDNAKKMISKTIDISVTSVLQTTAGKMIFG
KYDERGHAVAVGAERHDRPVRKSDPQPMTNMPPEKTTIES

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 39315; Mature: 39315

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLVIVRAIFIFVLTICAYTLHPFHSDPIVAAGGGALFGACVIFFELRLEQVSLKRLIG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
AAFGSVLGIVGAFLMSLVLSKATAEPFVQVSLLLLMTYIGLIVGAKKGDMLNLAALGGIF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCC
GGEKSSKKTFKILDTSVIIDGRIADIAETGFLDGVLVIPQFVLRELQLVADSADSMKRNR
CCCCCCCCEEEEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHC
GRRGLDILQRIQKMAHLTVQIVEEDFPQVREVDMKLIELAKVFDCKVITNDFNLNKVAQL
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHH
HGVEVLNINELANSLKPIVLPGETMRVFILKEGKEYGQGVAYLDDGTMVVVDNAKKMISK
CCCEEEEHHHHHHCCCCEEECCCCEEEEEEECCHHHCCCEEEEECCCEEEECCHHHHHHH
TIDISVTSVLQTTAGKMIFGKYDERGHAVAVGAERHDRPVRKSDPQPMTNMPPEKTTIES
HHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDLVIVRAIFIFVLTICAYTLHPFHSDPIVAAGGGALFGACVIFFELRLEQVSLKRLIG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
AAFGSVLGIVGAFLMSLVLSKATAEPFVQVSLLLLMTYIGLIVGAKKGDMLNLAALGGIF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCC
GGEKSSKKTFKILDTSVIIDGRIADIAETGFLDGVLVIPQFVLRELQLVADSADSMKRNR
CCCCCCCCEEEEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHC
GRRGLDILQRIQKMAHLTVQIVEEDFPQVREVDMKLIELAKVFDCKVITNDFNLNKVAQL
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHH
HGVEVLNINELANSLKPIVLPGETMRVFILKEGKEYGQGVAYLDDGTMVVVDNAKKMISK
CCCEEEEHHHHHHCCCCEEECCCCEEEEEEECCHHHCCCEEEEECCCEEEECCHHHHHHH
TIDISVTSVLQTTAGKMIFGKYDERGHAVAVGAERHDRPVRKSDPQPMTNMPPEKTTIES
HHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8885268; 11679669 [H]