| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620961
Identifier: 116620961
GI number: 116620961
Start: 2294328
End: 2294849
Strand: Direct
Name: 116620961
Synonym: Acid_1842
Alternate gene names: NA
Gene position: 2294328-2294849 (Clockwise)
Preceding gene: 116620953
Following gene: 116620964
Centisome position: 23.02
GC content: 64.37
Gene sequence:
>522_bases GTGACATTGCTGCCTGCGCAGTCCTTGCAGCGCAATCGCCTCTCCGTCAGCGGCGGCTGGGGAGAGCAGATCTCGTTTTA CTCCTACGAGCGCCAGAGTGCCCCGGTGCTCGGCGTTTCCTACGCCTTTCGCCCGCTCCGCTGGTTCGAGCTTGAAACCG GCCTCTTCGCCGGCCTTCAGCCAGCGCAGGACCAGTGCGGTGCCCACGGCTGCTTCGACCCCGACGACCGCTACTTCTGG TTACCCTTCGGGGTGCGCTTCGTCGCGCCGATCGCGTGGGGGCGCGTTGAACTTTCCGCAGGCGGCGGCGGGCTCTATGA GAATTATTCGGTAAGCAATGCCAACATCAATGTCCATTCGCGGTCGGGATGGGGCGGCTACTTCGTGGGAGGCGCCGCGG TCGCGATCGACCGCCGCCACCGTTTTTGGCTCGGCGCCACGCCGCGCTTTCTTCTCGTCAACCCAAGGTACGCCCGCGAC CGATGGTTCGTCATCACGGGCGACGTGAGTTTCAGGTTCTAA
Upstream 100 bases:
>100_bases TTTCGTCGCTCATCGATTCTATTTTATACCGCCGTGTAGTTGGCCGCCCCACGCGCACGGTCTTAGCGGTGTGCGAGTGT ATTTGGGCTTTCTTTTTATT
Downstream 100 bases:
>100_bases AATCAGCAACCGCTCCCTCACGGTCGCGGCTCCGATCCGAGCCGCGCGCGTTAGCGAGCGGTTGCTAATTCGCTTTTTAT CTCGCGGTCTTAGTAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTLLPAQSLQRNRLSVSGGWGEQISFYSYERQSAPVLGVSYAFRPLRWFELETGLFAGLQPAQDQCGAHGCFDPDDRYFW LPFGVRFVAPIAWGRVELSAGGGGLYENYSVSNANINVHSRSGWGGYFVGGAAVAIDRRHRFWLGATPRFLLVNPRYARD RWFVITGDVSFRF
Sequences:
>Translated_173_residues MTLLPAQSLQRNRLSVSGGWGEQISFYSYERQSAPVLGVSYAFRPLRWFELETGLFAGLQPAQDQCGAHGCFDPDDRYFW LPFGVRFVAPIAWGRVELSAGGGGLYENYSVSNANINVHSRSGWGGYFVGGAAVAIDRRHRFWLGATPRFLLVNPRYARD RWFVITGDVSFRF >Mature_172_residues TLLPAQSLQRNRLSVSGGWGEQISFYSYERQSAPVLGVSYAFRPLRWFELETGLFAGLQPAQDQCGAHGCFDPDDRYFWL PFGVRFVAPIAWGRVELSAGGGGLYENYSVSNANINVHSRSGWGGYFVGGAAVAIDRRHRFWLGATPRFLLVNPRYARDR WFVITGDVSFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19480; Mature: 19349
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLPAQSLQRNRLSVSGGWGEQISFYSYERQSAPVLGVSYAFRPLRWFELETGLFAGLQ CCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCEEECCC PAQDQCGAHGCFDPDDRYFWLPFGVRFVAPIAWGRVELSAGGGGLYENYSVSNANINVHS CCHHHCCCCCCCCCCCCEEEEECCCEEECEEECCEEEEECCCCCCCCCEEECCCEEEEEC RSGWGGYFVGGAAVAIDRRHRFWLGATPRFLLVNPRYARDRWFVITGDVSFRF CCCCCEEEECCEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECCEEEEC >Mature Secondary Structure TLLPAQSLQRNRLSVSGGWGEQISFYSYERQSAPVLGVSYAFRPLRWFELETGLFAGLQ CCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCEEECCC PAQDQCGAHGCFDPDDRYFWLPFGVRFVAPIAWGRVELSAGGGGLYENYSVSNANINVHS CCHHHCCCCCCCCCCCCEEEEECCCEEECEEECCEEEEECCCCCCCCCEEECCCEEEEEC RSGWGGYFVGGAAVAIDRRHRFWLGATPRFLLVNPRYARDRWFVITGDVSFRF CCCCCEEEECCEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA