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The map label for this gene is ydjE [C]

Identifier: 116620954

GI number: 116620954

Start: 2288030

End: 2289352

Strand: Reverse

Name: ydjE [C]

Synonym: Acid_1835

Alternate gene names: 116620954

Gene position: 2289352-2288030 (Counterclockwise)

Preceding gene: 116620955

Following gene: 116620952

Centisome position: 22.97

GC content: 65.53

Gene sequence:

>1323_bases
ATGGCTGATACCGGCCCGGAGCTGAAGCGCGAACTCGGCCTGCGCGACGTCACGTTGTTCGCGATCGCGTGCATCGTGGG
TACGCGCTGGATCCCGGCGGCGGCGCACGCGGGGCCGGGGTCAGTCACGCTGTGGCTGCTGGCGGCCTTGATGTTCATGG
TGCCGCTGGCAATCGCGGTGGCGGCGCTCTCCGTGAAGTATCCCGGCACCGGCGGCTTCTACCTGTGGACGCGCAACGAT
TTCGGCCGCTGGCACGGCTTCCTGGCCTTCGTCGTCTACTGGATCAGCATCGCATTCTGGTTTCCCAGCGCCGCCATGTT
CTACATGAGCGCCGGCGCATACGCCCTGGGGCCCTCTTATTCCTACCTGGCGAACAGCCGCCCGTTTCTGCTGACGGTTT
CGCTGGTCGCGATCTGGATCGCGCTGGGTACGAACATCGTCGGCATGAAGATCGGCAAGTGGACGCAGAACGTGGGCGCC
CTCTCCACCTGGGTGCTGGGCGGATTGCTGGTGGTGGTCGCCGCGCTGCTTTGGAATCGGAGCGGCCCCGCGACTCCGAT
GAATTTCGCGCCGACCTGGAATTGGGACACGCTCAATTTCTGGTCTACGATCGCATACGCCATGAGCGGCATCGAGATGG
CCGCGCTAGTGGGAGGCGAGATTCGCGATCCGCAAAGGACGCTGCCGCGGGCCGGCTGGATCGCGTCCGGAATCACGGTG
GTTTTCTACGCCGGCACTACGATCGCGCTGCTGGCGATGCTGCGTCCGGAGAGGATCAGCGAGTTGAACGGCCTCGCCGA
GGCCGGTGCGCAGGCCGCGAGCACGCTCCGCGCCGGCTGGCTCTCGCCGCTGATCGCGGTGCTGGTGATGGCGAGCGCGG
TCGGGCAGTTCGGCGGTCTAGGCACGGCAGTCTCGCGCCTGCCCTTCGCGGTGGGCGTGGATAAGATGCTGCCGCCGGCC
TTCGGCAGGGTTCATCCGCGATGGGGCACGCCGCACATTTCCATCCTCGCGCTGGGAATACTGGCATCGTTTCTCCTGGT
CGCGATTCAATTGGGCGACACGATGCGGGTGGCCTATCAGGAGCTGGTCTCGCTGATGGTGATCCTCGGATTTCTGCCGT
ACCTGTACATCTTCGGGAGCGCCTGGAAGACCGGCAAGCGGCTCGGCGCAGTTTCCGGTTGGGCGATCACGCTGCTCGCG
ATCCTGTGTTCCGTGGTGCCCACAGCGGAAGTGAAGAACGTGTGGCTGTTCGAGACCAAGCTCGCGATCGGCACGGTGGG
AGTGATCGCGACCGCGTGGTGGCTGTACCGGCGACGGGCTTAG

Upstream 100 bases:

>100_bases
GGCTATCTGCGCGTGTGGCTGGGCGGCAAGCCGGAGTTTCTCGCCGAGGGATTGCGGCGCATCGGCGTTGAGCTGCGTGC
GGAGATCGGCCGCGGAGCTC

Downstream 100 bases:

>100_bases
CGCGTCCCGAGCAGGGGCGCCAGCGTCTTCATCACCAGCTGCTCCACTTTACGCGCGCCTGCCGCGTTGGGGTGCAGACC
ATCGCGCTGCATCATATCCT

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MADTGPELKRELGLRDVTLFAIACIVGTRWIPAAAHAGPGSVTLWLLAALMFMVPLAIAVAALSVKYPGTGGFYLWTRND
FGRWHGFLAFVVYWISIAFWFPSAAMFYMSAGAYALGPSYSYLANSRPFLLTVSLVAIWIALGTNIVGMKIGKWTQNVGA
LSTWVLGGLLVVVAALLWNRSGPATPMNFAPTWNWDTLNFWSTIAYAMSGIEMAALVGGEIRDPQRTLPRAGWIASGITV
VFYAGTTIALLAMLRPERISELNGLAEAGAQAASTLRAGWLSPLIAVLVMASAVGQFGGLGTAVSRLPFAVGVDKMLPPA
FGRVHPRWGTPHISILALGILASFLLVAIQLGDTMRVAYQELVSLMVILGFLPYLYIFGSAWKTGKRLGAVSGWAITLLA
ILCSVVPTAEVKNVWLFETKLAIGTVGVIATAWWLYRRRA

Sequences:

>Translated_440_residues
MADTGPELKRELGLRDVTLFAIACIVGTRWIPAAAHAGPGSVTLWLLAALMFMVPLAIAVAALSVKYPGTGGFYLWTRND
FGRWHGFLAFVVYWISIAFWFPSAAMFYMSAGAYALGPSYSYLANSRPFLLTVSLVAIWIALGTNIVGMKIGKWTQNVGA
LSTWVLGGLLVVVAALLWNRSGPATPMNFAPTWNWDTLNFWSTIAYAMSGIEMAALVGGEIRDPQRTLPRAGWIASGITV
VFYAGTTIALLAMLRPERISELNGLAEAGAQAASTLRAGWLSPLIAVLVMASAVGQFGGLGTAVSRLPFAVGVDKMLPPA
FGRVHPRWGTPHISILALGILASFLLVAIQLGDTMRVAYQELVSLMVILGFLPYLYIFGSAWKTGKRLGAVSGWAITLLA
ILCSVVPTAEVKNVWLFETKLAIGTVGVIATAWWLYRRRA
>Mature_439_residues
ADTGPELKRELGLRDVTLFAIACIVGTRWIPAAAHAGPGSVTLWLLAALMFMVPLAIAVAALSVKYPGTGGFYLWTRNDF
GRWHGFLAFVVYWISIAFWFPSAAMFYMSAGAYALGPSYSYLANSRPFLLTVSLVAIWIALGTNIVGMKIGKWTQNVGAL
STWVLGGLLVVVAALLWNRSGPATPMNFAPTWNWDTLNFWSTIAYAMSGIEMAALVGGEIRDPQRTLPRAGWIASGITVV
FYAGTTIALLAMLRPERISELNGLAEAGAQAASTLRAGWLSPLIAVLVMASAVGQFGGLGTAVSRLPFAVGVDKMLPPAF
GRVHPRWGTPHISILALGILASFLLVAIQLGDTMRVAYQELVSLMVILGFLPYLYIFGSAWKTGKRLGAVSGWAITLLAI
LCSVVPTAEVKNVWLFETKLAIGTVGVIATAWWLYRRRA

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367353, Length=384, Percent_Identity=27.8645833333333, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21357367, Length=423, Percent_Identity=25.531914893617, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI221331183, Length=355, Percent_Identity=26.1971830985915, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17647653, Length=355, Percent_Identity=26.1971830985915, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24664379, Length=355, Percent_Identity=26.1971830985915, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 47374; Mature: 47242

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTGPELKRELGLRDVTLFAIACIVGTRWIPAAAHAGPGSVTLWLLAALMFMVPLAIAV
CCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AALSVKYPGTGGFYLWTRNDFGRWHGFLAFVVYWISIAFWFPSAAMFYMSAGAYALGPSY
HHHHEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCH
SYLANSRPFLLTVSLVAIWIALGTNIVGMKIGKWTQNVGALSTWVLGGLLVVVAALLWNR
HHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGPATPMNFAPTWNWDTLNFWSTIAYAMSGIEMAALVGGEIRDPQRTLPRAGWIASGITV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHCCCEE
VFYAGTTIALLAMLRPERISELNGLAEAGAQAASTLRAGWLSPLIAVLVMASAVGQFGGL
EEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GTAVSRLPFAVGVDKMLPPAFGRVHPRWGTPHISILALGILASFLLVAIQLGDTMRVAYQ
HHHHHHCCHHHCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ELVSLMVILGFLPYLYIFGSAWKTGKRLGAVSGWAITLLAILCSVVPTAEVKNVWLFETK
HHHHHHHHHHHHHHHHHHHCHHHCCHHHCCCCHHHHHHHHHHHHHCCCCHHCCEEEEEHH
LAIGTVGVIATAWWLYRRRA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADTGPELKRELGLRDVTLFAIACIVGTRWIPAAAHAGPGSVTLWLLAALMFMVPLAIAV
CCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AALSVKYPGTGGFYLWTRNDFGRWHGFLAFVVYWISIAFWFPSAAMFYMSAGAYALGPSY
HHHHEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCH
SYLANSRPFLLTVSLVAIWIALGTNIVGMKIGKWTQNVGALSTWVLGGLLVVVAALLWNR
HHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGPATPMNFAPTWNWDTLNFWSTIAYAMSGIEMAALVGGEIRDPQRTLPRAGWIASGITV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHCCCEE
VFYAGTTIALLAMLRPERISELNGLAEAGAQAASTLRAGWLSPLIAVLVMASAVGQFGGL
EEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GTAVSRLPFAVGVDKMLPPAFGRVHPRWGTPHISILALGILASFLLVAIQLGDTMRVAYQ
HHHHHHCCHHHCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ELVSLMVILGFLPYLYIFGSAWKTGKRLGAVSGWAITLLAILCSVVPTAEVKNVWLFETK
HHHHHHHHHHHHHHHHHHHCHHHCCHHHCCCCHHHHHHHHHHHHHCCCCHHCCEEEEEHH
LAIGTVGVIATAWWLYRRRA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8366052 [H]