Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is ybbP [H]

Identifier: 116620951

GI number: 116620951

Start: 2284107

End: 2286662

Strand: Reverse

Name: ybbP [H]

Synonym: Acid_1832

Alternate gene names: 116620951

Gene position: 2286662-2284107 (Counterclockwise)

Preceding gene: 116620952

Following gene: 116620950

Centisome position: 22.95

GC content: 66.9

Gene sequence:

>2556_bases
ATGAGATCCTCGCTGCCCTGGAGCACCGCGCTGCGCATCGCCTGGCGCGAGACCCGCGCCTCGCGCGCCAAATTCCTGTT
CGTGATTCTCGCAGTGGCGATCGGTGTCGGCTCACTAACAGGTGTGCGCGGCTTCAGCCGCTCCTTCCGCCACATGCTGC
TGCGCGAGGCGCGCACGCTGATGGCCGGCGACATCACGGCACGGGTCTTCGCCCTGCCCAACGCGGAGCAGGAGGCCGCG
CTGCACGATCTCGATGCGCGCGGCGTGCGCCGCACCTGGATCACCGAGACGGTCACGATGGCCTCCTCGAGTACGACGCC
CGACCCGCTGTTGATCTCGGTTAAGGCCGTGGACCCGGCGGCATATCCCTATTACGGAGTGGTCAAACTCAATCCGCCGC
GACCGCTGCGCGGCGCCCTCGACGCCAATTCCGTCGTGGTTTCCGACGACCTGTTAGTACGGCTGAACGTCCATACCGGC
GACACGCTGCACATCGGCGGTCAGGATTTCCGCATCGCCGGCGTGGTCACGAGCGAGCCCGACCGTATGACCGGCAGCCT
CAACGTCGGCCCGCGCGTCATGATCACGCGCGCCGGGCTGGACCGCACCGGGCTGATCAGCACCGGCAGCCGCGCGGCCG
AGCGCTACCTCTTCGCGCTGCCTGCAAGCGGCGGCCCCGATGTTGCCGACGTGCGCGCGGTGCTCAAGCAGGCCTTCCCG
GAGGCCACGATCTCCGACTACCGCGAGACCCATCCGATCATCACCCGCGGCCTGGATCGCGCGACGACATTCCTCAGCCT
GATCGGGCTGATCGCGCTGGTCATCGGCGCTATGGGGGTGGCCAGCGCGATGCACGGCCACCTGCAGCAGAAGCTCGATT
CCATAGCGGTGATGAAGTGTATCGGCGCACGCTCCGCACAGATCATCCGCATCTACGTGGCGCAGACTTTGATGCTCGGG
CTGGCCGGCGGATTGCTCGGCGTCGCATTCGGCGTGCTGGTCTCCGCCGCCTTCCCCGGGCTGATCGCGAAGTATTTCCA
GATCGACGTCGCAGCCTATTGGGATCCGTGGCCCGCGGTGCAAGGCATCGCAATCGCCTGCCTGGTCACGCTGCTGTTCA
CGCTGCCGCCGCTGCTCTCTATCCGCGCCATCCGGCCCGCGTTGATCTTCCGGCGCGATGTGGAGACCGGCCGCGGCGGC
GGCAGGCGGCAGGCGCTGCTGGCTCGCGTCGCGATCCTGATTGGCACGGCGGTGGTCGCGGCCACGGTTACGGAAGGCTC
GCTCAGGGATTCGGTGCGAACGGGAGCCTATTTCACTCTCGGAGTCGCGATCGGGCTCGCGCTGCTCTGGGCCGCGGGGT
GGCTCGCGCTGAAGGGCTTCCGCGCATTTTTGCGACGCTTCGGCGCGCGGCTGCCGGGAGTGCTACGCCACGGCATCGCC
AACCTTTATCGTCCGGGAAACCAGGCGCAGGCCGCGGTGGTCGCACTCGGCGTTGGCGTGATGTTTACGCTCACCGTCTT
CCTGGTGCAGGGCGCGCTGGTGGAGCAGATCCGCGGGTCGGCGCCACCGGGGATGCCCAATGTTTTTCTGCTGGATATCC
CGGGCAATCAGCGGGTGGCGCTCAGCGAGCTGATCCAGAGCCAGCCGGGCGTGAAGGAAGCGCCCGACGTCGCCTTCGCG
GTGGCCGCGCGCATCACCGCGGTCAACGGAGTCCCGATCGAGCAGATTCCGCTGCGCGATTTCAATCGACGCTTCATGCG
CACGCGCACGGTCACATCGCTCGAGGCCATGCCGCCCGACACCGTCATTTTGCAGGGCGCCTGGTGGAAGCCCGGCGATC
ACGAACCGCAGATCTGCGCCAACGAGGAAGCAGCCAAGATTCTCAACCTGAAGCCCGGCTCGGTGGTGGATTGGAATATC
TGGAACCGCACCGTGCGCACGCGCGTGGCTTGCGTGGAGCGCACCGAATCGATCCGGATGAGCGGCCGCTTCGAGTTTCT
GTTCAACGCGGGGCAGCTCGATGGCTTGCCCGCGGTTTATTATGGCAGCGCGCGGGTGCGGCCCGCCGACGTGGTCGGCC
TGCAGCGCGTGGTGTACCAGAAGTTCCCGACGGTGACGGTGGTCAACGTCGCCGACGTGATGCAGATTGTTGAAGACGTA
GTGCAGCGCATCGCGGCGGTGATCCGCTTCATTTCCGGCTTCACGATTTTGGCGGGCGCGGTGATGGTGGCTTCGAGCGT
CGCGGGGACGCGCTTCCGCCGGATGCGCGAGGTGGTGACGCTGAAGACGCTGGGCGCGACGCGACGCCGCATCGCGTGGA
TCTTCTCGGTGGAGTTCATCGCGCTCGGCGCGGTCGCCGGGTTGATGGGCAGTCTGCTGGCCGCCGGGTTCGCCGCGCTG
GTACTGAAGAAGCTGCTCGAGATTGAGTTCCATCCCTCGCTTGGAACGCATACTCTCGCGATCGTGATTGCCGCCGCGGT
GGCCGCCGGCGCGGGCTGGGCCGCTAGTTTCCGCATCCTCGGCAGGAAGCCGCTCGAAATTCTACGCGAGGAATAG

Upstream 100 bases:

>100_bases
GCGAGCAGGGCACCACGATGGTGATGGTGACGCACGAACAAACCCTGGCGGATAGCGCGGACCGCCGCATCGTACTCCAC
GACGGGCTGATTGTAAGTCA

Downstream 100 bases:

>100_bases
GTTAGGATATTTGGATCCGAGGTATTAATGAGACTGTCTCGCCAAATCACCGCTATCGCTCTATCTGTCTGCATGACGGC
AGCCTTTGCACCCGCCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 851; Mature: 851

Protein sequence:

>851_residues
MRSSLPWSTALRIAWRETRASRAKFLFVILAVAIGVGSLTGVRGFSRSFRHMLLREARTLMAGDITARVFALPNAEQEAA
LHDLDARGVRRTWITETVTMASSSTTPDPLLISVKAVDPAAYPYYGVVKLNPPRPLRGALDANSVVVSDDLLVRLNVHTG
DTLHIGGQDFRIAGVVTSEPDRMTGSLNVGPRVMITRAGLDRTGLISTGSRAAERYLFALPASGGPDVADVRAVLKQAFP
EATISDYRETHPIITRGLDRATTFLSLIGLIALVIGAMGVASAMHGHLQQKLDSIAVMKCIGARSAQIIRIYVAQTLMLG
LAGGLLGVAFGVLVSAAFPGLIAKYFQIDVAAYWDPWPAVQGIAIACLVTLLFTLPPLLSIRAIRPALIFRRDVETGRGG
GRRQALLARVAILIGTAVVAATVTEGSLRDSVRTGAYFTLGVAIGLALLWAAGWLALKGFRAFLRRFGARLPGVLRHGIA
NLYRPGNQAQAAVVALGVGVMFTLTVFLVQGALVEQIRGSAPPGMPNVFLLDIPGNQRVALSELIQSQPGVKEAPDVAFA
VAARITAVNGVPIEQIPLRDFNRRFMRTRTVTSLEAMPPDTVILQGAWWKPGDHEPQICANEEAAKILNLKPGSVVDWNI
WNRTVRTRVACVERTESIRMSGRFEFLFNAGQLDGLPAVYYGSARVRPADVVGLQRVVYQKFPTVTVVNVADVMQIVEDV
VQRIAAVIRFISGFTILAGAVMVASSVAGTRFRRMREVVTLKTLGATRRRIAWIFSVEFIALGAVAGLMGSLLAAGFAAL
VLKKLLEIEFHPSLGTHTLAIVIAAAVAAGAGWAASFRILGRKPLEILREE

Sequences:

>Translated_851_residues
MRSSLPWSTALRIAWRETRASRAKFLFVILAVAIGVGSLTGVRGFSRSFRHMLLREARTLMAGDITARVFALPNAEQEAA
LHDLDARGVRRTWITETVTMASSSTTPDPLLISVKAVDPAAYPYYGVVKLNPPRPLRGALDANSVVVSDDLLVRLNVHTG
DTLHIGGQDFRIAGVVTSEPDRMTGSLNVGPRVMITRAGLDRTGLISTGSRAAERYLFALPASGGPDVADVRAVLKQAFP
EATISDYRETHPIITRGLDRATTFLSLIGLIALVIGAMGVASAMHGHLQQKLDSIAVMKCIGARSAQIIRIYVAQTLMLG
LAGGLLGVAFGVLVSAAFPGLIAKYFQIDVAAYWDPWPAVQGIAIACLVTLLFTLPPLLSIRAIRPALIFRRDVETGRGG
GRRQALLARVAILIGTAVVAATVTEGSLRDSVRTGAYFTLGVAIGLALLWAAGWLALKGFRAFLRRFGARLPGVLRHGIA
NLYRPGNQAQAAVVALGVGVMFTLTVFLVQGALVEQIRGSAPPGMPNVFLLDIPGNQRVALSELIQSQPGVKEAPDVAFA
VAARITAVNGVPIEQIPLRDFNRRFMRTRTVTSLEAMPPDTVILQGAWWKPGDHEPQICANEEAAKILNLKPGSVVDWNI
WNRTVRTRVACVERTESIRMSGRFEFLFNAGQLDGLPAVYYGSARVRPADVVGLQRVVYQKFPTVTVVNVADVMQIVEDV
VQRIAAVIRFISGFTILAGAVMVASSVAGTRFRRMREVVTLKTLGATRRRIAWIFSVEFIALGAVAGLMGSLLAAGFAAL
VLKKLLEIEFHPSLGTHTLAIVIAAAVAAGAGWAASFRILGRKPLEILREE
>Mature_851_residues
MRSSLPWSTALRIAWRETRASRAKFLFVILAVAIGVGSLTGVRGFSRSFRHMLLREARTLMAGDITARVFALPNAEQEAA
LHDLDARGVRRTWITETVTMASSSTTPDPLLISVKAVDPAAYPYYGVVKLNPPRPLRGALDANSVVVSDDLLVRLNVHTG
DTLHIGGQDFRIAGVVTSEPDRMTGSLNVGPRVMITRAGLDRTGLISTGSRAAERYLFALPASGGPDVADVRAVLKQAFP
EATISDYRETHPIITRGLDRATTFLSLIGLIALVIGAMGVASAMHGHLQQKLDSIAVMKCIGARSAQIIRIYVAQTLMLG
LAGGLLGVAFGVLVSAAFPGLIAKYFQIDVAAYWDPWPAVQGIAIACLVTLLFTLPPLLSIRAIRPALIFRRDVETGRGG
GRRQALLARVAILIGTAVVAATVTEGSLRDSVRTGAYFTLGVAIGLALLWAAGWLALKGFRAFLRRFGARLPGVLRHGIA
NLYRPGNQAQAAVVALGVGVMFTLTVFLVQGALVEQIRGSAPPGMPNVFLLDIPGNQRVALSELIQSQPGVKEAPDVAFA
VAARITAVNGVPIEQIPLRDFNRRFMRTRTVTSLEAMPPDTVILQGAWWKPGDHEPQICANEEAAKILNLKPGSVVDWNI
WNRTVRTRVACVERTESIRMSGRFEFLFNAGQLDGLPAVYYGSARVRPADVVGLQRVVYQKFPTVTVVNVADVMQIVEDV
VQRIAAVIRFISGFTILAGAVMVASSVAGTRFRRMREVVTLKTLGATRRRIAWIFSVEFIALGAVAGLMGSLLAAGFAAL
VLKKLLEIEFHPSLGTHTLAIVIAAAVAAGAGWAASFRILGRKPLEILREE

Specific function: Unknown

COG id: COG3127

COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1786704, Length=812, Percent_Identity=26.4778325123153, Blast_Score=213, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 91527; Mature: 91527

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSLPWSTALRIAWRETRASRAKFLFVILAVAIGVGSLTGVRGFSRSFRHMLLREARTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
MAGDITARVFALPNAEQEAALHDLDARGVRRTWITETVTMASSSTTPDPLLISVKAVDPA
HHCCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCCEEEEEEECCCC
AYPYYGVVKLNPPRPLRGALDANSVVVSDDLLVRLNVHTGDTLHIGGQDFRIAGVVTSEP
CCCEEEEEEECCCCCCCCCCCCCCEEEECCEEEEEEECCCCEEEECCCCEEEEEEEECCC
DRMTGSLNVGPRVMITRAGLDRTGLISTGSRAAERYLFALPASGGPDVADVRAVLKQAFP
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCEEEEECCCCCCCHHHHHHHHHHHCC
EATISDYRETHPIITRGLDRATTFLSLIGLIALVIGAMGVASAMHGHLQQKLDSIAVMKC
CCHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGARSAQIIRIYVAQTLMLGLAGGLLGVAFGVLVSAAFPGLIAKYFQIDVAAYWDPWPAV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHH
QGIAIACLVTLLFTLPPLLSIRAIRPALIFRRDVETGRGGGRRQALLARVAILIGTAVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ATVTEGSLRDSVRTGAYFTLGVAIGLALLWAAGWLALKGFRAFLRRFGARLPGVLRHGIA
HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NLYRPGNQAQAAVVALGVGVMFTLTVFLVQGALVEQIRGSAPPGMPNVFLLDIPGNQRVA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHH
LSELIQSQPGVKEAPDVAFAVAARITAVNGVPIEQIPLRDFNRRFMRTRTVTSLEAMPPD
HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
TVILQGAWWKPGDHEPQICANEEAAKILNLKPGSVVDWNIWNRTVRTRVACVERTESIRM
CEEEECCCCCCCCCCCCCCCCCHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHEE
SGRFEFLFNAGQLDGLPAVYYGSARVRPADVVGLQRVVYQKFPTVTVVNVADVMQIVEDV
CCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH
VQRIAAVIRFISGFTILAGAVMVASSVAGTRFRRMREVVTLKTLGATRRRIAWIFSVEFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHHHHH
ALGAVAGLMGSLLAAGFAALVLKKLLEIEFHPSLGTHTLAIVIAAAVAAGAGWAASFRIL
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHCC
GRKPLEILREE
CCCCHHHHCCC
>Mature Secondary Structure
MRSSLPWSTALRIAWRETRASRAKFLFVILAVAIGVGSLTGVRGFSRSFRHMLLREARTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
MAGDITARVFALPNAEQEAALHDLDARGVRRTWITETVTMASSSTTPDPLLISVKAVDPA
HHCCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCCEEEEEEECCCC
AYPYYGVVKLNPPRPLRGALDANSVVVSDDLLVRLNVHTGDTLHIGGQDFRIAGVVTSEP
CCCEEEEEEECCCCCCCCCCCCCCEEEECCEEEEEEECCCCEEEECCCCEEEEEEEECCC
DRMTGSLNVGPRVMITRAGLDRTGLISTGSRAAERYLFALPASGGPDVADVRAVLKQAFP
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCEEEEECCCCCCCHHHHHHHHHHHCC
EATISDYRETHPIITRGLDRATTFLSLIGLIALVIGAMGVASAMHGHLQQKLDSIAVMKC
CCHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGARSAQIIRIYVAQTLMLGLAGGLLGVAFGVLVSAAFPGLIAKYFQIDVAAYWDPWPAV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHH
QGIAIACLVTLLFTLPPLLSIRAIRPALIFRRDVETGRGGGRRQALLARVAILIGTAVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ATVTEGSLRDSVRTGAYFTLGVAIGLALLWAAGWLALKGFRAFLRRFGARLPGVLRHGIA
HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NLYRPGNQAQAAVVALGVGVMFTLTVFLVQGALVEQIRGSAPPGMPNVFLLDIPGNQRVA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHH
LSELIQSQPGVKEAPDVAFAVAARITAVNGVPIEQIPLRDFNRRFMRTRTVTSLEAMPPD
HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
TVILQGAWWKPGDHEPQICANEEAAKILNLKPGSVVDWNIWNRTVRTRVACVERTESIRM
CEEEECCCCCCCCCCCCCCCCCHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHEE
SGRFEFLFNAGQLDGLPAVYYGSARVRPADVVGLQRVVYQKFPTVTVVNVADVMQIVEDV
CCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH
VQRIAAVIRFISGFTILAGAVMVASSVAGTRFRRMREVVTLKTLGATRRRIAWIFSVEFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHHHHH
ALGAVAGLMGSLLAAGFAALVLKKLLEIEFHPSLGTHTLAIVIAAAVAAGAGWAASFRIL
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHCC
GRKPLEILREE
CCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]