BacMap

Definition	Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession	NC_008536
Length	9,965,640

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The map label for this gene is fabG [H]

Identifier: 116620903

GI number: 116620903

Start: 2220296

End: 2221138

Strand: Reverse

Name: fabG [H]

Synonym: Acid_1784

Alternate gene names: 116620903

Gene position: 2221138-2220296 (Counterclockwise)

Preceding gene: 116620904

Following gene: 116620899

Centisome position: 22.29

GC content: 66.19

Gene sequence:

>843_bases
ATGGGCGAATCCAAATCGGTGCTGCATCCCGGCCTGCACGGGCGCGTCGCGGTGGTCACGGGAGCCAGCCGCGGGATCGG
CAAGGCACTGGCGATCCGGCTGGCGCAGGCGGGCGCGGATGTCGCGGTGGCAGCGAAGAGCGAGCACTCGACGGAGCGGC
TGCCGGGGAGCATTCACGAAACGGCGGACGCGATCCGCGCGCAGGGTGGGCGCGCGCTGGCTATTCCGACGGACGTTCGC
GATGAAGATGCGATCCGCAATTTGATGGAGCGCACGGTGGCGGAGTTCGGCCGGCTCGACATTCTGGTCAACAATGCGGG
CGCCATCTGGACGCAGAGCATTCTGCAGACTCCGCCCAAGCGCTTCGACCTGATGATGGGAGTGAACGCGCGCGCGGCTT
ACATCGCCTGCTACTATGCCCTGCCCCACATGGTGAAGCAGCAGTGGGGACATGTGCTCAACATGTGTCCGCCGCTCAAC
GAGCGCGCGGCGCCGGGCAAGGTAGCCTATATGATGTCGAAGCTGGGGATGGCGCGGGTAGCGATGGGAGTGGCGGCGGA
GCACGAGCGCGATAACATCGCGGGCAACACGCTGTGGCCGCGATCGATCATCGAGACGCAGGCATCGATCGGCTGGAAGA
TGGCCGACCGCTCGCAATGGCGGACACCCGAGATTGTGTGCGACGCATCGCTCGCGATCTTCGCGCAGGAGCCGCGCACC
TGCACCGGGCGCCAGTGGATCGACGAGGAGGCGCTGACAACGCTCGCGGGAATCACCGACTTCGACCACTACTGGTGCGA
AGGGAGGCCGCCGGAGCGGCCGATCTACATCGACAAGTGGTAG

Upstream 100 bases:

>100_bases
TTACATCCGGGAGTGCTTTCAGGAGTTGGTGAAGGCGTCGCGCCCGAAGAAAGCGCGGAGGGCTTCGGCGGAGCAGGCGG
AACCGGCGTTAGTGTAGAGT

Downstream 100 bases:

>100_bases
CGGTCAGACCGGCTGCGCCTGGCGAAGCCTCAAGTAGGGGCGGAGCTTTTCGAGCGCGGCTTCCGGAGTGAAGCCGTACT
TGGCGCGCAGGGCATCCTGC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MGESKSVLHPGLHGRVAVVTGASRGIGKALAIRLAQAGADVAVAAKSEHSTERLPGSIHETADAIRAQGGRALAIPTDVR
DEDAIRNLMERTVAEFGRLDILVNNAGAIWTQSILQTPPKRFDLMMGVNARAAYIACYYALPHMVKQQWGHVLNMCPPLN
ERAAPGKVAYMMSKLGMARVAMGVAAEHERDNIAGNTLWPRSIIETQASIGWKMADRSQWRTPEIVCDASLAIFAQEPRT
CTGRQWIDEEALTTLAGITDFDHYWCEGRPPERPIYIDKW

Sequences:

>Translated_280_residues
MGESKSVLHPGLHGRVAVVTGASRGIGKALAIRLAQAGADVAVAAKSEHSTERLPGSIHETADAIRAQGGRALAIPTDVR
DEDAIRNLMERTVAEFGRLDILVNNAGAIWTQSILQTPPKRFDLMMGVNARAAYIACYYALPHMVKQQWGHVLNMCPPLN
ERAAPGKVAYMMSKLGMARVAMGVAAEHERDNIAGNTLWPRSIIETQASIGWKMADRSQWRTPEIVCDASLAIFAQEPRT
CTGRQWIDEEALTTLAGITDFDHYWCEGRPPERPIYIDKW
>Mature_279_residues
GESKSVLHPGLHGRVAVVTGASRGIGKALAIRLAQAGADVAVAAKSEHSTERLPGSIHETADAIRAQGGRALAIPTDVRD
EDAIRNLMERTVAEFGRLDILVNNAGAIWTQSILQTPPKRFDLMMGVNARAAYIACYYALPHMVKQQWGHVLNMCPPLNE
RAAPGKVAYMMSKLGMARVAMGVAAEHERDNIAGNTLWPRSIIETQASIGWKMADRSQWRTPEIVCDASLAIFAQEPRTC
TGRQWIDEEALTTLAGITDFDHYWCEGRPPERPIYIDKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254986, Length=273, Percent_Identity=41.025641025641, Blast_Score=195, Evalue=4e-50,
Organism=Homo sapiens, GI4504505, Length=193, Percent_Identity=29.5336787564767, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI209862901, Length=211, Percent_Identity=31.7535545023697, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI19923983, Length=211, Percent_Identity=31.7535545023697, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI19923817, Length=228, Percent_Identity=25.8771929824561, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI40254992, Length=186, Percent_Identity=27.9569892473118, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI7706318, Length=176, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI142976729, Length=162, Percent_Identity=26.5432098765432, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI224922801, Length=169, Percent_Identity=30.1775147928994, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI31542939, Length=147, Percent_Identity=31.9727891156463, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI20149619, Length=209, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI25282469, Length=282, Percent_Identity=22.3404255319149, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1789208, Length=190, Percent_Identity=34.7368421052632, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI87082100, Length=216, Percent_Identity=27.7777777777778, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI87082160, Length=189, Percent_Identity=29.1005291005291, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1790717, Length=243, Percent_Identity=24.2798353909465, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787335, Length=195, Percent_Identity=28.7179487179487, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788459, Length=190, Percent_Identity=27.8947368421053, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI2367175, Length=223, Percent_Identity=29.1479820627803, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787905, Length=133, Percent_Identity=33.8345864661654, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982365, Length=269, Percent_Identity=39.0334572490706, Blast_Score=186, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17558628, Length=257, Percent_Identity=40.4669260700389, Blast_Score=174, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17555612, Length=285, Percent_Identity=29.1228070175439, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17568967, Length=191, Percent_Identity=30.3664921465969, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=202, Percent_Identity=33.1683168316832, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71997099, Length=201, Percent_Identity=32.3383084577114, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=201, Percent_Identity=31.8407960199005, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=171, Percent_Identity=35.0877192982456, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17561402, Length=220, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI193204405, Length=205, Percent_Identity=31.7073170731707, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI86565303, Length=287, Percent_Identity=26.1324041811847, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71994604, Length=185, Percent_Identity=28.1081081081081, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=165, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=169, Percent_Identity=34.3195266272189, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=181, Percent_Identity=25.9668508287293, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=174, Percent_Identity=26.4367816091954, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=149, Percent_Identity=32.2147651006711, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=220, Percent_Identity=25.9090909090909, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=219, Percent_Identity=30.5936073059361, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=189, Percent_Identity=26.984126984127, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=220, Percent_Identity=24.0909090909091, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=215, Percent_Identity=27.4418604651163, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=205, Percent_Identity=24.8780487804878, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=204, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=194, Percent_Identity=28.8659793814433, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=192, Percent_Identity=30.7291666666667, Blast_Score=86, Evalue=6e-18,
Organism=Drosophila melanogaster, GI21357673, Length=259, Percent_Identity=42.4710424710425, Blast_Score=209, Evalue=1e-54,
Organism=Drosophila melanogaster, GI28571526, Length=191, Percent_Identity=35.0785340314136, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21357041, Length=196, Percent_Identity=31.6326530612245, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI18859837, Length=191, Percent_Identity=33.5078534031414, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24644339, Length=187, Percent_Identity=32.0855614973262, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI23397609, Length=194, Percent_Identity=30.9278350515464, Blast_Score=88, Evalue=8e-18,
Organism=Drosophila melanogaster, GI21358495, Length=201, Percent_Identity=30.8457711442786, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24649181, Length=201, Percent_Identity=27.363184079602, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI21355319, Length=199, Percent_Identity=26.6331658291457, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI281364892, Length=191, Percent_Identity=25.130890052356, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 30767; Mature: 30635

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGESKSVLHPGLHGRVAVVTGASRGIGKALAIRLAQAGADVAVAAKSEHSTERLPGSIHE
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHH
TADAIRAQGGRALAIPTDVRDEDAIRNLMERTVAEFGRLDILVNNAGAIWTQSILQTPPK
HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCHH
RFDLMMGVNARAAYIACYYALPHMVKQQWGHVLNMCPPLNERAAPGKVAYMMSKLGMARV
HHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
AMGVAAEHERDNIAGNTLWPRSIIETQASIGWKMADRSQWRTPEIVCDASLAIFAQEPRT
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCEEECCCEEEEECCCCC
CTGRQWIDEEALTTLAGITDFDHYWCEGRPPERPIYIDKW
CCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEECC
>Mature Secondary Structure 
GESKSVLHPGLHGRVAVVTGASRGIGKALAIRLAQAGADVAVAAKSEHSTERLPGSIHE
CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHH
TADAIRAQGGRALAIPTDVRDEDAIRNLMERTVAEFGRLDILVNNAGAIWTQSILQTPPK
HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCHH
RFDLMMGVNARAAYIACYYALPHMVKQQWGHVLNMCPPLNERAAPGKVAYMMSKLGMARV
HHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
AMGVAAEHERDNIAGNTLWPRSIIETQASIGWKMADRSQWRTPEIVCDASLAIFAQEPRT
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCEEECCCEEEEECCCCC
CTGRQWIDEEALTTLAGITDFDHYWCEGRPPERPIYIDKW
CCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9384377; 9534248; 8654983 [H]