| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620885
Identifier: 116620885
GI number: 116620885
Start: 2194819
End: 2195676
Strand: Direct
Name: 116620885
Synonym: Acid_1766
Alternate gene names: NA
Gene position: 2194819-2195676 (Clockwise)
Preceding gene: 116620884
Following gene: 116620887
Centisome position: 22.02
GC content: 52.8
Gene sequence:
>858_bases ATGAAGACACTATTGCTGATGCTTTCCATTCTCATGGTGCCTGCATGCGGTCAACCCCAAGGCACGGTCAACGGAGTTCC CATTCCGAGCAGGGCTTTCTCTACGGGAGGCTTACAAACGCAGGCCGAAGTGGCTTGGCGGCTCAAAAGCAAACGCCCGA TCGAGAAGGAGGATATGGCGGCGATAGAGCGTTCGGTGCAGGCGCAACGCTGCAACAAATTGAAATCGGCGATCAGCGGG GTGTTGCAGGAAGAAGTGATGAAGAACATGGCCATCACGGTCACGCCTGCGGACATTGCCGAATTCCAAAAAACGTCCAA TATTAAACTTCCCGATCCGCAAGCGGAGGCTCGACAGAAGCATGAATATGCGGCGGCGGTTCTGACGGCTTTGGATGCGC AACTCAATAAGCATGAAGATCCGCAGTCCGTATACGACAAGTACCTGAAGACGCACGGCATCACAGAACAGGCGTGGTCC GTGCAATTGCTTTTGGGGCAGACGCCGGAAGGCAAGCAGAGCCTGATCAACCAGTTGAATATGACCCCGGAGACGGTGGC ACAGGCCGCCAAAAATTTCGATTGCTCCTATCAGGTCAAACTCAAGAAAATGAAGGAAAGGATCGACGAGCAGATTTCCC TGTCCGATCCCAAGTTCAAGCAGTATCTGGCCGAGTTCCATCAAGCCGCGGATCAGAACGGAAATTTGAACGGTGGTATG CCAGGAGATCATCTGGAATACCTGCAGGTTCAAAGGCAGGCATACTGGAACGATGTTTACCGCAAGGCACAGGTGGTGAT CAACGATCCGACCATGCAGAACTGCGATCTTTCAGAATTTGGGGTCAGAAGGAACTAG
Upstream 100 bases:
>100_bases TGTGCACCACGAGTTTGTGGATTGGCAGTTCGTCGTCCAGTGCGTATGTGAACCCCGGCTGTTGGTATACGACCCTTCCG TAAAGAAAAGGAGATTTCCG
Downstream 100 bases:
>100_bases CGATCGCTCGCCGGATCGTCGCCCTTGCGCAGCAGCTCCGCGGTATGGATCAGCCCATCGGACTCGACCCGATCGATGGC CGCGTCAATAAACTGCCGCA
Product: Fis family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKTLLLMLSILMVPACGQPQGTVNGVPIPSRAFSTGGLQTQAEVAWRLKSKRPIEKEDMAAIERSVQAQRCNKLKSAISG VLQEEVMKNMAITVTPADIAEFQKTSNIKLPDPQAEARQKHEYAAAVLTALDAQLNKHEDPQSVYDKYLKTHGITEQAWS VQLLLGQTPEGKQSLINQLNMTPETVAQAAKNFDCSYQVKLKKMKERIDEQISLSDPKFKQYLAEFHQAADQNGNLNGGM PGDHLEYLQVQRQAYWNDVYRKAQVVINDPTMQNCDLSEFGVRRN
Sequences:
>Translated_285_residues MKTLLLMLSILMVPACGQPQGTVNGVPIPSRAFSTGGLQTQAEVAWRLKSKRPIEKEDMAAIERSVQAQRCNKLKSAISG VLQEEVMKNMAITVTPADIAEFQKTSNIKLPDPQAEARQKHEYAAAVLTALDAQLNKHEDPQSVYDKYLKTHGITEQAWS VQLLLGQTPEGKQSLINQLNMTPETVAQAAKNFDCSYQVKLKKMKERIDEQISLSDPKFKQYLAEFHQAADQNGNLNGGM PGDHLEYLQVQRQAYWNDVYRKAQVVINDPTMQNCDLSEFGVRRN >Mature_285_residues MKTLLLMLSILMVPACGQPQGTVNGVPIPSRAFSTGGLQTQAEVAWRLKSKRPIEKEDMAAIERSVQAQRCNKLKSAISG VLQEEVMKNMAITVTPADIAEFQKTSNIKLPDPQAEARQKHEYAAAVLTALDAQLNKHEDPQSVYDKYLKTHGITEQAWS VQLLLGQTPEGKQSLINQLNMTPETVAQAAKNFDCSYQVKLKKMKERIDEQISLSDPKFKQYLAEFHQAADQNGNLNGGM PGDHLEYLQVQRQAYWNDVYRKAQVVINDPTMQNCDLSEFGVRRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31945; Mature: 31945
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLLLMLSILMVPACGQPQGTVNGVPIPSRAFSTGGLQTQAEVAWRLKSKRPIEKEDMA CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCHHHHH AIERSVQAQRCNKLKSAISGVLQEEVMKNMAITVTPADIAEFQKTSNIKLPDPQAEARQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHH HEYAAAVLTALDAQLNKHEDPQSVYDKYLKTHGITEQAWSVQLLLGQTPEGKQSLINQLN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHEEEEEECCCCCHHHHHHHHHC MTPETVAQAAKNFDCSYQVKLKKMKERIDEQISLSDPKFKQYLAEFHQAADQNGNLNGGM CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC PGDHLEYLQVQRQAYWNDVYRKAQVVINDPTMQNCDLSEFGVRRN CCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHCCCCCC >Mature Secondary Structure MKTLLLMLSILMVPACGQPQGTVNGVPIPSRAFSTGGLQTQAEVAWRLKSKRPIEKEDMA CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCHHHHH AIERSVQAQRCNKLKSAISGVLQEEVMKNMAITVTPADIAEFQKTSNIKLPDPQAEARQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHH HEYAAAVLTALDAQLNKHEDPQSVYDKYLKTHGITEQAWSVQLLLGQTPEGKQSLINQLN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHEEEEEECCCCCHHHHHHHHHC MTPETVAQAAKNFDCSYQVKLKKMKERIDEQISLSDPKFKQYLAEFHQAADQNGNLNGGM CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC PGDHLEYLQVQRQAYWNDVYRKAQVVINDPTMQNCDLSEFGVRRN CCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA