| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620861
Identifier: 116620861
GI number: 116620861
Start: 2163764
End: 2165521
Strand: Direct
Name: 116620861
Synonym: Acid_1742
Alternate gene names: NA
Gene position: 2163764-2165521 (Clockwise)
Preceding gene: 116620859
Following gene: 116620862
Centisome position: 21.71
GC content: 61.38
Gene sequence:
>1758_bases ATGCTTCGGGTGACCAGGCGCACCGTGTTGAATTGGCTTGCGTTGCCGGCTGCCGGGCTGTGGGGACAGGGGATGTCTTC CCGCGGCGTGAAGGCGCCGGCGCGCGGCAAACCCTCGGGGCTGCCATTCCGCTCCACGTTCACCGATGTTGCGCGCCAGG CCGGTTTGAGCGCGATCTGCGTGTCCGGGCACGCGGAGCACAACGACTACATCATCGAGAGCATGGGGTGCGGCGCGGCC TTTCTGGACTACGACAACGACGGATGGCTGGATATTTTCGTGCTGTGCGGTTCGCGATCCGGCGGCCCTCCGCCGGGCGC GTCAAACCGCCTGTATAAGAACAATCGCGATGGGACCTTTACCGATGTTACGGAAAAGGCAGGGTTACTGCTCAGCGGAT ATGCCTACGGCGTGACGGTGGGGGACTATAACAACGACGGCTTCGACGATCTGTTCCTCACTTACTGGGGGCAGAACGTG CTGTACCGCAATAATGGAGACGGCACCTTCACCGATGTTACGAAGCAGGCAGGGCTCATGAATACCACGCCGCGCTTCGG AACAGGATGCGCGTTCGTCGATTACGACCGGGACGGCAGGCTGGATCTGTTCGTATCGAATTACCTGGTGTTTGACCCTA AGAGTGTGCCGCGCGCGGGCGAGACCGGGAGCTGCGACTACAAGGGAGTGCCGGTGGCATGCGGGCCGAAGGGACTGCCC TACGGACATCACAAGCTGTATCAAAACAACGGCGATGGCACCTTTCGCGATGTCACGGCGGCGGCGGGGATCGACAAAGT CGATGGGGGGTACGGGCTGACCGTCGCGGCCGCCGATTTCGACAATGACGGCTGGCCGGACATTTATGTGGCCTGCGATT CCACGCCCAGCCTGTTCTTCCACAACAATCGCGATGGGACATTTACGGAAGAAGGTCTGGAGCGGGGCGTCGCGCTCAGC GAAGATGGAATGGAGCAGGCCGGGATGGGGCTGGGCGTTGGCGATTTCGCGTTAGATGGCAGCCTGCACGTGGTGAAGAC TCACTTCAGCAGCGATACACCGGCTGTGTATGCCAATGACGGGAAGGGGCACTTTCGCGATGTCACGCTGCGGTCGGGGC TCGCGGTGGAGACGCGCTATGTAAGTTGGGGCGCGGGCGTGGCGGATTTGGATAATGACGGCAATCCCGATATTTTCTGG GTTACGGGCGGCATCTATCCGGAGCTCCAGAAGAAGGATCCGGATTCGCCGCTGAAGACGCCGCGCGTGGTTTTTCGGAA TCTGGGAGGAGGGCGTTTCGAGGAGTTGATGGGCCAGGAGGGGCCGGGAATCGAGGCCGTTCACGCCAGCCGCGGGTGTG CCTTTGGGGATTTCGACAACGACGGGGATATGGACATTCTGATCGTCAATCAGAATGAGCCGCCTTCTTTGCTGCGCAAC GATGTGAGCGGCGGCTATCACTGGATCAAGGTGAAGTTGATCGGAGTGCAATCGAATCGCGGGGCGATCGGCGGGCGGGT TACGGCGCGATACGGCGGCAAGGTGCAGGCCCAGGAGGTGCTGAGCCAGTCCTCTTACTTGTCTGTGAACGACAGCCGCC TGCACTTTGGTCTGGGCGCGGCCGCGACGGTGGACCTGGAGGTTCGCTGGCCGTTGGGCGGGATCGAGAAACTCAGCGGG GTGGCGGCCGACCAGTTGATCTATGTTACGGAAGGTTCCGGTATTACCCGCTCGGAACGTTTCAAGAGCAGCCGATGA
Upstream 100 bases:
>100_bases GCGCTGGAGAGCGCAAACAAAGCGAAGACGGGTCGCATAGAAAAAGTCTACCGGAAGCAGAGGGGAGCTTGCCCGCGACC GGGAACTATAATGGAGCGGG
Downstream 100 bases:
>100_bases ATTTTCGAGTGGTCTCCGCCCTGATCTGTTGCGGTCTGGCGCTGGCGCAGAAGAAGCCGGTGGAAGAAGCCTGGGATCTG CTTGCCGCGGGCAAGCGGGA
Product: ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat-Containing Protein; FG-GAP Repeat Protein; ASPIC/UnbV; TPR Repeat-Containing Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Aspic/Unbv; Rhs Family Protein; Aspic/Unbv Domain Protein; Integrin-Like Protein; Protein Containing FG-GAP Repeats; Secreted Protein Containing FG-GAP Repeats; Fg-Gap Repeat Protein; ASPIC And UnbV Domain Protein; FG-GAP Repeat Domain-Containing Protein; RTX Family Protein Exoprotein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein; Acid Secreted Protein ASPIC; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MLRVTRRTVLNWLALPAAGLWGQGMSSRGVKAPARGKPSGLPFRSTFTDVARQAGLSAICVSGHAEHNDYIIESMGCGAA FLDYDNDGWLDIFVLCGSRSGGPPPGASNRLYKNNRDGTFTDVTEKAGLLLSGYAYGVTVGDYNNDGFDDLFLTYWGQNV LYRNNGDGTFTDVTKQAGLMNTTPRFGTGCAFVDYDRDGRLDLFVSNYLVFDPKSVPRAGETGSCDYKGVPVACGPKGLP YGHHKLYQNNGDGTFRDVTAAAGIDKVDGGYGLTVAAADFDNDGWPDIYVACDSTPSLFFHNNRDGTFTEEGLERGVALS EDGMEQAGMGLGVGDFALDGSLHVVKTHFSSDTPAVYANDGKGHFRDVTLRSGLAVETRYVSWGAGVADLDNDGNPDIFW VTGGIYPELQKKDPDSPLKTPRVVFRNLGGGRFEELMGQEGPGIEAVHASRGCAFGDFDNDGDMDILIVNQNEPPSLLRN DVSGGYHWIKVKLIGVQSNRGAIGGRVTARYGGKVQAQEVLSQSSYLSVNDSRLHFGLGAAATVDLEVRWPLGGIEKLSG VAADQLIYVTEGSGITRSERFKSSR
Sequences:
>Translated_585_residues MLRVTRRTVLNWLALPAAGLWGQGMSSRGVKAPARGKPSGLPFRSTFTDVARQAGLSAICVSGHAEHNDYIIESMGCGAA FLDYDNDGWLDIFVLCGSRSGGPPPGASNRLYKNNRDGTFTDVTEKAGLLLSGYAYGVTVGDYNNDGFDDLFLTYWGQNV LYRNNGDGTFTDVTKQAGLMNTTPRFGTGCAFVDYDRDGRLDLFVSNYLVFDPKSVPRAGETGSCDYKGVPVACGPKGLP YGHHKLYQNNGDGTFRDVTAAAGIDKVDGGYGLTVAAADFDNDGWPDIYVACDSTPSLFFHNNRDGTFTEEGLERGVALS EDGMEQAGMGLGVGDFALDGSLHVVKTHFSSDTPAVYANDGKGHFRDVTLRSGLAVETRYVSWGAGVADLDNDGNPDIFW VTGGIYPELQKKDPDSPLKTPRVVFRNLGGGRFEELMGQEGPGIEAVHASRGCAFGDFDNDGDMDILIVNQNEPPSLLRN DVSGGYHWIKVKLIGVQSNRGAIGGRVTARYGGKVQAQEVLSQSSYLSVNDSRLHFGLGAAATVDLEVRWPLGGIEKLSG VAADQLIYVTEGSGITRSERFKSSR >Mature_585_residues MLRVTRRTVLNWLALPAAGLWGQGMSSRGVKAPARGKPSGLPFRSTFTDVARQAGLSAICVSGHAEHNDYIIESMGCGAA FLDYDNDGWLDIFVLCGSRSGGPPPGASNRLYKNNRDGTFTDVTEKAGLLLSGYAYGVTVGDYNNDGFDDLFLTYWGQNV LYRNNGDGTFTDVTKQAGLMNTTPRFGTGCAFVDYDRDGRLDLFVSNYLVFDPKSVPRAGETGSCDYKGVPVACGPKGLP YGHHKLYQNNGDGTFRDVTAAAGIDKVDGGYGLTVAAADFDNDGWPDIYVACDSTPSLFFHNNRDGTFTEEGLERGVALS EDGMEQAGMGLGVGDFALDGSLHVVKTHFSSDTPAVYANDGKGHFRDVTLRSGLAVETRYVSWGAGVADLDNDGNPDIFW VTGGIYPELQKKDPDSPLKTPRVVFRNLGGGRFEELMGQEGPGIEAVHASRGCAFGDFDNDGDMDILIVNQNEPPSLLRN DVSGGYHWIKVKLIGVQSNRGAIGGRVTARYGGKVQAQEVLSQSSYLSVNDSRLHFGLGAAATVDLEVRWPLGGIEKLSG VAADQLIYVTEGSGITRSERFKSSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=463, Percent_Identity=26.133909287257, Blast_Score=86, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62804; Mature: 62804
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRVTRRTVLNWLALPAAGLWGQGMSSRGVKAPARGKPSGLPFRSTFTDVARQAGLSAIC CCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE VSGHAEHNDYIIESMGCGAAFLDYDNDGWLDIFVLCGSRSGGPPPGASNRLYKNNRDGTF ECCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCE TDVTEKAGLLLSGYAYGVTVGDYNNDGFDDLFLTYWGQNVLYRNNGDGTFTDVTKQAGLM EEHHHHCCEEEECEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEHHHHHCCCC NTTPRFGTGCAFVDYDRDGRLDLFVSNYLVFDPKSVPRAGETGSCDYKGVPVACGPKGLP CCCCCCCCCEEEEEECCCCCEEEEEECEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCC YGHHKLYQNNGDGTFRDVTAAAGIDKVDGGYGLTVAAADFDNDGWPDIYVACDSTPSLFF CCCCEEEEECCCCCEEEEHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEE HNNRDGTFTEEGLERGVALSEDGMEQAGMGLGVGDFALDGSLHVVKTHFSSDTPAVYAND ECCCCCCCCHHHHHCCCEECCCCHHHCCCCCCCCCEEECCCEEEEEEECCCCCCEEEEEC GKGHFRDVTLRSGLAVETRYVSWGAGVADLDNDGNPDIFWVTGGIYPELQKKDPDSPLKT CCCCEEEEEECCCCEEEEEEEECCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCC PRVVFRNLGGGRFEELMGQEGPGIEAVHASRGCAFGDFDNDGDMDILIVNQNEPPSLLRN HHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH DVSGGYHWIKVKLIGVQSNRGAIGGRVTARYGGKVQAQEVLSQSSYLSVNDSRLHFGLGA CCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCEEEHHHHHCCCCEEEECCCEEEEECCC AATVDLEVRWPLGGIEKLSGVAADQLIYVTEGSGITRSERFKSSR EEEEEEEEECCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHCCCC >Mature Secondary Structure MLRVTRRTVLNWLALPAAGLWGQGMSSRGVKAPARGKPSGLPFRSTFTDVARQAGLSAIC CCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE VSGHAEHNDYIIESMGCGAAFLDYDNDGWLDIFVLCGSRSGGPPPGASNRLYKNNRDGTF ECCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCE TDVTEKAGLLLSGYAYGVTVGDYNNDGFDDLFLTYWGQNVLYRNNGDGTFTDVTKQAGLM EEHHHHCCEEEECEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEHHHHHCCCC NTTPRFGTGCAFVDYDRDGRLDLFVSNYLVFDPKSVPRAGETGSCDYKGVPVACGPKGLP CCCCCCCCCEEEEEECCCCCEEEEEECEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCC YGHHKLYQNNGDGTFRDVTAAAGIDKVDGGYGLTVAAADFDNDGWPDIYVACDSTPSLFF CCCCEEEEECCCCCEEEEHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEE HNNRDGTFTEEGLERGVALSEDGMEQAGMGLGVGDFALDGSLHVVKTHFSSDTPAVYAND ECCCCCCCCHHHHHCCCEECCCCHHHCCCCCCCCCEEECCCEEEEEEECCCCCCEEEEEC GKGHFRDVTLRSGLAVETRYVSWGAGVADLDNDGNPDIFWVTGGIYPELQKKDPDSPLKT CCCCEEEEEECCCCEEEEEEEECCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCC PRVVFRNLGGGRFEELMGQEGPGIEAVHASRGCAFGDFDNDGDMDILIVNQNEPPSLLRN HHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH DVSGGYHWIKVKLIGVQSNRGAIGGRVTARYGGKVQAQEVLSQSSYLSVNDSRLHFGLGA CCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCEEEHHHHHCCCCEEEECCCEEEEECCC AATVDLEVRWPLGGIEKLSGVAADQLIYVTEGSGITRSERFKSSR EEEEEEEEECCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA