| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620709
Identifier: 116620709
GI number: 116620709
Start: 1949961
End: 1951475
Strand: Direct
Name: 116620709
Synonym: Acid_1589
Alternate gene names: NA
Gene position: 1949961-1951475 (Clockwise)
Preceding gene: 116620707
Following gene: 116620711
Centisome position: 19.57
GC content: 62.18
Gene sequence:
>1515_bases ATGGTTCTCAACAACGGTGCTACTCCCGCCAAACACCAGATTGAGACCATGGTGGGAGGAGTGGCTGCGCTCGATTACGA TGGCGATGGTTTGCTCGATCTTTTCTTTACCAACGGAGCAAGCCAACCCGGCCTTCAGAAATCCAATGCGGGGTGGTGGA ATCGTCTCTACCGCAACCGCGGCAACGGCGTATTTGAAGACGTCACCGCGAAGGCCGGATTGGAGGGCGAGGGCTTCTGT TTTGGCGCCGCAGCCGCCGACTACGACAACGACGGGCATCCGGACCTTTTTGTCGCCGGAGTAAAGCGCAACGCGCTGTA TCGAAATCGCGGCGACGGCACCTTCGAGGACGTGACCGCGAAGGCGGGCATTCACGGAGAGCCGTGGTCCGTGGCGGCGG GCTGGTTCGACTACGACGGCGATGGTTTCCTGGACCTTTTCGTCGTCAACTACGTCGCGTGGGATCCCGCGACGGAACCG GTCTGCAAGGATCCCGCTTCGGGCGGTGTCGCGCACTGCCATCCCAAGTTCTACAACGGCCTGCCGAATACTCTCTATCA CAACAACGGCAATGGCACGTTCACCGACGTCTCGGCCGCGTCCGGGATCGGCGCCCATACGGGCAAGGGAATGAGCGTCG CCTTTGCCGATTATGATGGCGATGGCCGGACCGATATTTTTGTCACGAACGATACGCTGCCGAATATGCTGTTCCACAAT GAGGGCGGCGGACATTTTACGGAAATCGCGGTGAGGGCGGGCGTCGCGTTCAACGATGATGGAAGGGCTCTGTCTTCGAT GGGGGTCGATTTCCGCGATCTCGACAACGACGGGCGGCCCGACCTATTCCTGACCGCGCTGGTTAACGAGACCTATCCGC TGTACCGCAATTTGGGCAAGGGACTCTTTGCGGATTTCACGTATCGTTCCCGCGCCGGCGCCGCCACCGTGACTACTACC GGCTGGGCCACGGGGATGTACGACTTCAACAACGACGGGCGCAAGGATATCTTCTCCGCCAACGGCGACCTCAATGAAAA TGCTGAAGCCCTCTCCGGAAGGGCCGCGCGCCAGACCAACACTGTGCTGGTGCAGCAGGCCGACGGAACCTTCGAGCCCA CGCCCGCGGGTCACGCCGCGCGCTATCGCGGAGCCGCATTCGGCGATTTCGATAACGACGGCCGGATCGATGCGGTGGTC ACGCGTATCGGCGAGAAGCCGCTCTTTCTCCGCAATACCAGCGCCTCCGCGAATCACTGGCTGGGTCTGAAACTGGTGGG ACGGCGCAGCAATCGCGATGGCATCGGCGCCTGGATCAAGCTCCGGACGACGTCCGGCGAGCAGTGGAACCAGGCGACCA CCGCGGTGGGGTACGCCAGTTCGAGCGACGTGCGGGTTCACTTCGGACTCGGCGCCGCTGCGCGCGCGACGGTTGAGGTC CACTGGCCTTCCGGCACGGTCCAGCAACTAGGCGAAGTGGCGGCGGATCGTTATTTGACGGTGCGCGAGCCCTGA
Upstream 100 bases:
>100_bases GATCAGAACATGGGTGGTGGCTCTCGGGCTGGCCGCTACCGTACAACCCGCGACCGCGCCTGTATCGTTCGCGGATGGAA GTGCGCGCGCCGGGCTGGAG
Downstream 100 bases:
>100_bases CGCAGGTGCTCTTCGGCGGCTTCCGTCCTGCCAAGGCGAAGGTAGACTTTGCCGAGCAGCAGGTGAGCGCGGGGCGCCCG GGGATCCAGCGCGATGGACT
Product: ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; ASPIC/UnbV; FG-GAP Repeat Protein; FG-GAP Repeat-Containing Protein; TPR Repeat-Containing Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Aspic/Unbv; Aspic/Unbv Domain Protein; Integrin-Like Protein; ASPIC And UnbV Domain Protein; FG-GAP Repeat Domain-Containing Protein; RTX Family Protein Exoprotein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein; Acid Secreted Protein ASPIC; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MVLNNGATPAKHQIETMVGGVAALDYDGDGLLDLFFTNGASQPGLQKSNAGWWNRLYRNRGNGVFEDVTAKAGLEGEGFC FGAAAADYDNDGHPDLFVAGVKRNALYRNRGDGTFEDVTAKAGIHGEPWSVAAGWFDYDGDGFLDLFVVNYVAWDPATEP VCKDPASGGVAHCHPKFYNGLPNTLYHNNGNGTFTDVSAASGIGAHTGKGMSVAFADYDGDGRTDIFVTNDTLPNMLFHN EGGGHFTEIAVRAGVAFNDDGRALSSMGVDFRDLDNDGRPDLFLTALVNETYPLYRNLGKGLFADFTYRSRAGAATVTTT GWATGMYDFNNDGRKDIFSANGDLNENAEALSGRAARQTNTVLVQQADGTFEPTPAGHAARYRGAAFGDFDNDGRIDAVV TRIGEKPLFLRNTSASANHWLGLKLVGRRSNRDGIGAWIKLRTTSGEQWNQATTAVGYASSSDVRVHFGLGAAARATVEV HWPSGTVQQLGEVAADRYLTVREP
Sequences:
>Translated_504_residues MVLNNGATPAKHQIETMVGGVAALDYDGDGLLDLFFTNGASQPGLQKSNAGWWNRLYRNRGNGVFEDVTAKAGLEGEGFC FGAAAADYDNDGHPDLFVAGVKRNALYRNRGDGTFEDVTAKAGIHGEPWSVAAGWFDYDGDGFLDLFVVNYVAWDPATEP VCKDPASGGVAHCHPKFYNGLPNTLYHNNGNGTFTDVSAASGIGAHTGKGMSVAFADYDGDGRTDIFVTNDTLPNMLFHN EGGGHFTEIAVRAGVAFNDDGRALSSMGVDFRDLDNDGRPDLFLTALVNETYPLYRNLGKGLFADFTYRSRAGAATVTTT GWATGMYDFNNDGRKDIFSANGDLNENAEALSGRAARQTNTVLVQQADGTFEPTPAGHAARYRGAAFGDFDNDGRIDAVV TRIGEKPLFLRNTSASANHWLGLKLVGRRSNRDGIGAWIKLRTTSGEQWNQATTAVGYASSSDVRVHFGLGAAARATVEV HWPSGTVQQLGEVAADRYLTVREP >Mature_504_residues MVLNNGATPAKHQIETMVGGVAALDYDGDGLLDLFFTNGASQPGLQKSNAGWWNRLYRNRGNGVFEDVTAKAGLEGEGFC FGAAAADYDNDGHPDLFVAGVKRNALYRNRGDGTFEDVTAKAGIHGEPWSVAAGWFDYDGDGFLDLFVVNYVAWDPATEP VCKDPASGGVAHCHPKFYNGLPNTLYHNNGNGTFTDVSAASGIGAHTGKGMSVAFADYDGDGRTDIFVTNDTLPNMLFHN EGGGHFTEIAVRAGVAFNDDGRALSSMGVDFRDLDNDGRPDLFLTALVNETYPLYRNLGKGLFADFTYRSRAGAATVTTT GWATGMYDFNNDGRKDIFSANGDLNENAEALSGRAARQTNTVLVQQADGTFEPTPAGHAARYRGAAFGDFDNDGRIDAVV TRIGEKPLFLRNTSASANHWLGLKLVGRRSNRDGIGAWIKLRTTSGEQWNQATTAVGYASSSDVRVHFGLGAAARATVEV HWPSGTVQQLGEVAADRYLTVREP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=497, Percent_Identity=25.9557344064386, Blast_Score=88, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54029; Mature: 54029
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLNNGATPAKHQIETMVGGVAALDYDGDGLLDLFFTNGASQPGLQKSNAGWWNRLYRNR CEECCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHC GNGVFEDVTAKAGLEGEGFCFGAAAADYDNDGHPDLFVAGVKRNALYRNRGDGTFEDVTA CCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCEEECCCCCCHHHHHC KAGIHGEPWSVAAGWFDYDGDGFLDLFVVNYVAWDPATEPVCKDPASGGVAHCHPKFYNG CCCCCCCCCEEEECEEECCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCEEECCHHHHCC LPNTLYHNNGNGTFTDVSAASGIGAHTGKGMSVAFADYDGDGRTDIFVTNDTLPNMLFHN CCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEC EGGGHFTEIAVRAGVAFNDDGRALSSMGVDFRDLDNDGRPDLFLTALVNETYPLYRNLGK CCCCEEEEEEEEECEEECCCCCCHHHCCCCCEECCCCCCCCEEEEEECCCCCHHHHHHCC GLFADFTYRSRAGAATVTTTGWATGMYDFNNDGRKDIFSANGDLNENAEALSGRAARQTN CCEEECEECCCCCCEEEEECCCEEEEEECCCCCCCCEEECCCCCCCCHHHHCCCCCCCCC TVLVQQADGTFEPTPAGHAARYRGAAFGDFDNDGRIDAVVTRIGEKPLFLRNTSASANHW EEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCE LGLKLVGRRSNRDGIGAWIKLRTTSGEQWNQATTAVGYASSSDVRVHFGLGAAARATVEV EEEEEEECCCCCCCCEEEEEEEECCCCCCCCHHEEEEECCCCCEEEEEECCCCEEEEEEE HWPSGTVQQLGEVAADRYLTVREP ECCCCHHHHHHHHHHCCEEEEECC >Mature Secondary Structure MVLNNGATPAKHQIETMVGGVAALDYDGDGLLDLFFTNGASQPGLQKSNAGWWNRLYRNR CEECCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHC GNGVFEDVTAKAGLEGEGFCFGAAAADYDNDGHPDLFVAGVKRNALYRNRGDGTFEDVTA CCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCEEECCCCCCHHHHHC KAGIHGEPWSVAAGWFDYDGDGFLDLFVVNYVAWDPATEPVCKDPASGGVAHCHPKFYNG CCCCCCCCCEEEECEEECCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCEEECCHHHHCC LPNTLYHNNGNGTFTDVSAASGIGAHTGKGMSVAFADYDGDGRTDIFVTNDTLPNMLFHN CCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEC EGGGHFTEIAVRAGVAFNDDGRALSSMGVDFRDLDNDGRPDLFLTALVNETYPLYRNLGK CCCCEEEEEEEEECEEECCCCCCHHHCCCCCEECCCCCCCCEEEEEECCCCCHHHHHHCC GLFADFTYRSRAGAATVTTTGWATGMYDFNNDGRKDIFSANGDLNENAEALSGRAARQTN CCEEECEECCCCCCEEEEECCCEEEEEECCCCCCCCEEECCCCCCCCHHHHCCCCCCCCC TVLVQQADGTFEPTPAGHAARYRGAAFGDFDNDGRIDAVVTRIGEKPLFLRNTSASANHW EEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCE LGLKLVGRRSNRDGIGAWIKLRTTSGEQWNQATTAVGYASSSDVRVHFGLGAAARATVEV EEEEEEECCCCCCCCEEEEEEEECCCCCCCCHHEEEEECCCCCEEEEEECCCCEEEEEEE HWPSGTVQQLGEVAADRYLTVREP ECCCCHHHHHHHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA