| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is thrC [H]
Identifier: 116620679
GI number: 116620679
Start: 1916940
End: 1918247
Strand: Direct
Name: thrC [H]
Synonym: Acid_1559
Alternate gene names: 116620679
Gene position: 1916940-1918247 (Clockwise)
Preceding gene: 116620676
Following gene: 116620683
Centisome position: 19.24
GC content: 61.85
Gene sequence:
>1308_bases ATGCCTGCGGAACTAGCCTGTTTTGAAGAGCGGTGCCGCGCGCGGTTTCCGATCACCGAAGTCCTCTACAATTGCCCGCA CTGCGGCGGTCTGTTGGAAGCGGTGTACGGCAAACCGGCGCAATCCGCCGATGAGCTCAAATGCCTGTGGCGCACCCGCC GCACGTCCAACCACCCGTTGGATCAGAGTGGAGTGTGGCGCTATCGCGAGTTCATCCCGTTCCTGGACGACTACGCACAC GCGGTCACGCTCCGCGAAGGCTGCACCCCGCTGCTGCCGGGCCGCTTGGCCGCGGAGTACGGCGGCCTGGACGCGCTCGT CTTCAAGCACCAGGGCTTCAACCCCACCGGGTCCTTCAAGGACAACGGCATGACCTGCGGCGCGTCGCAGGCCATGCGGC TCGGGATGACGCGGGTGGCCTGCGTCTCCACCGGGAATACGTCGGCCTCCATGGCGGCCTACGCGAGCGCGGCCGGCCTG CAGCCCGTGATCTTCATTCCACATGGCAACATCTCCTTCGGCAAACTCGCGCAGGCGCTGGAGTACGGCGCCAAAACCAT CCAGGTGGAAGCGAATTTCGATCAGATTCTGGCGCTGGTGCGGCAGGTAGCCGAGCGCCTGGGAATCTATCTGCTGAACT CGATCAACCCCTTCCGCATCGAAGGCCAAAAAACGATCATGGCCGAGATGCTGGATCAGCGCGATTGGAACGTGCCGGAC TGGGTGGTGCTGCCGGGCGGCAACCTCGGCAATACCTCGGCCTTCGGAAAAGGCCTCCGCGAACTCAAGGAACTCGGCCT GATCGACCGGCTGCCGCGCCTGGCCGTGATCCAGGCCGAGGGCTCTGCGCCGTTCTACGACCTGATGCAGGGGCGGGATC GAACCCACCTGACACCAGTCAGCCATCCGGAGACGCTGGCCACCGCGATCAAAATCGGCGATCCGGTTTCCTGGCCCAAG GCCCTGCACGAAGTGACCACGTCGGGCGGCGTGGTGGAGAAGGTGAGCGAGCAGGAGATTGCGGACGCCAAAGCAGTGAT CGGGCGTTGCGGAATCGGTTGTGAGCCGGCTTCCGCGGCCACCCTGGCTGGAATTCGCAAGCTAACTGCTTCTGGAATAA TGCGTTCCGACTCGGATATCGTGGCAGTTCTTACCGGAAATGTCTTAAAAGACCCTAGCTATATCCACCAGTACCACACA GGGGTATTAAAGACGGACGGGGGCAGCCCGATCCGGCCTTCCTTCGGAAATCCACCGGTAGTATTACCCAATGACTCAGC GAAAATAGCTGATTTTCTAAGTGTTTAA
Upstream 100 bases:
>100_bases AGGGCGAAACCTTCGGGCCGCGCGGGCATGGGCACCTCGCGCACCGTTACCGCACCCTTTTCCAGGTGTACTGCGAGCAT CCCCTTTATAATAGATCTTC
Downstream 100 bases:
>100_bases CTCGAAATTACCCCCATTTGGGGTTAGCCGATACCCGCAAAAAGGATTAACGCGCACCTTGTCAGGCCTATTGTACATTC TTAGACGTTCTGGTACATCT
Product: L-threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MPAELACFEERCRARFPITEVLYNCPHCGGLLEAVYGKPAQSADELKCLWRTRRTSNHPLDQSGVWRYREFIPFLDDYAH AVTLREGCTPLLPGRLAAEYGGLDALVFKHQGFNPTGSFKDNGMTCGASQAMRLGMTRVACVSTGNTSASMAAYASAAGL QPVIFIPHGNISFGKLAQALEYGAKTIQVEANFDQILALVRQVAERLGIYLLNSINPFRIEGQKTIMAEMLDQRDWNVPD WVVLPGGNLGNTSAFGKGLRELKELGLIDRLPRLAVIQAEGSAPFYDLMQGRDRTHLTPVSHPETLATAIKIGDPVSWPK ALHEVTTSGGVVEKVSEQEIADAKAVIGRCGIGCEPASAATLAGIRKLTASGIMRSDSDIVAVLTGNVLKDPSYIHQYHT GVLKTDGGSPIRPSFGNPPVVLPNDSAKIADFLSV
Sequences:
>Translated_435_residues MPAELACFEERCRARFPITEVLYNCPHCGGLLEAVYGKPAQSADELKCLWRTRRTSNHPLDQSGVWRYREFIPFLDDYAH AVTLREGCTPLLPGRLAAEYGGLDALVFKHQGFNPTGSFKDNGMTCGASQAMRLGMTRVACVSTGNTSASMAAYASAAGL QPVIFIPHGNISFGKLAQALEYGAKTIQVEANFDQILALVRQVAERLGIYLLNSINPFRIEGQKTIMAEMLDQRDWNVPD WVVLPGGNLGNTSAFGKGLRELKELGLIDRLPRLAVIQAEGSAPFYDLMQGRDRTHLTPVSHPETLATAIKIGDPVSWPK ALHEVTTSGGVVEKVSEQEIADAKAVIGRCGIGCEPASAATLAGIRKLTASGIMRSDSDIVAVLTGNVLKDPSYIHQYHT GVLKTDGGSPIRPSFGNPPVVLPNDSAKIADFLSV >Mature_434_residues PAELACFEERCRARFPITEVLYNCPHCGGLLEAVYGKPAQSADELKCLWRTRRTSNHPLDQSGVWRYREFIPFLDDYAHA VTLREGCTPLLPGRLAAEYGGLDALVFKHQGFNPTGSFKDNGMTCGASQAMRLGMTRVACVSTGNTSASMAAYASAAGLQ PVIFIPHGNISFGKLAQALEYGAKTIQVEANFDQILALVRQVAERLGIYLLNSINPFRIEGQKTIMAEMLDQRDWNVPDW VVLPGGNLGNTSAFGKGLRELKELGLIDRLPRLAVIQAEGSAPFYDLMQGRDRTHLTPVSHPETLATAIKIGDPVSWPKA LHEVTTSGGVVEKVSEQEIADAKAVIGRCGIGCEPASAATLAGIRKLTASGIMRSDSDIVAVLTGNVLKDPSYIHQYHTG VLKTDGGSPIRPSFGNPPVVLPNDSAKIADFLSV
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 46946; Mature: 46815
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAELACFEERCRARFPITEVLYNCPHCGGLLEAVYGKPAQSADELKCLWRTRRTSNHPL CCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC DQSGVWRYREFIPFLDDYAHAVTLREGCTPLLPGRLAAEYGGLDALVFKHQGFNPTGSFK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCC DNGMTCGASQAMRLGMTRVACVSTGNTSASMAAYASAAGLQPVIFIPHGNISFGKLAQAL CCCCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH EYGAKTIQVEANFDQILALVRQVAERLGIYLLNSINPFRIEGQKTIMAEMLDQRDWNVPD HCCCEEEEEECCHHHHHHHHHHHHHHHCEEEECCCCCEEECCHHHHHHHHHHCCCCCCCC WVVLPGGNLGNTSAFGKGLRELKELGLIDRLPRLAVIQAEGSAPFYDLMQGRDRTHLTPV EEEECCCCCCCHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCHHHHHCCCCCCCCCCC SHPETLATAIKIGDPVSWPKALHEVTTSGGVVEKVSEQEIADAKAVIGRCGIGCEPASAA CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH TLAGIRKLTASGIMRSDSDIVAVLTGNVLKDPSYIHQYHTGVLKTDGGSPIRPSFGNPPV HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCE VLPNDSAKIADFLSV EECCCCHHHHHHHCC >Mature Secondary Structure PAELACFEERCRARFPITEVLYNCPHCGGLLEAVYGKPAQSADELKCLWRTRRTSNHPL CCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC DQSGVWRYREFIPFLDDYAHAVTLREGCTPLLPGRLAAEYGGLDALVFKHQGFNPTGSFK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCC DNGMTCGASQAMRLGMTRVACVSTGNTSASMAAYASAAGLQPVIFIPHGNISFGKLAQAL CCCCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH EYGAKTIQVEANFDQILALVRQVAERLGIYLLNSINPFRIEGQKTIMAEMLDQRDWNVPD HCCCEEEEEECCHHHHHHHHHHHHHHHCEEEECCCCCEEECCHHHHHHHHHHCCCCCCCC WVVLPGGNLGNTSAFGKGLRELKELGLIDRLPRLAVIQAEGSAPFYDLMQGRDRTHLTPV EEEECCCCCCCHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCHHHHHCCCCCCCCCCC SHPETLATAIKIGDPVSWPKALHEVTTSGGVVEKVSEQEIADAKAVIGRCGIGCEPASAA CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH TLAGIRKLTASGIMRSDSDIVAVLTGNVLKDPSYIHQYHTGVLKTDGGSPIRPSFGNPPV HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCE VLPNDSAKIADFLSV EECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]