| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620659
Identifier: 116620659
GI number: 116620659
Start: 1890636
End: 1892267
Strand: Direct
Name: 116620659
Synonym: Acid_1539
Alternate gene names: NA
Gene position: 1890636-1892267 (Clockwise)
Preceding gene: 116620658
Following gene: 116620660
Centisome position: 18.97
GC content: 61.21
Gene sequence:
>1632_bases ATGAAGCCCCTCGTGGTGCTCTTGGCCGCTGCTGCCGTTATGCCTGACTTGAACCAACTCAAAGAGATGAGCGCCCGCTT TGCGCCCGTCACCCTGAAGTACGACTCGTCGAAGCTCTCTCCCGGCGATCGCCAGGCTCTTGCCAAACTAGTGGACGCCG CGCATGTCCTCAACACGCTTTTCATGGACCAGCTATGGAGCGGCAATCGCGAACTCTACGCCCGCCTTCAGAAGGACACC ACACCGCTAGGCAAGCAGCGCCTCCATTACTTCTGGCTCAACAAAGGCCCGTGGAGCGACCTCGATGCGCACGCCGCCTT CATCCCCGGCGTCCCGGAACGCAAGCCTCCGGGCGCGAATTTCTATCCCGAGGATATGACCCGCGAGGAGTTCGAGGCTT GGGTCAAGACGCTCTCCCCGTCCGCGCGCGAACAGGCCATCGGCTTCTTCAGCGTCATCCGGCGCGGCGCCAAAAGACAA CTCACGCAAATCCCATATTCCAAGGCCTACGAGGCCGACCTGAAGAAGGCCGCCGCCTTGCTGCGCGAAGCTGCCGCGCT AACCGGCAACGCCTCGCTCAAGAAATTCCTCAGCCTGCGCGCCGACGCCTTCCTCTCCAACGACTATTACGCGAGCGACA TCGCCTGGATGGATCTGGACGCGCCTCTCGATATCACCATCGGTCCCTACGAAACCTACAATGACGAGTTGTTCGGCTAT AAGGCCGGCTTCGAAGCCTACATCACCATCCGCGACGAAGAGGAGACCAACAAACTCAAGACCGTCGCCGCGCACCTGCA GGAAGTCGAGAACAACCTGCCGATCGACGCGCGCTATCGCAATCCGAAACTCGGCGCCTCCGCGCCCATCCGCGTCGTCA ACGAAGTCTACGCATCCGGGGACGGTGCGCACGGCGTTCGTACCGCGGCTTTCAATCTGCCCAACGACGAGCGCGTGATC AGCCAAAAGGGCAGTGCGCGCATCATGCTGAAGAACATTCAGGAGGCCAAGTTCGCCGCCAACCTGATCCCCATTTCCGC GCACCTCCTGCCCAAGGCCGCGCAGGAAGACCTCAGCTTCAACTATTTCTTCACCCACATCCTGGCTCACGAACTCAGCC ACGGCATCGGTCCGCATCAGATCCAGGTGGCTGGCCGTGCCACCACGCCGCGCCAGGAATTGAAGGAACTCTACAGCGCC ATCGAAGAAGCCAAGGCCGATATCACCGGCTTATTCATGCTCGAGTATCTCTACGACCACAAGCTCATGAACGGTCCCAA CTACGAGCGCCAACTCTACACCACGTTCCTCGCCTCGGCCTTCCGCTCCGTCCGCTTCGGCGTCACGGAGGCGCACGGTA AGGGCATGGCGCTGCAATTCAACTACCTCACGGACAAGGGCGCGTTCGTCGTCAATCCCGACGGCACCTTCACTGTCGAT GTCGCCAAGATGAAAACCGGAGTCCGCGACCTGACCCACGACCTTCTCACCATCGAAGCCGAGGGCAACTACGCCGCCGC GAAGAAGATGCTCGACACCCTCGCCGTGATCCGCCCCGCGATGCAGCGGGCGCTCGATGGGCTCAAGACGGTACCCACCG ATATCGACCCCACCAGCGAGAGCAACGAGTAG
Upstream 100 bases:
>100_bases TGCGGCTTGCCGCCTTTCAGGCGGCTTCTGCGGAGAGCCGCGTCACCTCAATCCGAGCCGCTACCATCAGAAAGCGATCT ACAAATGGGACAATATCCCC
Downstream 100 bases:
>100_bases CTCATGCGCCGATTCGCCTGTATCCTCCTGCTTGCCGCCTGTGCCTGTGCACAGGATCGCCATCCCATCAGCGGCCGCAA ATATGCGGGCGTCATGGGAC
Product: MutT/NUDIX family protein
Products: NA
Alternate protein names: MutT/NUDIX Family Protein; Orphan Protein; Zn-Dependent Hydrolase; MutT/Nudix Family Protein; Peptidase; Membrane Attached Peptidase; TPR Repeat-Containing Protein; M49 Family Peptidase; DipeptidyL-Peptidase III
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MKPLVVLLAAAAVMPDLNQLKEMSARFAPVTLKYDSSKLSPGDRQALAKLVDAAHVLNTLFMDQLWSGNRELYARLQKDT TPLGKQRLHYFWLNKGPWSDLDAHAAFIPGVPERKPPGANFYPEDMTREEFEAWVKTLSPSAREQAIGFFSVIRRGAKRQ LTQIPYSKAYEADLKKAAALLREAAALTGNASLKKFLSLRADAFLSNDYYASDIAWMDLDAPLDITIGPYETYNDELFGY KAGFEAYITIRDEEETNKLKTVAAHLQEVENNLPIDARYRNPKLGASAPIRVVNEVYASGDGAHGVRTAAFNLPNDERVI SQKGSARIMLKNIQEAKFAANLIPISAHLLPKAAQEDLSFNYFFTHILAHELSHGIGPHQIQVAGRATTPRQELKELYSA IEEAKADITGLFMLEYLYDHKLMNGPNYERQLYTTFLASAFRSVRFGVTEAHGKGMALQFNYLTDKGAFVVNPDGTFTVD VAKMKTGVRDLTHDLLTIEAEGNYAAAKKMLDTLAVIRPAMQRALDGLKTVPTDIDPTSESNE
Sequences:
>Translated_543_residues MKPLVVLLAAAAVMPDLNQLKEMSARFAPVTLKYDSSKLSPGDRQALAKLVDAAHVLNTLFMDQLWSGNRELYARLQKDT TPLGKQRLHYFWLNKGPWSDLDAHAAFIPGVPERKPPGANFYPEDMTREEFEAWVKTLSPSAREQAIGFFSVIRRGAKRQ LTQIPYSKAYEADLKKAAALLREAAALTGNASLKKFLSLRADAFLSNDYYASDIAWMDLDAPLDITIGPYETYNDELFGY KAGFEAYITIRDEEETNKLKTVAAHLQEVENNLPIDARYRNPKLGASAPIRVVNEVYASGDGAHGVRTAAFNLPNDERVI SQKGSARIMLKNIQEAKFAANLIPISAHLLPKAAQEDLSFNYFFTHILAHELSHGIGPHQIQVAGRATTPRQELKELYSA IEEAKADITGLFMLEYLYDHKLMNGPNYERQLYTTFLASAFRSVRFGVTEAHGKGMALQFNYLTDKGAFVVNPDGTFTVD VAKMKTGVRDLTHDLLTIEAEGNYAAAKKMLDTLAVIRPAMQRALDGLKTVPTDIDPTSESNE >Mature_543_residues MKPLVVLLAAAAVMPDLNQLKEMSARFAPVTLKYDSSKLSPGDRQALAKLVDAAHVLNTLFMDQLWSGNRELYARLQKDT TPLGKQRLHYFWLNKGPWSDLDAHAAFIPGVPERKPPGANFYPEDMTREEFEAWVKTLSPSAREQAIGFFSVIRRGAKRQ LTQIPYSKAYEADLKKAAALLREAAALTGNASLKKFLSLRADAFLSNDYYASDIAWMDLDAPLDITIGPYETYNDELFGY KAGFEAYITIRDEEETNKLKTVAAHLQEVENNLPIDARYRNPKLGASAPIRVVNEVYASGDGAHGVRTAAFNLPNDERVI SQKGSARIMLKNIQEAKFAANLIPISAHLLPKAAQEDLSFNYFFTHILAHELSHGIGPHQIQVAGRATTPRQELKELYSA IEEAKADITGLFMLEYLYDHKLMNGPNYERQLYTTFLASAFRSVRFGVTEAHGKGMALQFNYLTDKGAFVVNPDGTFTVD VAKMKTGVRDLTHDLLTIEAEGNYAAAKKMLDTLAVIRPAMQRALDGLKTVPTDIDPTSESNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60411; Mature: 60411
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLVVLLAAAAVMPDLNQLKEMSARFAPVTLKYDSSKLSPGDRQALAKLVDAAHVLNTL CCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH FMDQLWSGNRELYARLQKDTTPLGKQRLHYFWLNKGPWSDLDAHAAFIPGVPERKPPGAN HHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCC FYPEDMTREEFEAWVKTLSPSAREQAIGFFSVIRRGAKRQLTQIPYSKAYEADLKKAAAL CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LREAAALTGNASLKKFLSLRADAFLSNDYYASDIAWMDLDAPLDITIGPYETYNDELFGY HHHHHHHCCCHHHHHHHHHHHHHHCCCCCEECCEEEEECCCCCEEEECCCCCCCCCCEEE KAGFEAYITIRDEEETNKLKTVAAHLQEVENNLPIDARYRNPKLGASAPIRVVNEVYASG ECCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCC DGAHGVRTAAFNLPNDERVISQKGSARIMLKNIQEAKFAANLIPISAHLLPKAAQEDLSF CCCCCEEEEEECCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHEEHHHHHCCHHHHHCCCH NYFFTHILAHELSHGIGPHQIQVAGRATTPRQELKELYSAIEEAKADITGLFMLEYLYDH HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLMNGPNYERQLYTTFLASAFRSVRFGVTEAHGKGMALQFNYLTDKGAFVVNPDGTFTVD HHCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEEECCCCEEECCCCCEEEE VAKMKTGVRDLTHDLLTIEAEGNYAAAKKMLDTLAVIRPAMQRALDGLKTVPTDIDPTSE HHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SNE CCC >Mature Secondary Structure MKPLVVLLAAAAVMPDLNQLKEMSARFAPVTLKYDSSKLSPGDRQALAKLVDAAHVLNTL CCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH FMDQLWSGNRELYARLQKDTTPLGKQRLHYFWLNKGPWSDLDAHAAFIPGVPERKPPGAN HHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCC FYPEDMTREEFEAWVKTLSPSAREQAIGFFSVIRRGAKRQLTQIPYSKAYEADLKKAAAL CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LREAAALTGNASLKKFLSLRADAFLSNDYYASDIAWMDLDAPLDITIGPYETYNDELFGY HHHHHHHCCCHHHHHHHHHHHHHHCCCCCEECCEEEEECCCCCEEEECCCCCCCCCCEEE KAGFEAYITIRDEEETNKLKTVAAHLQEVENNLPIDARYRNPKLGASAPIRVVNEVYASG ECCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCC DGAHGVRTAAFNLPNDERVISQKGSARIMLKNIQEAKFAANLIPISAHLLPKAAQEDLSF CCCCCEEEEEECCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHEEHHHHHCCHHHHHCCCH NYFFTHILAHELSHGIGPHQIQVAGRATTPRQELKELYSAIEEAKADITGLFMLEYLYDH HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLMNGPNYERQLYTTFLASAFRSVRFGVTEAHGKGMALQFNYLTDKGAFVVNPDGTFTVD HHCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEEECCCCEEECCCCCEEEE VAKMKTGVRDLTHDLLTIEAEGNYAAAKKMLDTLAVIRPAMQRALDGLKTVPTDIDPTSE HHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SNE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA