| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620584
Identifier: 116620584
GI number: 116620584
Start: 1793846
End: 1795111
Strand: Reverse
Name: 116620584
Synonym: Acid_1463
Alternate gene names: NA
Gene position: 1795111-1793846 (Counterclockwise)
Preceding gene: 116620585
Following gene: 116620583
Centisome position: 18.01
GC content: 60.82
Gene sequence:
>1266_bases TTGGTACGACACCAGCCCACAGGGTTAGGGACCGGGTCGCAACAGCCCAGTCCGCCTGGTCACATTTTCATCGCCAGAGG GGTCGCTGGCCCATACGCTGGGGACATGAAGATACTTGTTCGTTTGTGTGTGTGCCTGCTGCCGGCACTTTCGATTGCGC AGGGCGCTGGACCGATCACGATCAGCATGACGGCCGAGCACTGGCAGGCCAAAGAGAACGCGGAGTTCCTGCGGCAGCTG GGTTTTTATCACGGCTTGATGCGAGTGAACAGCGGCAAGGCGGCACTCAAAGACATCGCGTTCAGCGACGGAACGATCGA GTTCGATGTGAATACGTTCGGACGCGGCATGCCCGGAATCGCGTTCCGGCAGCAGGACGAAAACAACTTCGAGCTCTTAT ACCTGAGGCCGGATCCGAATTGTCCCGCCTTCTCGGCGTGTATACAATACACGCCGCAGACTCATGGCGTGATGCTGTGG GACCTCTTTCCGCAGTACCAGGCGAGGGCTCCGCTCCGGGAGAGCGGGTGGAACCACATCAAGATGGTGGTATCGGGCCG GCGGATGAAAGTATTCGTGAACGATGCACCCACGCCCACGCTGGAGGTCGGCAGGTTGGAGGGGGATGCGATGAACGGCG GCCTGCACTTGAAGGGACCGGCCACGTTCGCCAATATGGTGATCACTCCGGGGGCGGTGGAAGGGCTTTCCGCGGAGGCG GCCGGAGATCCGCTGGATGGGGACGGCGGCCTGGTCCGGAATTGGCGGCTCTCCAAGTTTTCCGCGCTGGCGAATGGAAA GGAGCCGTTGTATTCCGAAATGCCCGGAGCTTCGGCGGAATGGCAGCCGATTCGCGCGGAGAGGAGGGGCCTGGTGAATA TCAGCCGCGTGTTCGGCAAACCGCTGCCCGAGCAAACCCGGGCGGTGGCGTGGCTGAAGACGACGATCGCTTCGGACAGG AAGCAAGCGAAGAAGGTTGAGATTGGATGGACGCGCGAGATGTGGGTATTCGTGAATGGGAAGCTGGTGTATACGGACCA GAATTTCTTTGAAGTGGACTCAGCGAGAAAGGCTCCCGACGGGCGATGTTCGCTGGAGAATGGCGGTTTCACGCTGCCCC TGGAAGCGGGCGATAATGAGGTCGCGGTGGCACTCGCGAACAATTACTTCGGATGGGGGCTGATGCTGCGTCTGGCTGAT ACGGAGGGGGCTCACCTCGCGGCAGCCATGACGGTGGAGGAGACGGGGCAAGGTGGACCTAGATAA
Upstream 100 bases:
>100_bases CGCTCAACCTGCTGCATCCCGAGCATATTCCGCTGGAGATGGAGGCAGAGACCGGCCGGGCAAGCCGCTGGAATACACTG CGCGCCCTGCGGGTGCTCGG
Downstream 100 bases:
>100_bases CCCTGGTGGAAAAATTCGACCGGTGCTCTTCGGCTTTCTTGGCTGGAGCGCGATCGGACTGGTTTTTTCGATTCCAGGCA TCCGGACCAGCGATCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MVRHQPTGLGTGSQQPSPPGHIFIARGVAGPYAGDMKILVRLCVCLLPALSIAQGAGPITISMTAEHWQAKENAEFLRQL GFYHGLMRVNSGKAALKDIAFSDGTIEFDVNTFGRGMPGIAFRQQDENNFELLYLRPDPNCPAFSACIQYTPQTHGVMLW DLFPQYQARAPLRESGWNHIKMVVSGRRMKVFVNDAPTPTLEVGRLEGDAMNGGLHLKGPATFANMVITPGAVEGLSAEA AGDPLDGDGGLVRNWRLSKFSALANGKEPLYSEMPGASAEWQPIRAERRGLVNISRVFGKPLPEQTRAVAWLKTTIASDR KQAKKVEIGWTREMWVFVNGKLVYTDQNFFEVDSARKAPDGRCSLENGGFTLPLEAGDNEVAVALANNYFGWGLMLRLAD TEGAHLAAAMTVEETGQGGPR
Sequences:
>Translated_421_residues MVRHQPTGLGTGSQQPSPPGHIFIARGVAGPYAGDMKILVRLCVCLLPALSIAQGAGPITISMTAEHWQAKENAEFLRQL GFYHGLMRVNSGKAALKDIAFSDGTIEFDVNTFGRGMPGIAFRQQDENNFELLYLRPDPNCPAFSACIQYTPQTHGVMLW DLFPQYQARAPLRESGWNHIKMVVSGRRMKVFVNDAPTPTLEVGRLEGDAMNGGLHLKGPATFANMVITPGAVEGLSAEA AGDPLDGDGGLVRNWRLSKFSALANGKEPLYSEMPGASAEWQPIRAERRGLVNISRVFGKPLPEQTRAVAWLKTTIASDR KQAKKVEIGWTREMWVFVNGKLVYTDQNFFEVDSARKAPDGRCSLENGGFTLPLEAGDNEVAVALANNYFGWGLMLRLAD TEGAHLAAAMTVEETGQGGPR >Mature_421_residues MVRHQPTGLGTGSQQPSPPGHIFIARGVAGPYAGDMKILVRLCVCLLPALSIAQGAGPITISMTAEHWQAKENAEFLRQL GFYHGLMRVNSGKAALKDIAFSDGTIEFDVNTFGRGMPGIAFRQQDENNFELLYLRPDPNCPAFSACIQYTPQTHGVMLW DLFPQYQARAPLRESGWNHIKMVVSGRRMKVFVNDAPTPTLEVGRLEGDAMNGGLHLKGPATFANMVITPGAVEGLSAEA AGDPLDGDGGLVRNWRLSKFSALANGKEPLYSEMPGASAEWQPIRAERRGLVNISRVFGKPLPEQTRAVAWLKTTIASDR KQAKKVEIGWTREMWVFVNGKLVYTDQNFFEVDSARKAPDGRCSLENGGFTLPLEAGDNEVAVALANNYFGWGLMLRLAD TEGAHLAAAMTVEETGQGGPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45827; Mature: 45827
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRHQPTGLGTGSQQPSPPGHIFIARGVAGPYAGDMKILVRLCVCLLPALSIAQGAGPIT CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE ISMTAEHWQAKENAEFLRQLGFYHGLMRVNSGKAALKDIAFSDGTIEFDVNTFGRGMPGI EEEEHHHHCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHEECCCEEEEECHHCCCCCCCC AFRQQDENNFELLYLRPDPNCPAFSACIQYTPQTHGVMLWDLFPQYQARAPLRESGWNHI EEEECCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHCCCHHHCCCCEE KMVVSGRRMKVFVNDAPTPTLEVGRLEGDAMNGGLHLKGPATFANMVITPGAVEGLSAEA EEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCC AGDPLDGDGGLVRNWRLSKFSALANGKEPLYSEMPGASAEWQPIRAERRGLVNISRVFGK CCCCCCCCCCEEEEEECHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHCCCEEEHHHHCC PLPEQTRAVAWLKTTIASDRKQAKKVEIGWTREMWVFVNGKLVYTDQNFFEVDSARKAPD CCCHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEEECCEEEEECCCEEECCCCCCCCC GRCSLENGGFTLPLEAGDNEVAVALANNYFGWGLMLRLADTEGAHLAAAMTVEETGQGGP CCEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCC R C >Mature Secondary Structure MVRHQPTGLGTGSQQPSPPGHIFIARGVAGPYAGDMKILVRLCVCLLPALSIAQGAGPIT CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE ISMTAEHWQAKENAEFLRQLGFYHGLMRVNSGKAALKDIAFSDGTIEFDVNTFGRGMPGI EEEEHHHHCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHEECCCEEEEECHHCCCCCCCC AFRQQDENNFELLYLRPDPNCPAFSACIQYTPQTHGVMLWDLFPQYQARAPLRESGWNHI EEEECCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHCCCHHHCCCCEE KMVVSGRRMKVFVNDAPTPTLEVGRLEGDAMNGGLHLKGPATFANMVITPGAVEGLSAEA EEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCC AGDPLDGDGGLVRNWRLSKFSALANGKEPLYSEMPGASAEWQPIRAERRGLVNISRVFGK CCCCCCCCCCEEEEEECHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHCCCEEEHHHHCC PLPEQTRAVAWLKTTIASDRKQAKKVEIGWTREMWVFVNGKLVYTDQNFFEVDSARKAPD CCCHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEEECCEEEEECCCEEECCCCCCCCC GRCSLENGGFTLPLEAGDNEVAVALANNYFGWGLMLRLADTEGAHLAAAMTVEETGQGGP CCEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA