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The map label for this gene is 116620536

Identifier: 116620536

GI number: 116620536

Start: 1741966

End: 1742913

Strand: Direct

Name: 116620536

Synonym: Acid_1414

Alternate gene names: NA

Gene position: 1741966-1742913 (Clockwise)

Preceding gene: 116620535

Following gene: 116620538

Centisome position: 17.48

GC content: 58.12

Gene sequence:

>948_bases
ATGGATCATCCGATATTATTTTCGTTGTGCGCGTTCCTGATGCTGATGCTCATCCTCAGCTGGGTCGGATACCGTCTGAT
CTACAAACCGGGAAAGTTCCTCCGTCAGTTGGGCAACCCGGTCATCACTAACGCCTCCAAACAACGCATCATCGAAGAGG
GCGGTGAGCCCGAAGCCAGCGCTCTGGTTACGGTGTTGCATCAAATCGGCTCGCGGGTTCCCTCCTCGGACGCGGAAGTC
GCCAACCTGAAGGTTGATCTGATTCGCGCGGGTTTCCGCGGAGAGAACGCGCTGGCCGTCTTCTACGGCGTCCGCATTTT
GACCACGCTGGGCATGCTCATTCTCTGCGTCATGATGGAAGCCCGCATGCCACCCAACCCGGTAATGCAACTCGGCCTCA
TGGGTTCGGGAATCTGCGCGGGCTGGATCCTGCCCCGGTTCTTCCTCGAGAAGAGAGTTGCCAAGCGCCAGGAAACGCTC
CGCCTGTCGCTGCCCGACGCGCTCGATCTGTTGGTGGTATCCATCGAAGCCGGGCTTGGCCTCGACCAAGCCATCCAGCA
CGTGGCGCGCGAGTTGTACGCCAGCCATCCGCAACTGAGCGACGAAATGCAGCTGGTCACTCTCGAAATGCGCGCCGGCA
AACGCCGAAGTGAAGCCCTCCGCAATTTTGCCGAACGCACTGGCGAAGCCGAATTTCGCAAACTGGTCGCCATTCTGATT
CAGAACGACCGATTTGGCACAAGCATGGGCGAGAGTCTGCGGACTCACTCCGACTTCCTTCGCACGCGCCGCCGCCAGGA
AGCAGAAGAGCGCGCCGGCAAAGTCGGCGTCAAGCTGGTATTCCCGATTTTCTTTTTTATTCTGCCATCCATGCTGGTGG
TGGCGGCAGGTCCGGGCATTCTACAAATCTTCAAGTATTTGTTCCCGATGATGAAGAGCTTAGGATGA

Upstream 100 bases:

>100_bases
CCGACGATTCCGATGGAAAGTACCTGATCGGCGGCGCTATCGTTGCCCAGGTGCTGGGAAACTACTTCATCAAACGAATC
ATCAACATCAAGGTCTGACA

Downstream 100 bases:

>100_bases
TTAACAAAGGAGCGAACATACGATGAGCGATACACTCATGCAGGCTGGGATGTGGATTGCAGCTGGGGGGATTATGATGA
TTTTCCTGAAACGGCGGCGG

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Pilus Assembly Protein; Integral Membrane Protein; Type II Secretion System Protein F; TadC Family Type II/IV Secretion System Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Tight Adherence TadC Related Transmembrane Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MDHPILFSLCAFLMLMLILSWVGYRLIYKPGKFLRQLGNPVITNASKQRIIEEGGEPEASALVTVLHQIGSRVPSSDAEV
ANLKVDLIRAGFRGENALAVFYGVRILTTLGMLILCVMMEARMPPNPVMQLGLMGSGICAGWILPRFFLEKRVAKRQETL
RLSLPDALDLLVVSIEAGLGLDQAIQHVARELYASHPQLSDEMQLVTLEMRAGKRRSEALRNFAERTGEAEFRKLVAILI
QNDRFGTSMGESLRTHSDFLRTRRRQEAEERAGKVGVKLVFPIFFFILPSMLVVAAGPGILQIFKYLFPMMKSLG

Sequences:

>Translated_315_residues
MDHPILFSLCAFLMLMLILSWVGYRLIYKPGKFLRQLGNPVITNASKQRIIEEGGEPEASALVTVLHQIGSRVPSSDAEV
ANLKVDLIRAGFRGENALAVFYGVRILTTLGMLILCVMMEARMPPNPVMQLGLMGSGICAGWILPRFFLEKRVAKRQETL
RLSLPDALDLLVVSIEAGLGLDQAIQHVARELYASHPQLSDEMQLVTLEMRAGKRRSEALRNFAERTGEAEFRKLVAILI
QNDRFGTSMGESLRTHSDFLRTRRRQEAEERAGKVGVKLVFPIFFFILPSMLVVAAGPGILQIFKYLFPMMKSLG
>Mature_315_residues
MDHPILFSLCAFLMLMLILSWVGYRLIYKPGKFLRQLGNPVITNASKQRIIEEGGEPEASALVTVLHQIGSRVPSSDAEV
ANLKVDLIRAGFRGENALAVFYGVRILTTLGMLILCVMMEARMPPNPVMQLGLMGSGICAGWILPRFFLEKRVAKRQETL
RLSLPDALDLLVVSIEAGLGLDQAIQHVARELYASHPQLSDEMQLVTLEMRAGKRRSEALRNFAERTGEAEFRKLVAILI
QNDRFGTSMGESLRTHSDFLRTRRRQEAEERAGKVGVKLVFPIFFFILPSMLVVAAGPGILQIFKYLFPMMKSLG

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35200; Mature: 35200

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHPILFSLCAFLMLMLILSWVGYRLIYKPGKFLRQLGNPVITNASKQRIIEEGGEPEAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCCCCHHH
ALVTVLHQIGSRVPSSDAEVANLKVDLIRAGFRGENALAVFYGVRILTTLGMLILCVMME
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARMPPNPVMQLGLMGSGICAGWILPRFFLEKRVAKRQETLRLSLPDALDLLVVSIEAGLG
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
LDQAIQHVARELYASHPQLSDEMQLVTLEMRAGKRRSEALRNFAERTGEAEFRKLVAILI
HHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHH
QNDRFGTSMGESLRTHSDFLRTRRRQEAEERAGKVGVKLVFPIFFFILPSMLVVAAGPGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCH
LQIFKYLFPMMKSLG
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MDHPILFSLCAFLMLMLILSWVGYRLIYKPGKFLRQLGNPVITNASKQRIIEEGGEPEAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCCCCHHH
ALVTVLHQIGSRVPSSDAEVANLKVDLIRAGFRGENALAVFYGVRILTTLGMLILCVMME
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARMPPNPVMQLGLMGSGICAGWILPRFFLEKRVAKRQETLRLSLPDALDLLVVSIEAGLG
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
LDQAIQHVARELYASHPQLSDEMQLVTLEMRAGKRRSEALRNFAERTGEAEFRKLVAILI
HHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHH
QNDRFGTSMGESLRTHSDFLRTRRRQEAEERAGKVGVKLVFPIFFFILPSMLVVAAGPGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCH
LQIFKYLFPMMKSLG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA