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The map label for this gene is 116620535

Identifier: 116620535

GI number: 116620535

Start: 1740992

End: 1741963

Strand: Direct

Name: 116620535

Synonym: Acid_1413

Alternate gene names: NA

Gene position: 1740992-1741963 (Clockwise)

Preceding gene: 116620534

Following gene: 116620536

Centisome position: 17.47

GC content: 60.39

Gene sequence:

>972_bases
ATGCCTTTGACGTTGATTGTTTCTTTCGTCGTCGTTTTCGCGCTCATGCTGCTGGCGGTGAGCCTGGGCCTGAAGTATTT
CGACGCACGGCGCAAGAAGCAAGTGGTGGACATGCTGCATACGGCCTCCGGCGAGCCGGCGGTCAGCGTCAGCAATCTAC
TCAAAGAAATCGAGAACGACAAACCGACCGGTTTGAAACGCCTGCTCACCTCCTTTCAATTTTCGCGGCACGCCGCGGAA
ATGATTCAGCAGGCGGGCCTCAACTGGTCGCCTTCGCGTCTGATGGCGGCGATGGCGCTGATGATGATCCCGGGCTTCGG
CCTCGGGCTCATGATGCCCTTCCTGTTTAATGCGCCCACCACGGCGGTGGTGCTGGCGCTGCTCTTCGGTTCCGCTCCCT
ATGTGGTGGTACGGCAGAAGCGCAGCAAGCGGCTGGCCACGCTCGAAGAGCAGTTCCCCGAATCGCTCGACTTCTTGGCT
CGCTCCATGCGCGCCGGCCATGCCTTCTCCATCAGCCTGGAGATGCTCGGTGAGGAACTCGCCGACCCCTTGGGACAGGA
ATTCCGCGCGCTCTTCAACGAGCAGAACCTCGGCGCGCCGCTTGACACCGCGCTGCGTAACTTCACCACCAGGGTGCCGC
TGCTCGACGTCCGCTTCTTTACTTCCTCGGTGCTGCTGCAAAAGCAGACCGGCGGCAACCTCAGTGAAATTCTCGCCCGA
CTCGCCTACGTAATTCGCGAGCGTTTCCGCTTGAAGGGACAGGTCAAGGCGGCCAGCGCCCACGGACGTCTCACGGCGAC
AATTCTCACGCTCCTGCCGGTGGGCACCATGCTGGCGCTGTTGGTAGTGGCGCCTGGTTATCTCCAGGGCATGGCCGACG
ATTCCGATGGAAAGTACCTGATCGGCGGCGCTATCGTTGCCCAGGTGCTGGGAAACTACTTCATCAAACGAATCATCAAC
ATCAAGGTCTGA

Upstream 100 bases:

>100_bases
TCCGCGCCACCGGTATCCGCCCCAAGTTCTACGACCGCCTCAAGCAGTCCGGCATCGTGCTGCCCACGCAAATGTTTCAG
ACCGTCGTGGAGATTAACTG

Downstream 100 bases:

>100_bases
CAATGGATCATCCGATATTATTTTCGTTGTGCGCGTTCCTGATGCTGATGCTCATCCTCAGCTGGGTCGGATACCGTCTG
ATCTACAAACCGGGAAAGTT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Flp Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Integral Membrane Protein; TadB Protein; Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain; Type II Secretion System Protein F Domain; Tight Adherence Protein B; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Type II Secretion System; MaoC Protein; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Bacterial Type II Secretion System Protein F Domain Protein; Bacterial Type II Secretion System Protein F; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Tight Adherance Operon Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPLTLIVSFVVVFALMLLAVSLGLKYFDARRKKQVVDMLHTASGEPAVSVSNLLKEIENDKPTGLKRLLTSFQFSRHAAE
MIQQAGLNWSPSRLMAAMALMMIPGFGLGLMMPFLFNAPTTAVVLALLFGSAPYVVVRQKRSKRLATLEEQFPESLDFLA
RSMRAGHAFSISLEMLGEELADPLGQEFRALFNEQNLGAPLDTALRNFTTRVPLLDVRFFTSSVLLQKQTGGNLSEILAR
LAYVIRERFRLKGQVKAASAHGRLTATILTLLPVGTMLALLVVAPGYLQGMADDSDGKYLIGGAIVAQVLGNYFIKRIIN
IKV

Sequences:

>Translated_323_residues
MPLTLIVSFVVVFALMLLAVSLGLKYFDARRKKQVVDMLHTASGEPAVSVSNLLKEIENDKPTGLKRLLTSFQFSRHAAE
MIQQAGLNWSPSRLMAAMALMMIPGFGLGLMMPFLFNAPTTAVVLALLFGSAPYVVVRQKRSKRLATLEEQFPESLDFLA
RSMRAGHAFSISLEMLGEELADPLGQEFRALFNEQNLGAPLDTALRNFTTRVPLLDVRFFTSSVLLQKQTGGNLSEILAR
LAYVIRERFRLKGQVKAASAHGRLTATILTLLPVGTMLALLVVAPGYLQGMADDSDGKYLIGGAIVAQVLGNYFIKRIIN
IKV
>Mature_322_residues
PLTLIVSFVVVFALMLLAVSLGLKYFDARRKKQVVDMLHTASGEPAVSVSNLLKEIENDKPTGLKRLLTSFQFSRHAAEM
IQQAGLNWSPSRLMAAMALMMIPGFGLGLMMPFLFNAPTTAVVLALLFGSAPYVVVRQKRSKRLATLEEQFPESLDFLAR
SMRAGHAFSISLEMLGEELADPLGQEFRALFNEQNLGAPLDTALRNFTTRVPLLDVRFFTSSVLLQKQTGGNLSEILARL
AYVIRERFRLKGQVKAASAHGRLTATILTLLPVGTMLALLVVAPGYLQGMADDSDGKYLIGGAIVAQVLGNYFIKRIINI
KV

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35444; Mature: 35312

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTLIVSFVVVFALMLLAVSLGLKYFDARRKKQVVDMLHTASGEPAVSVSNLLKEIEND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
KPTGLKRLLTSFQFSRHAAEMIQQAGLNWSPSRLMAAMALMMIPGFGLGLMMPFLFNAPT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCH
TAVVLALLFGSAPYVVVRQKRSKRLATLEEQFPESLDFLARSMRAGHAFSISLEMLGEEL
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ADPLGQEFRALFNEQNLGAPLDTALRNFTTRVPLLDVRFFTSSVLLQKQTGGNLSEILAR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
LAYVIRERFRLKGQVKAASAHGRLTATILTLLPVGTMLALLVVAPGYLQGMADDSDGKYL
HHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEE
IGGAIVAQVLGNYFIKRIINIKV
EHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLTLIVSFVVVFALMLLAVSLGLKYFDARRKKQVVDMLHTASGEPAVSVSNLLKEIEND
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
KPTGLKRLLTSFQFSRHAAEMIQQAGLNWSPSRLMAAMALMMIPGFGLGLMMPFLFNAPT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCH
TAVVLALLFGSAPYVVVRQKRSKRLATLEEQFPESLDFLARSMRAGHAFSISLEMLGEEL
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ADPLGQEFRALFNEQNLGAPLDTALRNFTTRVPLLDVRFFTSSVLLQKQTGGNLSEILAR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
LAYVIRERFRLKGQVKAASAHGRLTATILTLLPVGTMLALLVVAPGYLQGMADDSDGKYL
HHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEE
IGGAIVAQVLGNYFIKRIINIKV
EHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA