| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620466
Identifier: 116620466
GI number: 116620466
Start: 1654542
End: 1655006
Strand: Direct
Name: 116620466
Synonym: Acid_1344
Alternate gene names: NA
Gene position: 1654542-1655006 (Clockwise)
Preceding gene: 116620465
Following gene: 116620467
Centisome position: 16.6
GC content: 62.8
Gene sequence:
>465_bases TTGAACGGCGAGGGGGTGGTGTGGCACAATCAGGCGATTCCGTACAAAGCAGATTTCTCACTGAACGGTAACCTGAGCGA ACTCGAGCGGCTGTCCGCCGAGATCTCCCGCTTTTGCCGGGAGAATTCGCTGGACGAAGAAGCCGAGTTCCAGTTGAACC TGGTGTTGGAGGAGCTTTTCGTGAACACGATGCGCCACGGGGGATGCGAAGGCGCGCAGAACTCGACGCGCGTCCGGTTG CGATCGGAGGCAGACGGGGTGGAGGTGGTGTTCGCGGACCGGGGCGTTCCGTTCGACCCGACCTCCGTGCCGGCGGCCAA TGTCGCGGCTCCGCTGGAGGAGCGGCGCGCGGGCGGACTGGGGATTCATCTGGTGCGGGAAATTATGCGCGACCTGCAAT ACCGCCGCGCGGGGGAATGGAACCAGATCAGCATGAAACGGCCTCACGGGCCGAGAGAATTATGA
Upstream 100 bases:
>100_bases CGGCTGCGGCCAGGATTGGCCGCCCCACAAGACGGCAAGCCGCCAAGGAACAACGAAGCTCGCTCTTGTGGTCGCGGCTC ATTGACACCGAGGGTGAGTA
Downstream 100 bases:
>100_bases TTCAACTGACGGAAGAGACCAAAGGGGAATGGTGCATCGTCGGGGTTCGCGGGCGTCTTGACGCGGAATCGGCCGATGAG TTGGAGGGCGCGCTGCGCGG
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: Sensor Histidine Kinase; Anti-Sigma Factor; Anti-Sigma Regulatory Factor; Cache/SpoIIE Domain-Containing Protein; Anti Sigma Factor; Anti-Sigma-Factor Antagonist; Secreted Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MNGEGVVWHNQAIPYKADFSLNGNLSELERLSAEISRFCRENSLDEEAEFQLNLVLEELFVNTMRHGGCEGAQNSTRVRL RSEADGVEVVFADRGVPFDPTSVPAANVAAPLEERRAGGLGIHLVREIMRDLQYRRAGEWNQISMKRPHGPREL
Sequences:
>Translated_154_residues MNGEGVVWHNQAIPYKADFSLNGNLSELERLSAEISRFCRENSLDEEAEFQLNLVLEELFVNTMRHGGCEGAQNSTRVRL RSEADGVEVVFADRGVPFDPTSVPAANVAAPLEERRAGGLGIHLVREIMRDLQYRRAGEWNQISMKRPHGPREL >Mature_154_residues MNGEGVVWHNQAIPYKADFSLNGNLSELERLSAEISRFCRENSLDEEAEFQLNLVLEELFVNTMRHGGCEGAQNSTRVRL RSEADGVEVVFADRGVPFDPTSVPAANVAAPLEERRAGGLGIHLVREIMRDLQYRRAGEWNQISMKRPHGPREL
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17317; Mature: 17317
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGEGVVWHNQAIPYKADFSLNGNLSELERLSAEISRFCRENSLDEEAEFQLNLVLEELF CCCCCEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VNTMRHGGCEGAQNSTRVRLRSEADGVEVVFADRGVPFDPTSVPAANVAAPLEERRAGGL HHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHCCHHHHHCCCC GIHLVREIMRDLQYRRAGEWNQISMKRPHGPREL HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC >Mature Secondary Structure MNGEGVVWHNQAIPYKADFSLNGNLSELERLSAEISRFCRENSLDEEAEFQLNLVLEELF CCCCCEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VNTMRHGGCEGAQNSTRVRLRSEADGVEVVFADRGVPFDPTSVPAANVAAPLEERRAGGL HHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHCCHHHHHCCCC GIHLVREIMRDLQYRRAGEWNQISMKRPHGPREL HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA