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The map label for this gene is 116620403

Identifier: 116620403

GI number: 116620403

Start: 1578956

End: 1579717

Strand: Direct

Name: 116620403

Synonym: Acid_1280

Alternate gene names: NA

Gene position: 1578956-1579717 (Clockwise)

Preceding gene: 116620402

Following gene: 116620404

Centisome position: 15.84

GC content: 61.81

Gene sequence:

>762_bases
ATGTTCGAGCAAACATTCGTCGAGGGTAAGACAAAATCGACCTGGACAACTCTGGTGGCTTTCATCGCGCAGATTTGTTT
GATGACCGTTGGCGTCATCCTGCCGATGGTTTACTATGATGTCCTACCGAAAACCACGTTGCAGAGTTTCTTGGTGGCGC
CTCCGCCGCCTCCCCCGCCTCCACCCCCGCCTTCGGCGCCAGCTCCCGTCAAAGTCGTTAAGATCATTCCTCGCCAATTT
GACGCCGGCAAACTGATGGCCCCGAAAGTGGTCCCCAAAGAAATCGCGACCATTAAGGAAGAAGAGCTCCCGCCAGCCGC
GAGCGGCGTCGGCGGCGTAGTCGGCGGCGTCCCGGGCGGCGTGGCCGGTGGCACTCCCGGCGGCGTGCTCGGTGGAATCA
TCAGCTCGGTTCCGAGTGCAGCGCCTCCTCCTCCGCCTCCTCCGCCGGTCGAGAAGAAGCCAGTGACGCCGAAGCGCATC
ACCATCGGCGGCAACGTGCAGCAGGCGAAGCTGGTCCGCCAGCCCAAGCCGAACTATCCTCCGTTGGCCAAGCAGGCGCG
CATCTCGGGCGTCGTCCACCTGGCCGCCATCATCTCCAAGGATGGCACCATTCAGGATCTCAAGGTGATCGGCGGCCACC
CGCTGCTGATTCCCGCCGCTCTCGAAGCGGTGAAACAGTGGGTATACCAGCCGACCCTTCTCAACGGAGAGCCGGTCGAG
GTGTCAACTCAGATCGACGTGAACTTCACGTTGAGCCAGTAG

Upstream 100 bases:

>100_bases
CGGAGACGGTGCGCAAAAGCCCGGCGAGGGCAATCAAATAGAAACGCCGCGGCGGGCACTTTCGTGCTCCCTGCGGAGTC
AAAAGGAAAGGGAGCTTTGT

Downstream 100 bases:

>100_bases
TAAAAAAGAAGCCCCGGTACGTTCAACACCGGGCAGATAGCAGAAAAATCAACTCGCAGGAGAGAGAAAACCTATGCTTT
TGCAATTGCAAGTGTGGTCG

Product: TonB family protein

Products: NA

Alternate protein names: NB-Like Protein; NB Domain Protein; Peptidase; GAF Sensor Protein

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MFEQTFVEGKTKSTWTTLVAFIAQICLMTVGVILPMVYYDVLPKTTLQSFLVAPPPPPPPPPPPSAPAPVKVVKIIPRQF
DAGKLMAPKVVPKEIATIKEEELPPAASGVGGVVGGVPGGVAGGTPGGVLGGIISSVPSAAPPPPPPPPVEKKPVTPKRI
TIGGNVQQAKLVRQPKPNYPPLAKQARISGVVHLAAIISKDGTIQDLKVIGGHPLLIPAALEAVKQWVYQPTLLNGEPVE
VSTQIDVNFTLSQ

Sequences:

>Translated_253_residues
MFEQTFVEGKTKSTWTTLVAFIAQICLMTVGVILPMVYYDVLPKTTLQSFLVAPPPPPPPPPPPSAPAPVKVVKIIPRQF
DAGKLMAPKVVPKEIATIKEEELPPAASGVGGVVGGVPGGVAGGTPGGVLGGIISSVPSAAPPPPPPPPVEKKPVTPKRI
TIGGNVQQAKLVRQPKPNYPPLAKQARISGVVHLAAIISKDGTIQDLKVIGGHPLLIPAALEAVKQWVYQPTLLNGEPVE
VSTQIDVNFTLSQ
>Mature_253_residues
MFEQTFVEGKTKSTWTTLVAFIAQICLMTVGVILPMVYYDVLPKTTLQSFLVAPPPPPPPPPPPSAPAPVKVVKIIPRQF
DAGKLMAPKVVPKEIATIKEEELPPAASGVGGVVGGVPGGVAGGTPGGVLGGIISSVPSAAPPPPPPPPVEKKPVTPKRI
TIGGNVQQAKLVRQPKPNYPPLAKQARISGVVHLAAIISKDGTIQDLKVIGGHPLLIPAALEAVKQWVYQPTLLNGEPVE
VSTQIDVNFTLSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26371; Mature: 26371

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEQTFVEGKTKSTWTTLVAFIAQICLMTVGVILPMVYYDVLPKTTLQSFLVAPPPPPPP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCC
PPPPSAPAPVKVVKIIPRQFDAGKLMAPKVVPKEIATIKEEELPPAASGVGGVVGGVPGG
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCC
VAGGTPGGVLGGIISSVPSAAPPPPPPPPVEKKPVTPKRITIGGNVQQAKLVRQPKPNYP
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCC
PLAKQARISGVVHLAAIISKDGTIQDLKVIGGHPLLIPAALEAVKQWVYQPTLLNGEPVE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCEE
VSTQIDVNFTLSQ
EEEEEEEEEEECC
>Mature Secondary Structure
MFEQTFVEGKTKSTWTTLVAFIAQICLMTVGVILPMVYYDVLPKTTLQSFLVAPPPPPPP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCC
PPPPSAPAPVKVVKIIPRQFDAGKLMAPKVVPKEIATIKEEELPPAASGVGGVVGGVPGG
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCC
VAGGTPGGVLGGIISSVPSAAPPPPPPPPVEKKPVTPKRITIGGNVQQAKLVRQPKPNYP
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCC
PLAKQARISGVVHLAAIISKDGTIQDLKVIGGHPLLIPAALEAVKQWVYQPTLLNGEPVE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCEE
VSTQIDVNFTLSQ
EEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA