| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is dedA [C]
Identifier: 116620371
GI number: 116620371
Start: 1545077
End: 1545877
Strand: Direct
Name: dedA [C]
Synonym: Acid_1248
Alternate gene names: 116620371
Gene position: 1545077-1545877 (Clockwise)
Preceding gene: 116620370
Following gene: 116620373
Centisome position: 15.5
GC content: 64.42
Gene sequence:
>801_bases ATGACTCACGCGGCGCAGTTTTTGGTGCACTACGGGTATGTGCTTCTCTTCGGATGGCTGCTGCTGGAGCAGGGCGCGCT GCCTTTGCCTTCGATACCGCTGCTGCTGGCATGCGGCGCGCTGGCGCGGTCGGGGCAGCTGCATCCCCTTCTGGTGGTGG CCAGCGGACTGGCGGCGTGCCTGATCGCGGACAATGTGTGGTTTCAACTGGGACGGCGGAAAGGCGGCAAGGTGCTGCAC TTTCTCTGCCGGATCGCGCTGGAGCCGGACTCGTGCGTGCGGCAGACCGAGAATGCCTTCCAGCGCTACGGCGTCCATTC GCTGCTGGTTTCCAAGTTCATTCCGGGACTGAACGCGGTGGCGGCGCCGCTGGCGGGCAGCAGCGGGACCGGCATGGCGC GCTTCCTGATATTCGACACCGCCGGCGCGCTGCTCTGGATCCTGGCTTATACCGGCCTCGGCTACGTGTTCAGCGACCAG ATCGAAATCGTCGGCGCGTACGCGGTCCGCACCGGCTCCGGGTTGGCGATAGTGACAGTGGCCGTAGTGGCGGGATGGGT CGCGTGGAAATACATTCAGCGCCAGCGCTTCCTCAAGAAGATCAAGGTGGCGCGGATCACTCCCCAGGAACTGCGGGAGA AGCTGGACGCCGGGGAAGACGTGTTCGTGATCGATCTGCGCAGCGAGCGGGAGTTCGAGGAAGACGCGATACCGGGCGCA ATGCATATGCCCGCCAACCAGCTGGCGGAGCGGAATTCGGCGATCCCGCGCGATCGCGATGTCATCCTCTTCTGCAGTTG A
Upstream 100 bases:
>100_bases GCGAAATCAAGGCGCTCGGCGAGTGCGGAATGCCGCATGCCGATTGGGTGGCGAGGATCCTGGCGAGCGGCCGTCCGCAG ATGCCGTAAGCTGAAAGTCC
Downstream 100 bases:
>100_bases CCCAACGAAGCTTCGAGCGCCCGTGCGGCGCTCCTCCTCAAGAGTCACGGGATTGTCCGGGTGCGGCCCTTGCTGGGCGG CAGCGACGCATGGCGCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Transmembrane Protein; DedA Family Protein; DedA Protein; Thiosulfate Sulfurtransferase; Membrane-Associated Protein; Integral-Membrane Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Protein; Sulfurtransferase DedA And GlpE Domains
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTHAAQFLVHYGYVLLFGWLLLEQGALPLPSIPLLLACGALARSGQLHPLLVVASGLAACLIADNVWFQLGRRKGGKVLH FLCRIALEPDSCVRQTENAFQRYGVHSLLVSKFIPGLNAVAAPLAGSSGTGMARFLIFDTAGALLWILAYTGLGYVFSDQ IEIVGAYAVRTGSGLAIVTVAVVAGWVAWKYIQRQRFLKKIKVARITPQELREKLDAGEDVFVIDLRSEREFEEDAIPGA MHMPANQLAERNSAIPRDRDVILFCS
Sequences:
>Translated_266_residues MTHAAQFLVHYGYVLLFGWLLLEQGALPLPSIPLLLACGALARSGQLHPLLVVASGLAACLIADNVWFQLGRRKGGKVLH FLCRIALEPDSCVRQTENAFQRYGVHSLLVSKFIPGLNAVAAPLAGSSGTGMARFLIFDTAGALLWILAYTGLGYVFSDQ IEIVGAYAVRTGSGLAIVTVAVVAGWVAWKYIQRQRFLKKIKVARITPQELREKLDAGEDVFVIDLRSEREFEEDAIPGA MHMPANQLAERNSAIPRDRDVILFCS >Mature_265_residues THAAQFLVHYGYVLLFGWLLLEQGALPLPSIPLLLACGALARSGQLHPLLVVASGLAACLIADNVWFQLGRRKGGKVLHF LCRIALEPDSCVRQTENAFQRYGVHSLLVSKFIPGLNAVAAPLAGSSGTGMARFLIFDTAGALLWILAYTGLGYVFSDQI EIVGAYAVRTGSGLAIVTVAVVAGWVAWKYIQRQRFLKKIKVARITPQELREKLDAGEDVFVIDLRSEREFEEDAIPGAM HMPANQLAERNSAIPRDRDVILFCS
Specific function: Unknown
COG id: COG0586
COG function: function code S; Uncharacterized membrane-associated protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788656, Length=170, Percent_Identity=28.2352941176471, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29074; Mature: 28943
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHAAQFLVHYGYVLLFGWLLLEQGALPLPSIPLLLACGALARSGQLHPLLVVASGLAAC CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LIADNVWFQLGRRKGGKVLHFLCRIALEPDSCVRQTENAFQRYGVHSLLVSKFIPGLNAV HHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AAPLAGSSGTGMARFLIFDTAGALLWILAYTGLGYVFSDQIEIVGAYAVRTGSGLAIVTV HHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCEEEEEEEEEECCCCHHHHHH AVVAGWVAWKYIQRQRFLKKIKVARITPQELREKLDAGEDVFVIDLRSEREFEEDAIPGA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCC MHMPANQLAERNSAIPRDRDVILFCS CCCCHHHHHHHCCCCCCCCCEEEEEC >Mature Secondary Structure THAAQFLVHYGYVLLFGWLLLEQGALPLPSIPLLLACGALARSGQLHPLLVVASGLAAC CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LIADNVWFQLGRRKGGKVLHFLCRIALEPDSCVRQTENAFQRYGVHSLLVSKFIPGLNAV HHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AAPLAGSSGTGMARFLIFDTAGALLWILAYTGLGYVFSDQIEIVGAYAVRTGSGLAIVTV HHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCEEEEEEEEEECCCCHHHHHH AVVAGWVAWKYIQRQRFLKKIKVARITPQELREKLDAGEDVFVIDLRSEREFEEDAIPGA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCC MHMPANQLAERNSAIPRDRDVILFCS CCCCHHHHHHHCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA