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The map label for this gene is araB [H]

Identifier: 116620354

GI number: 116620354

Start: 1520918

End: 1522498

Strand: Reverse

Name: araB [H]

Synonym: Acid_1231

Alternate gene names: 116620354

Gene position: 1522498-1520918 (Counterclockwise)

Preceding gene: 116620355

Following gene: 116620353

Centisome position: 15.28

GC content: 64.83

Gene sequence:

>1581_bases
ATGAGCATCGTCGCCGGAGTCGATTTCGGTACCCTCAGCGTTCGCGTTTCCATCTTCGATTCCTTCCGCGGCCGTCTCGG
CGCCGGCGCCGCCGACTACCCGCTCCTGCGCAAGAACGAAGATCCCGATCACGCTACCCAGAGCCATGCCGACCATATGG
CTGCCCTGGCCCTTGCCACCCGACGCGCATTCGAGAATGCCGGCATCGATGGCCACGCGATCGAAGCCATCGCGCTCGAC
ACCACGGGTTCCAGCGTAATCCCGGTGGACTCGGCCATGCAGCCGATCGACGATTACTACCTCTGGTGCGATCACCGCGC
CTGGAAGGAAGCCTCCGAGATCACCTCCGCCGCTAACCAGCAAAAGCTGGCAGCCATCGATTGGTGCGGCGGCATTTACT
CCAGCGAATGGGGCTTCGCCAAACTGCTCCACTGGCTCCGCCACAACCCCGCGAAGCGCGCCCGTTTCGCCACCGCGCTC
GAACACTGCGACATGGTCGCCGCCGTCCTATGCGGCGTCACCGACCCCGCGCAGGTCTCGCGCAGCATCTGCGCTATGGG
CCACAAGTGGATGTGGAGCGCCGCCCTCGGCGGCCTCCCTCCCGAGGAATTTCTCACTTCGCTCGATCCCACCCTCGCCG
GAGTCCGCGGACAACTCGACGGCCGCTACGCCACCAGCGATCAGATCGCCGGGTATTTGAGCCCCGCATGGGCCGGGACA
CTCGGCCTGCGCGCCGGTATTCCAATCCCGGTCGGCGCCTTCGACGCCCATTGGGATGCCATCGGCGCCGGCGTCCGCAT
CGGGGATGTGGTCAACGTGGTCGGCACCTCAACCTGCATCATGGCGATCAGTGATCAGCCGAGCCTGATTCCCGGCGTCT
GCGGCGTGGTCCCCGGTTCGATTCATCCCGGCTACACCGGCATCGAAGCCGGACTCTCCGCGACCGGCGATATCTTCGAA
GCCATCGCACGCCGCGCCGGCACCAGCGTCGCCGAACTTTCCAAGGGGCTCGAGCACTATCGCGCGGGCGAGACCGGCCT
GCTCCGCCTCACCTGGGATAATGGCGATCGCACGGTGCTCGTCAATCCCGAATTGAGCGGGGTGACCCTGGGGTGGCGCC
TCACCACCACTGCGCAGGACGAACTCTTCGCCGCCATCGAAGGCACCGCCTTCCACACCCGCGTCATTCTCGAACGCATG
GAGCAATACGGTGTCCCGGTGCGCCGCATTATCAACGGCGGCGGCATTCCGCAGAAGAACGCCGTGCTGAACCAGGTCTA
TGCCAACGTGATGGGCAAACCCATCCTGGTGCCCAAGGGCGACGTGACCAGCCTCGGCTCGGCCATCTTCGCCTTCATGG
CCGCTGGAGCCTTCCGCACCATCGAAGAGGCGCAGGACGCGCTCTGCCCCGGCTTTGTCACCATCGAACCGGAGCGCGAT
CAGGCCGCCACCAGCCAGGAACTCTTTCACCTTTACAATAAATTGTACTTTGCATTCGGCAACGGCCAGGAGCTGCCCCA
ATTGCGCCGCATCGCCGCCCACACCCGAGGAGGAAAAAGTGCTGGAAACGCTGCGAGCTGA

Upstream 100 bases:

>100_bases
GCAGATGAACGCAGATAAACGCAGATAAGAATTAGAATTTTGTTTTATCTGTGTTCATCGGCGTTCATCTGCGGCCAATA
ATATCTTTCAGGAGTTCCTC

Downstream 100 bases:

>100_bases
AGTCCTGGAAGCCAATCTCGAACTCGTCCGCCGCGGCCTGGTGGTCTACACCTTCGGCAACGCCAGCGCCGTATCGCGCG
AGCACGGCCTCTGCGTGATC

Product: ribulokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSIVAGVDFGTLSVRVSIFDSFRGRLGAGAADYPLLRKNEDPDHATQSHADHMAALALATRRAFENAGIDGHAIEAIALD
TTGSSVIPVDSAMQPIDDYYLWCDHRAWKEASEITSAANQQKLAAIDWCGGIYSSEWGFAKLLHWLRHNPAKRARFATAL
EHCDMVAAVLCGVTDPAQVSRSICAMGHKWMWSAALGGLPPEEFLTSLDPTLAGVRGQLDGRYATSDQIAGYLSPAWAGT
LGLRAGIPIPVGAFDAHWDAIGAGVRIGDVVNVVGTSTCIMAISDQPSLIPGVCGVVPGSIHPGYTGIEAGLSATGDIFE
AIARRAGTSVAELSKGLEHYRAGETGLLRLTWDNGDRTVLVNPELSGVTLGWRLTTTAQDELFAAIEGTAFHTRVILERM
EQYGVPVRRIINGGGIPQKNAVLNQVYANVMGKPILVPKGDVTSLGSAIFAFMAAGAFRTIEEAQDALCPGFVTIEPERD
QAATSQELFHLYNKLYFAFGNGQELPQLRRIAAHTRGGKSAGNAAS

Sequences:

>Translated_526_residues
MSIVAGVDFGTLSVRVSIFDSFRGRLGAGAADYPLLRKNEDPDHATQSHADHMAALALATRRAFENAGIDGHAIEAIALD
TTGSSVIPVDSAMQPIDDYYLWCDHRAWKEASEITSAANQQKLAAIDWCGGIYSSEWGFAKLLHWLRHNPAKRARFATAL
EHCDMVAAVLCGVTDPAQVSRSICAMGHKWMWSAALGGLPPEEFLTSLDPTLAGVRGQLDGRYATSDQIAGYLSPAWAGT
LGLRAGIPIPVGAFDAHWDAIGAGVRIGDVVNVVGTSTCIMAISDQPSLIPGVCGVVPGSIHPGYTGIEAGLSATGDIFE
AIARRAGTSVAELSKGLEHYRAGETGLLRLTWDNGDRTVLVNPELSGVTLGWRLTTTAQDELFAAIEGTAFHTRVILERM
EQYGVPVRRIINGGGIPQKNAVLNQVYANVMGKPILVPKGDVTSLGSAIFAFMAAGAFRTIEEAQDALCPGFVTIEPERD
QAATSQELFHLYNKLYFAFGNGQELPQLRRIAAHTRGGKSAGNAAS
>Mature_525_residues
SIVAGVDFGTLSVRVSIFDSFRGRLGAGAADYPLLRKNEDPDHATQSHADHMAALALATRRAFENAGIDGHAIEAIALDT
TGSSVIPVDSAMQPIDDYYLWCDHRAWKEASEITSAANQQKLAAIDWCGGIYSSEWGFAKLLHWLRHNPAKRARFATALE
HCDMVAAVLCGVTDPAQVSRSICAMGHKWMWSAALGGLPPEEFLTSLDPTLAGVRGQLDGRYATSDQIAGYLSPAWAGTL
GLRAGIPIPVGAFDAHWDAIGAGVRIGDVVNVVGTSTCIMAISDQPSLIPGVCGVVPGSIHPGYTGIEAGLSATGDIFEA
IARRAGTSVAELSKGLEHYRAGETGLLRLTWDNGDRTVLVNPELSGVTLGWRLTTTAQDELFAAIEGTAFHTRVILERME
QYGVPVRRIINGGGIPQKNAVLNQVYANVMGKPILVPKGDVTSLGSAIFAFMAAGAFRTIEEAQDALCPGFVTIEPERDQ
AATSQELFHLYNKLYFAFGNGQELPQLRRIAAHTRGGKSAGNAAS

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=542, Percent_Identity=27.1217712177122, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI164663830, Length=567, Percent_Identity=26.2786596119929, Blast_Score=124, Evalue=2e-28,
Organism=Escherichia coli, GI1786249, Length=541, Percent_Identity=33.641404805915, Blast_Score=239, Evalue=4e-64,
Organism=Saccharomyces cerevisiae, GI6320314, Length=531, Percent_Identity=24.105461393597, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24657106, Length=562, Percent_Identity=27.0462633451957, Blast_Score=117, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24657102, Length=562, Percent_Identity=27.0462633451957, Blast_Score=117, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21356323, Length=456, Percent_Identity=28.0701754385965, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 56008; Mature: 55877

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVAGVDFGTLSVRVSIFDSFRGRLGAGAADYPLLRKNEDPDHATQSHADHMAALALAT
CCEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RRAFENAGIDGHAIEAIALDTTGSSVIPVDSAMQPIDDYYLWCDHRAWKEASEITSAANQ
HHHHHHCCCCCCEEEEEEEECCCCCEEECCHHHCCCHHHEEEECCHHHHHHHHHHHHHCH
QKLAAIDWCGGIYSSEWGFAKLLHWLRHNPAKRARFATALEHCDMVAAVLCGVTDPAQVS
HHEEEEHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RSICAMGHKWMWSAALGGLPPEEFLTSLDPTLAGVRGQLDGRYATSDQIAGYLSPAWAGT
HHHHHHCCHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHH
LGLRAGIPIPVGAFDAHWDAIGAGVRIGDVVNVVGTSTCIMAISDQPSLIPGVCGVVPGS
HHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCC
IHPGYTGIEAGLSATGDIFEAIARRAGTSVAELSKGLEHYRAGETGLLRLTWDNGDRTVL
CCCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEE
VNPELSGVTLGWRLTTTAQDELFAAIEGTAFHTRVILERMEQYGVPVRRIINGGGIPQKN
ECCCCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHH
AVLNQVYANVMGKPILVPKGDVTSLGSAIFAFMAAGAFRTIEEAQDALCPGFVTIEPERD
HHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
QAATSQELFHLYNKLYFAFGNGQELPQLRRIAAHTRGGKSAGNAAS
HHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SIVAGVDFGTLSVRVSIFDSFRGRLGAGAADYPLLRKNEDPDHATQSHADHMAALALAT
CEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RRAFENAGIDGHAIEAIALDTTGSSVIPVDSAMQPIDDYYLWCDHRAWKEASEITSAANQ
HHHHHHCCCCCCEEEEEEEECCCCCEEECCHHHCCCHHHEEEECCHHHHHHHHHHHHHCH
QKLAAIDWCGGIYSSEWGFAKLLHWLRHNPAKRARFATALEHCDMVAAVLCGVTDPAQVS
HHEEEEHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RSICAMGHKWMWSAALGGLPPEEFLTSLDPTLAGVRGQLDGRYATSDQIAGYLSPAWAGT
HHHHHHCCHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHH
LGLRAGIPIPVGAFDAHWDAIGAGVRIGDVVNVVGTSTCIMAISDQPSLIPGVCGVVPGS
HHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCC
IHPGYTGIEAGLSATGDIFEAIARRAGTSVAELSKGLEHYRAGETGLLRLTWDNGDRTVL
CCCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEE
VNPELSGVTLGWRLTTTAQDELFAAIEGTAFHTRVILERMEQYGVPVRRIINGGGIPQKN
ECCCCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHH
AVLNQVYANVMGKPILVPKGDVTSLGSAIFAFMAAGAFRTIEEAQDALCPGFVTIEPERD
HHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
QAATSQELFHLYNKLYFAFGNGQELPQLRRIAAHTRGGKSAGNAAS
HHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA