| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620324
Identifier: 116620324
GI number: 116620324
Start: 1481673
End: 1483919
Strand: Reverse
Name: 116620324
Synonym: Acid_1201
Alternate gene names: NA
Gene position: 1483919-1481673 (Counterclockwise)
Preceding gene: 116620326
Following gene: 116620323
Centisome position: 14.89
GC content: 62.62
Gene sequence:
>2247_bases ATGCTGGAGGATACCCCCTTGAAGATTGTGAGAGCGTTTCTGGTTTTGCTTTTCGCCGCCGGCCTGCTTGCTGAAGAGGG CATGTGGATGCCGCAGCAGATACCTGAAATGGCCGCCAAGCTGAGAGCCCTGGGCTTCCGCGGCGACGCGAAGGCGTTTG CCGACCTTTCGGGGCAGCCCATGGGAGCGATTGTGTCGCTGGGCGGCTGTACGGCGTCGTTCGTGTCGCCGGACGGCCTG ATCGTTACCAACCACCACTGCGTGACGGGCGGATTGCAGTTCAACTCCACGCCGGCACGGAATTTACTCAAGGATGGATA CCTGGCAAAGACGCGGAGCGAGGAGCTCCCGAATGGTCCGGGTTCGCGGGTGTTTGTGACGAGCGCGGTCACCGAGGTCA CGAGCGCGATCACAGGGAACATCGACGCCAAGGCGACGGACCGCGAGCGCTACGAACTGATCGAGCGGCGGGTGAAGGAG CGGATCGCGGCGTGCGAGAAGGGTGGACAGCGCTGCAACGTGGCATCATTCTTTGCGGGTTTGAAGTACTTCGAGATCGC GCAGATGGAGATCAAGGACGTGCGCCTGGTGTACGCACCGGCCGAGGGAATCGGTGTGTTCGGGGGGGAGACAGACAACT GGCGATGGCCGCGGCACACTGGCGATTGGAGTTTTCTGCGTGCCTACGTGGGCCAGGACGGAAAGCCGGCGGCTTTCTCA AAGGACAACGTTCCGTTCAAGCCGAAGCACTGGCTCAAGATCTCCACGGAAGGCATCAAGCCGGGGGAACTGGTTTTCGT GGCGGGCTATCCGGGACGAACGCTGCGACACCAGACCTATGCGCAGGTGAAAGAGACCACGGAGTGGAGCATGCCCCGCT CGATTCGACTGGCGGAGGAACAGCTGGCGATTCTGGAGCAGCTTTCCAAACAGGACAAGACGATCGCACTGAAGATGGCT GGGCGTGTCCAGGGGCTGAATAACAGCCTTACCAATCAGAAGGGCATGCTCGAGGGGCTGGTCAAGGGCGGCAGCCTCGG AATGAAGCAGGCACGGGAGAAGGAACTGGAAGCGTGGATCGCGGCCGATCCGGTCCGGCAGAAGAAGTATGGCGATGTTC TGCCGGCGCTGGGTGCGTTACAGGCGGAAAGCGAGAAGACGCGGGAACAGAGCGCGGCGATGATGATACTGACGTCGGCG TCCTCGTATCTCGGCGCGGCGCAGACGGCATATCGACTGGCCGCGGAGCGTCCCAAGGCGGACCTGGATCGCGAGCCGGG ATTTCAGGAGCGTGATTGGCCGAGGATTCGCGATGGCCAGGACCGGATGCAGCGGACCATGGATGCGACCGCAGACCGGG CACTCCTGCGTTGGGCGCTTGGCCAGGCGGTTGCGCTACCGGCCGACCAGCGGCTCGCCGCGGTGGACCAGGCCGCGGGC CTGAAGGCGGGGATGGCGAAGACGGAGGCGGATCAGGCAATCGACGCCTTCCTGGAGCGGTTGTTCGCGGGCACGAAGCT CGGCGATCGCGATTTCCGGCTGAGTCTGATGGAAAAGAGCAAGGCGGAACTCCTGGCGACCAAGGATCCTTTCATTCTGC TGGCGGCGGCAATGGAGCCGCAGGCGGAAGCGAATCGAAATGCGGCGAAGAATCGCGGCGGAGCGCAGTCGCGCCTGATG CCGCGTTATATGGAAGCGTTGCTGGCGAAGTCGGGCGGCCTGGTGGCGCCGGACGCCAACAGCACTCTGCGCGTGACCTA TGGCCAGGTGAAAGGCGTGGACGCGAAGGACGGCCTTTATTACAAGCCGCAGACGACACTTGGCGGCATTCTCGAGAAGA ACACCGGCGAGGGGGATTTCGACGCGCCGAAGATGCAGCTCGACGCGATCAAGGCGCAGCGCTCAGGTAAGAAGACACCG TACATCGATGCAGGGCTCAAGGGGGTTCCGGTCAACTTCCTATCGACGGTGGACACGACGGGAGGGAATTCCGGCTCCCC GACTCTGAATGGCAAAGGCGAACTGGTCGGGCTGCTGTTCGACGGGACGTATGAATCCGTGGCCTCCAACTTCCTGTTCG ACCCGACGACAACACGCTCGATTCATGTGGACAGCCGGTACATGCTGTGGAACATGGCGGAGGTGGACGGCGCGATTCAC TTGCTGCAGGAAATGTCGATTCCGGACTCGGCGGCTGGTGCATTATTGCGGAGGGGACCCGGGTTGAAGGCGGCTGGAGT CCGGTGA
Upstream 100 bases:
>100_bases GGCCTGCGAGCAAACAAGAGCAGCGTAATACCGCAGGGTGTTATGCTCGGGGCGGTGGCGGCCGGGCGAGGCCGCATCAA AATCATCATCTGACGATTTG
Downstream 100 bases:
>100_bases GATATAACGCCGGGTGAATAACCACGTAATACCGGAACCACCGGCGGGAGTATGTGACTAATTTGACGGCCGTAAGCGGG AGATTGCCAGCGCGCTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MLEDTPLKIVRAFLVLLFAAGLLAEEGMWMPQQIPEMAAKLRALGFRGDAKAFADLSGQPMGAIVSLGGCTASFVSPDGL IVTNHHCVTGGLQFNSTPARNLLKDGYLAKTRSEELPNGPGSRVFVTSAVTEVTSAITGNIDAKATDRERYELIERRVKE RIAACEKGGQRCNVASFFAGLKYFEIAQMEIKDVRLVYAPAEGIGVFGGETDNWRWPRHTGDWSFLRAYVGQDGKPAAFS KDNVPFKPKHWLKISTEGIKPGELVFVAGYPGRTLRHQTYAQVKETTEWSMPRSIRLAEEQLAILEQLSKQDKTIALKMA GRVQGLNNSLTNQKGMLEGLVKGGSLGMKQAREKELEAWIAADPVRQKKYGDVLPALGALQAESEKTREQSAAMMILTSA SSYLGAAQTAYRLAAERPKADLDREPGFQERDWPRIRDGQDRMQRTMDATADRALLRWALGQAVALPADQRLAAVDQAAG LKAGMAKTEADQAIDAFLERLFAGTKLGDRDFRLSLMEKSKAELLATKDPFILLAAAMEPQAEANRNAAKNRGGAQSRLM PRYMEALLAKSGGLVAPDANSTLRVTYGQVKGVDAKDGLYYKPQTTLGGILEKNTGEGDFDAPKMQLDAIKAQRSGKKTP YIDAGLKGVPVNFLSTVDTTGGNSGSPTLNGKGELVGLLFDGTYESVASNFLFDPTTTRSIHVDSRYMLWNMAEVDGAIH LLQEMSIPDSAAGALLRRGPGLKAAGVR
Sequences:
>Translated_748_residues MLEDTPLKIVRAFLVLLFAAGLLAEEGMWMPQQIPEMAAKLRALGFRGDAKAFADLSGQPMGAIVSLGGCTASFVSPDGL IVTNHHCVTGGLQFNSTPARNLLKDGYLAKTRSEELPNGPGSRVFVTSAVTEVTSAITGNIDAKATDRERYELIERRVKE RIAACEKGGQRCNVASFFAGLKYFEIAQMEIKDVRLVYAPAEGIGVFGGETDNWRWPRHTGDWSFLRAYVGQDGKPAAFS KDNVPFKPKHWLKISTEGIKPGELVFVAGYPGRTLRHQTYAQVKETTEWSMPRSIRLAEEQLAILEQLSKQDKTIALKMA GRVQGLNNSLTNQKGMLEGLVKGGSLGMKQAREKELEAWIAADPVRQKKYGDVLPALGALQAESEKTREQSAAMMILTSA SSYLGAAQTAYRLAAERPKADLDREPGFQERDWPRIRDGQDRMQRTMDATADRALLRWALGQAVALPADQRLAAVDQAAG LKAGMAKTEADQAIDAFLERLFAGTKLGDRDFRLSLMEKSKAELLATKDPFILLAAAMEPQAEANRNAAKNRGGAQSRLM PRYMEALLAKSGGLVAPDANSTLRVTYGQVKGVDAKDGLYYKPQTTLGGILEKNTGEGDFDAPKMQLDAIKAQRSGKKTP YIDAGLKGVPVNFLSTVDTTGGNSGSPTLNGKGELVGLLFDGTYESVASNFLFDPTTTRSIHVDSRYMLWNMAEVDGAIH LLQEMSIPDSAAGALLRRGPGLKAAGVR >Mature_748_residues MLEDTPLKIVRAFLVLLFAAGLLAEEGMWMPQQIPEMAAKLRALGFRGDAKAFADLSGQPMGAIVSLGGCTASFVSPDGL IVTNHHCVTGGLQFNSTPARNLLKDGYLAKTRSEELPNGPGSRVFVTSAVTEVTSAITGNIDAKATDRERYELIERRVKE RIAACEKGGQRCNVASFFAGLKYFEIAQMEIKDVRLVYAPAEGIGVFGGETDNWRWPRHTGDWSFLRAYVGQDGKPAAFS KDNVPFKPKHWLKISTEGIKPGELVFVAGYPGRTLRHQTYAQVKETTEWSMPRSIRLAEEQLAILEQLSKQDKTIALKMA GRVQGLNNSLTNQKGMLEGLVKGGSLGMKQAREKELEAWIAADPVRQKKYGDVLPALGALQAESEKTREQSAAMMILTSA SSYLGAAQTAYRLAAERPKADLDREPGFQERDWPRIRDGQDRMQRTMDATADRALLRWALGQAVALPADQRLAAVDQAAG LKAGMAKTEADQAIDAFLERLFAGTKLGDRDFRLSLMEKSKAELLATKDPFILLAAAMEPQAEANRNAAKNRGGAQSRLM PRYMEALLAKSGGLVAPDANSTLRVTYGQVKGVDAKDGLYYKPQTTLGGILEKNTGEGDFDAPKMQLDAIKAQRSGKKTP YIDAGLKGVPVNFLSTVDTTGGNSGSPTLNGKGELVGLLFDGTYESVASNFLFDPTTTRSIHVDSRYMLWNMAEVDGAIH LLQEMSIPDSAAGALLRRGPGLKAAGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81208; Mature: 81208
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEDTPLKIVRAFLVLLFAAGLLAEEGMWMPQQIPEMAAKLRALGFRGDAKAFADLSGQP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC MGAIVSLGGCTASFVSPDGLIVTNHHCVTGGLQFNSTPARNLLKDGYLAKTRSEELPNGP CEEEEEECCCEEECCCCCCEEEECCEEEECCEEECCCCHHHHHHCCCCCCCCCCCCCCCC GSRVFVTSAVTEVTSAITGNIDAKATDRERYELIERRVKERIAACEKGGQRCNVASFFAG CCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC LKYFEIAQMEIKDVRLVYAPAEGIGVFGGETDNWRWPRHTGDWSFLRAYVGQDGKPAAFS CHHHHHHHEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC KDNVPFKPKHWLKISTEGIKPGELVFVAGYPGRTLRHQTYAQVKETTEWSMPRSIRLAEE CCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH QLAILEQLSKQDKTIALKMAGRVQGLNNSLTNQKGMLEGLVKGGSLGMKQAREKELEAWI HHHHHHHHHCCCCEEEEEECCHHCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH AADPVRQKKYGDVLPALGALQAESEKTREQSAAMMILTSASSYLGAAQTAYRLAAERPKA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCCC DLDREPGFQERDWPRIRDGQDRMQRTMDATADRALLRWALGQAVALPADQRLAAVDQAAG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHCC LKAGMAKTEADQAIDAFLERLFAGTKLGDRDFRLSLMEKSKAELLATKDPFILLAAAMEP CHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHCCHHHEECCCCEEEEEECCCC QAEANRNAAKNRGGAQSRLMPRYMEALLAKSGGLVAPDANSTLRVTYGQVKGVDAKDGLY HHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCEECCCCCCCEE YKPQTTLGGILEKNTGEGDFDAPKMQLDAIKAQRSGKKTPYIDAGLKGVPVNFLSTVDTT ECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHCCCC GGNSGSPTLNGKGELVGLLFDGTYESVASNFLFDPTTTRSIHVDSRYMLWNMAEVDGAIH CCCCCCCCCCCCCCEEEEEECCCHHHHHHCCEECCCCCCEEEECCEEEEEEHHHHHHHHH LLQEMSIPDSAAGALLRRGPGLKAAGVR HHHHCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLEDTPLKIVRAFLVLLFAAGLLAEEGMWMPQQIPEMAAKLRALGFRGDAKAFADLSGQP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC MGAIVSLGGCTASFVSPDGLIVTNHHCVTGGLQFNSTPARNLLKDGYLAKTRSEELPNGP CEEEEEECCCEEECCCCCCEEEECCEEEECCEEECCCCHHHHHHCCCCCCCCCCCCCCCC GSRVFVTSAVTEVTSAITGNIDAKATDRERYELIERRVKERIAACEKGGQRCNVASFFAG CCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC LKYFEIAQMEIKDVRLVYAPAEGIGVFGGETDNWRWPRHTGDWSFLRAYVGQDGKPAAFS CHHHHHHHEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC KDNVPFKPKHWLKISTEGIKPGELVFVAGYPGRTLRHQTYAQVKETTEWSMPRSIRLAEE CCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH QLAILEQLSKQDKTIALKMAGRVQGLNNSLTNQKGMLEGLVKGGSLGMKQAREKELEAWI HHHHHHHHHCCCCEEEEEECCHHCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH AADPVRQKKYGDVLPALGALQAESEKTREQSAAMMILTSASSYLGAAQTAYRLAAERPKA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCCC DLDREPGFQERDWPRIRDGQDRMQRTMDATADRALLRWALGQAVALPADQRLAAVDQAAG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHCC LKAGMAKTEADQAIDAFLERLFAGTKLGDRDFRLSLMEKSKAELLATKDPFILLAAAMEP CHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHCCHHHEECCCCEEEEEECCCC QAEANRNAAKNRGGAQSRLMPRYMEALLAKSGGLVAPDANSTLRVTYGQVKGVDAKDGLY HHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCEECCCCCCCEE YKPQTTLGGILEKNTGEGDFDAPKMQLDAIKAQRSGKKTPYIDAGLKGVPVNFLSTVDTT ECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHCCCC GGNSGSPTLNGKGELVGLLFDGTYESVASNFLFDPTTTRSIHVDSRYMLWNMAEVDGAIH CCCCCCCCCCCCCCEEEEEECCCHHHHHHCCEECCCCCCEEEECCEEEEEEHHHHHHHHH LLQEMSIPDSAAGALLRRGPGLKAAGVR HHHHCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA