| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620281
Identifier: 116620281
GI number: 116620281
Start: 1427946
End: 1428515
Strand: Reverse
Name: 116620281
Synonym: Acid_1158
Alternate gene names: NA
Gene position: 1428515-1427946 (Counterclockwise)
Preceding gene: 116620284
Following gene: 116620279
Centisome position: 14.33
GC content: 62.98
Gene sequence:
>570_bases GTGACGGTCTACGTCAATACATTTTTCGAGAAACGTGTGGAGCAGCTTTTCGATCTCGCGCAGCGGGTGGAGGCGGCGTT CTCCGCCTCCGGACTTGAATACCGCGTTGTCGGTGGTCTTGCGACTTACCTGTATGTGGAAGAGGCGGAACCGGACGCCG GCCGTCTGACCCGCGATATCGATATCGCTGTTCGCCGCCAAGACCTCGAGAAGATCGCGGCCGCCGTCGAACCCTTCGAG CTGCGCTACCGCCACGTTGCCGGGGTCGATATGCTCGTGCAGACCGGCGAACCCACCGCGCGCCGAGCCGTTCACCTGGT CTTCACCGGCGAAAAGGTGCGCCCTGAGTATTCGGAAGCGGTGCCTGAAATCGGCGCCGGTTCCCGCATTAAGGGCATCC GCCTCATCCCGCTCGCCGATCTTGTCCGGATGAAGCTCACGAGTTTCCGCGCCAAGGACGAAGCCCACATAAAGGACTTG GACGAGGCCCGCCTGATCACACCCGACATCGAAGCGCTCCTCTCCGAACCTCTCCGTGCACGGCTCGCGCAGGCCCGCGC GCGCGACTAA
Upstream 100 bases:
>100_bases TTCTGGTCCGTGACAATGACTGTTTCTCGCAAAGACGCAGAGCCGCAAAGTAACGCAAAGAGAGAGAAATCTGAAGATGC GATAATCAATCAGAATCGCC
Downstream 100 bases:
>100_bases CCTGCTACTTCACCAGCGAGCACGGATTTTATCTTCTTTGCGTTCCTCTGCGCCTCTGCGTCTCTGCGAGAAAGGCGCCC CGCCTGGTCCTCACAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTVYVNTFFEKRVEQLFDLAQRVEAAFSASGLEYRVVGGLATYLYVEEAEPDAGRLTRDIDIAVRRQDLEKIAAAVEPFE LRYRHVAGVDMLVQTGEPTARRAVHLVFTGEKVRPEYSEAVPEIGAGSRIKGIRLIPLADLVRMKLTSFRAKDEAHIKDL DEARLITPDIEALLSEPLRARLAQARARD
Sequences:
>Translated_189_residues MTVYVNTFFEKRVEQLFDLAQRVEAAFSASGLEYRVVGGLATYLYVEEAEPDAGRLTRDIDIAVRRQDLEKIAAAVEPFE LRYRHVAGVDMLVQTGEPTARRAVHLVFTGEKVRPEYSEAVPEIGAGSRIKGIRLIPLADLVRMKLTSFRAKDEAHIKDL DEARLITPDIEALLSEPLRARLAQARARD >Mature_188_residues TVYVNTFFEKRVEQLFDLAQRVEAAFSASGLEYRVVGGLATYLYVEEAEPDAGRLTRDIDIAVRRQDLEKIAAAVEPFEL RYRHVAGVDMLVQTGEPTARRAVHLVFTGEKVRPEYSEAVPEIGAGSRIKGIRLIPLADLVRMKLTSFRAKDEAHIKDLD EARLITPDIEALLSEPLRARLAQARARD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21236; Mature: 21104
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVYVNTFFEKRVEQLFDLAQRVEAAFSASGLEYRVVGGLATYLYVEEAEPDAGRLTRDI CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEEECCCCCCCCHHHHH DIAVRRQDLEKIAAAVEPFELRYRHVAGVDMLVQTGEPTARRAVHLVFTGEKVRPEYSEA HHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCHHHHEEEEEEECCCCCCCHHHH VPEIGAGSRIKGIRLIPLADLVRMKLTSFRAKDEAHIKDLDEARLITPDIEALLSEPLRA CCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHCCHHHH RLAQARARD HHHHHHCCC >Mature Secondary Structure TVYVNTFFEKRVEQLFDLAQRVEAAFSASGLEYRVVGGLATYLYVEEAEPDAGRLTRDI EEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEEECCCCCCCCHHHHH DIAVRRQDLEKIAAAVEPFELRYRHVAGVDMLVQTGEPTARRAVHLVFTGEKVRPEYSEA HHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCHHHHEEEEEEECCCCCCCHHHH VPEIGAGSRIKGIRLIPLADLVRMKLTSFRAKDEAHIKDLDEARLITPDIEALLSEPLRA CCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHCCHHHH RLAQARARD HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA