| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620245
Identifier: 116620245
GI number: 116620245
Start: 1379912
End: 1381132
Strand: Direct
Name: 116620245
Synonym: Acid_1122
Alternate gene names: NA
Gene position: 1379912-1381132 (Clockwise)
Preceding gene: 116620244
Following gene: 116620250
Centisome position: 13.85
GC content: 66.26
Gene sequence:
>1221_bases ATGCGAGTGGGCGCGGTGTGCCTGGCGGTAATCCTTGTGACGACGGCGTTGGCCGCGTCGCGCGAGGACCTGCGCAAACA GATGCGGGCCGCACTGTTCGTGCCGGATCCGCTGCCCGCGCTCGCGCCGGAGACCTACGGGCAGAACGAGATCGCGCCGG GCGTGATCGCAGAACGGGTGAGCTATGCCACCGATTACGGGTTGCGCGTGCCCGCGATCGTCTATCGCCCGGCGCAGCGG CCCGCGGGGAAGATGCCGGGGCTGATCGTAGTCAATGGCCACGGCGGCGATAAATACAGCTGGTACGCGTTCTACTCCGG GATTCTGTACGCGCGTGCCGGCGCCACTGTGCTGACGTACGACCCGATCGGCGAGGGCGAGCGCAATGCACAGCGCAAGA ACGGCACCCGCCAGCACGATCGGAACGTGGAGCCGGAGGAGATGGGCCGTCGCATGGGCGGCCTGATGATGACCGACGTG ATGCAGGCGGTCAGCTATCTGGCGCAGCGGCCGGACGTGGATACCAGGCGCCTCGCGGCCATGGGCTACTCGATGGGATC GTTCGTGCTGGGCCTGGCGTGCGCGGCGGAGACGCGGCTGAACGCATGCGTGCTGGTGGGCGGCGGAAACCTGGATGGCG AAGGCGGCTATTGGGATTCGAGCAGCAAGAAGATGTGCCACTCGATCCCCTATGGGGCGATGAAGTTCCTGGGCGATCGC GGGGCGGTGCTGTATGATCTGCACGCCGATCGCGGCGCGACGCTGCTGTGGAACGGGACGGCGGACGATGTGGTCTCGAT TCCGCGCATCGGCGCCGGCTTTTTCGACGACCTGCGCAAGCGAACGATCGCGCTGCATGGCAGTGCCAAGGACGTGTTCG AATTTGGCTTTACGCAGGGGACGGGGCATCGCCCTTACTTCGTGACGCGCCCGGTGGCGTTGTGGCTGGAGCATCGGCTC GACTTTCCCAATTGGACCGTGGAGTCGATCGCGAAGATGCCGGAGACGCACATTCTGGAGTGGGCGGAGAAAGGCGGAGT GCCGATCGACAAAGCCTACGCGACGGAACTGCGCGAGGGTGGCACGCGCGCGCTCGGCGAGGGTGTGCCGGCGGTAGCGC ACGACCGGTTGAACGCGCTGCCGGAAGACCGGTGGCAGCGCGATCGGGAGAAGTACGTGTACGAGTCGTGGCTAAAGGCT GCGCAGGCCAGGTTGAAGTGA
Upstream 100 bases:
>100_bases CGGCAAGAAGATTTCGATGGGCGGTGCCATGGCGGCGGCCTTTGTGCCTTGGCTGATCTGGATCTTCTGCGCGGCGGGAC TGGCCGGAATCTTCAGCTAA
Downstream 100 bases:
>100_bases TGGATCGCGGCTAGTGGCCCACGGGGATGATGACTCCGGTCTGAGTGGCGACGCCGTTGACCTTCAGCAGTAGCTGATAC TCGCCATCGGCCATCGGGGG
Product: dipeptidyl aminopeptidases/acylaminoacyl-peptidase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MRVGAVCLAVILVTTALAASREDLRKQMRAALFVPDPLPALAPETYGQNEIAPGVIAERVSYATDYGLRVPAIVYRPAQR PAGKMPGLIVVNGHGGDKYSWYAFYSGILYARAGATVLTYDPIGEGERNAQRKNGTRQHDRNVEPEEMGRRMGGLMMTDV MQAVSYLAQRPDVDTRRLAAMGYSMGSFVLGLACAAETRLNACVLVGGGNLDGEGGYWDSSSKKMCHSIPYGAMKFLGDR GAVLYDLHADRGATLLWNGTADDVVSIPRIGAGFFDDLRKRTIALHGSAKDVFEFGFTQGTGHRPYFVTRPVALWLEHRL DFPNWTVESIAKMPETHILEWAEKGGVPIDKAYATELREGGTRALGEGVPAVAHDRLNALPEDRWQRDREKYVYESWLKA AQARLK
Sequences:
>Translated_406_residues MRVGAVCLAVILVTTALAASREDLRKQMRAALFVPDPLPALAPETYGQNEIAPGVIAERVSYATDYGLRVPAIVYRPAQR PAGKMPGLIVVNGHGGDKYSWYAFYSGILYARAGATVLTYDPIGEGERNAQRKNGTRQHDRNVEPEEMGRRMGGLMMTDV MQAVSYLAQRPDVDTRRLAAMGYSMGSFVLGLACAAETRLNACVLVGGGNLDGEGGYWDSSSKKMCHSIPYGAMKFLGDR GAVLYDLHADRGATLLWNGTADDVVSIPRIGAGFFDDLRKRTIALHGSAKDVFEFGFTQGTGHRPYFVTRPVALWLEHRL DFPNWTVESIAKMPETHILEWAEKGGVPIDKAYATELREGGTRALGEGVPAVAHDRLNALPEDRWQRDREKYVYESWLKA AQARLK >Mature_406_residues MRVGAVCLAVILVTTALAASREDLRKQMRAALFVPDPLPALAPETYGQNEIAPGVIAERVSYATDYGLRVPAIVYRPAQR PAGKMPGLIVVNGHGGDKYSWYAFYSGILYARAGATVLTYDPIGEGERNAQRKNGTRQHDRNVEPEEMGRRMGGLMMTDV MQAVSYLAQRPDVDTRRLAAMGYSMGSFVLGLACAAETRLNACVLVGGGNLDGEGGYWDSSSKKMCHSIPYGAMKFLGDR GAVLYDLHADRGATLLWNGTADDVVSIPRIGAGFFDDLRKRTIALHGSAKDVFEFGFTQGTGHRPYFVTRPVALWLEHRL DFPNWTVESIAKMPETHILEWAEKGGVPIDKAYATELREGGTRALGEGVPAVAHDRLNALPEDRWQRDREKYVYESWLKA AQARLK
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44668; Mature: 44668
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGAVCLAVILVTTALAASREDLRKQMRAALFVPDPLPALAPETYGQNEIAPGVIAERV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHH SYATDYGLRVPAIVYRPAQRPAGKMPGLIVVNGHGGDKYSWYAFYSGILYARAGATVLTY HHHHCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEE DPIGEGERNAQRKNGTRQHDRNVEPEEMGRRMGGLMMTDVMQAVSYLAQRPDVDTRRLAA CCCCCCCHHHHHCCCCCHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHH MGYSMGSFVLGLACAAETRLNACVLVGGGNLDGEGGYWDSSSKKMCHSIPYGAMKFLGDR HHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCC GAVLYDLHADRGATLLWNGTADDVVSIPRIGAGFFDDLRKRTIALHGSAKDVFEFGFTQG CCEEEEEECCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHEEEECCCHHHHHHHCCCCC TGHRPYFVTRPVALWLEHRLDFPNWTVESIAKMPETHILEWAEKGGVPIDKAYATELREG CCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCC GTRALGEGVPAVAHDRLNALPEDRWQRDREKYVYESWLKAAQARLK CCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRVGAVCLAVILVTTALAASREDLRKQMRAALFVPDPLPALAPETYGQNEIAPGVIAERV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHH SYATDYGLRVPAIVYRPAQRPAGKMPGLIVVNGHGGDKYSWYAFYSGILYARAGATVLTY HHHHCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEE DPIGEGERNAQRKNGTRQHDRNVEPEEMGRRMGGLMMTDVMQAVSYLAQRPDVDTRRLAA CCCCCCCHHHHHCCCCCHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHH MGYSMGSFVLGLACAAETRLNACVLVGGGNLDGEGGYWDSSSKKMCHSIPYGAMKFLGDR HHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCC GAVLYDLHADRGATLLWNGTADDVVSIPRIGAGFFDDLRKRTIALHGSAKDVFEFGFTQG CCEEEEEECCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHEEEECCCHHHHHHHCCCCC TGHRPYFVTRPVALWLEHRLDFPNWTVESIAKMPETHILEWAEKGGVPIDKAYATELREG CCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCC GTRALGEGVPAVAHDRLNALPEDRWQRDREKYVYESWLKAAQARLK CCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA