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The map label for this gene is oxaA [H]

Identifier: 116620215

GI number: 116620215

Start: 1343756

End: 1345495

Strand: Reverse

Name: oxaA [H]

Synonym: Acid_1090

Alternate gene names: 116620215

Gene position: 1345495-1343756 (Counterclockwise)

Preceding gene: 116620216

Following gene: 116620214

Centisome position: 13.5

GC content: 59.66

Gene sequence:

>1740_bases
ATGTCGGAATCAGTAAACGGCGGTAGCAACAACACGGCGCAGCCGCCGAAGAAAGAACTATCGATGGAGGTGCGTCTTCT
ACTGGCCTTCATCCTGATGGGGGCGGTGATGTTCCTGACGCCCTACATCTTCCCGACCCCGAAACCGCCGGCTAAGAAGG
ATGCGGCGACCACCGCCGCGGTGACCCCGTCCCCTGCCGCGGCCGACGCCTCGAATCCGGCCGCGACTGCACCTTCGGGA
CCCGCCGTGGTGGAGGCCGGGTCGCTGCCCGCTGACGCGACGCAGCAGAAGCCCGAGCCAGCCTTCGTCATCAATACCGA
CCTCTACCGCGTCGTACTGAGTAACCAGGGCGCGACGGTTCGCAGCTGGCAGCTCAAGAGGTACAAAGGCAACGACAGCA
AGCCGCTGGATCTGGTCAACTCCGTTTCCGGCCTGGATTTTCCGTTCTCGCTTTACTTTCCGGGCCAAAAGCCGGCGTCC
AATGTCAACTGGACCTGGTACAAACAAACCGGTGATGCGGATGGGCTCGGCGTCACTTATGAATACTCCGATGGCCACGT
GGTGGTGCGGAAGGTGGTGCGATTCCAGAAGGACAGCTATCTTTCGATGGTCTCCTGCGAAGTTACGCTGGATGGCAAGC
CGATTCCTCACCTGCTGCAGTGGCGCGGCGGATTCGGCGACCTGACGCTGACTAACGCCGCCGCCGGCCAGCGAACACTT
TATTTCGATTTGACGACGAATAAGCTTGTGGAGCAGAATCCGAAGGCCGCGGCCAAGGGGCCGATCACCTCGGAAGGCAC
GTTCAGCTTCGCCGGCATCGCCGACACCTACTTCGCCGCGGTGTTCCTGCCGGAAGGTAACGGGCGTATGCAGCAGGTGA
CGTTCGCGGATACGGTGCGCACGCCGACTTCCGAAACACCACTGCCGCTCAGCGGAGTGGCCGTAGGCGATGGCCCGCCG
ATCCGCTTCGAGCTGTTCGTAGGCCCCAAGGATGTCGATATGCTTCGGAAGATCAACCCGAAGCTCGAGCAGGTGGTGGA
TTTCGGCTGGCTTTCGGTGCTGGCCAAGCCGCTCTTCCTGATCGTCAATTACGTCAATGACACGCTGGTGCATAACTTCG
GTTGGGCCATCGTGCTGGTCACGATCGCCATCAACTTCATTCTGTTCCCGCTCAAGTTGAGCAACATGAAGAGCATGCGG
AAGATGCAGGCGCTCAAGCCGCAGGTGGACGCGATCAACGCCAAGTATAAGAACGTCGGGCTGCGCGACCCACGCGCCGC
GGATAAAAACCAGGAGACGATGGATCTGTACAAGAAGCACGGAGTCAACCCGATGGGCGGGTGTCTCCCCATGGTGCTGC
AGATTCCCTTCTTCTTCGCGTTTTATAAGGTGTTCACGGTGAGCGTGGAAATGCGCGGCGCTCCGTGGCTCTGGGTCAGC
GATCTCTCGCAGCCCGAGACGCTGCCGATCAAGATTCTCCCGCTGGTGATGATCGCCAGCCAGTTCGTGATGCAGCGGAT
GACGCCGCAGCCGGCGGGGGACCCCGCACAGCAGAAGATGATGATGTTTATGCCCCTCGTCTTCGGCTTTATGTTCTACA
ATTTCCCCAGTGGGCTGGTGCTATACTACTTGACCAGCAATCTGGTAAGCATGGGGCAGCAGTGGTTCTTTAACAAGACT
TCGATGGCGACGCTTGCCGCCGAGTCGATCGCGCCTCCAAAAAAGAACGGCAGGAAATAA

Upstream 100 bases:

>100_bases
TCTGGATGGGGCTGCGCCGGCTGGCGCGCTGCCATCCCTTTCACGCGGGCGGCTACGATCCCGTCCGCTAATACGTCTTT
CATAACGGAAACTTCTCAGC

Downstream 100 bases:

>100_bases
CCCTTGACTGAGCGAAAGTACTCTGTGTCCACGGTCGGACTGCGAATCGACGGATTCCTGAACACGACTCTCGAAAATGC
GGGTATCAACCTGAAGTACG

Product: protein translocase subunit yidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MSESVNGGSNNTAQPPKKELSMEVRLLLAFILMGAVMFLTPYIFPTPKPPAKKDAATTAAVTPSPAAADASNPAATAPSG
PAVVEAGSLPADATQQKPEPAFVINTDLYRVVLSNQGATVRSWQLKRYKGNDSKPLDLVNSVSGLDFPFSLYFPGQKPAS
NVNWTWYKQTGDADGLGVTYEYSDGHVVVRKVVRFQKDSYLSMVSCEVTLDGKPIPHLLQWRGGFGDLTLTNAAAGQRTL
YFDLTTNKLVEQNPKAAAKGPITSEGTFSFAGIADTYFAAVFLPEGNGRMQQVTFADTVRTPTSETPLPLSGVAVGDGPP
IRFELFVGPKDVDMLRKINPKLEQVVDFGWLSVLAKPLFLIVNYVNDTLVHNFGWAIVLVTIAINFILFPLKLSNMKSMR
KMQALKPQVDAINAKYKNVGLRDPRAADKNQETMDLYKKHGVNPMGGCLPMVLQIPFFFAFYKVFTVSVEMRGAPWLWVS
DLSQPETLPIKILPLVMIASQFVMQRMTPQPAGDPAQQKMMMFMPLVFGFMFYNFPSGLVLYYLTSNLVSMGQQWFFNKT
SMATLAAESIAPPKKNGRK

Sequences:

>Translated_579_residues
MSESVNGGSNNTAQPPKKELSMEVRLLLAFILMGAVMFLTPYIFPTPKPPAKKDAATTAAVTPSPAAADASNPAATAPSG
PAVVEAGSLPADATQQKPEPAFVINTDLYRVVLSNQGATVRSWQLKRYKGNDSKPLDLVNSVSGLDFPFSLYFPGQKPAS
NVNWTWYKQTGDADGLGVTYEYSDGHVVVRKVVRFQKDSYLSMVSCEVTLDGKPIPHLLQWRGGFGDLTLTNAAAGQRTL
YFDLTTNKLVEQNPKAAAKGPITSEGTFSFAGIADTYFAAVFLPEGNGRMQQVTFADTVRTPTSETPLPLSGVAVGDGPP
IRFELFVGPKDVDMLRKINPKLEQVVDFGWLSVLAKPLFLIVNYVNDTLVHNFGWAIVLVTIAINFILFPLKLSNMKSMR
KMQALKPQVDAINAKYKNVGLRDPRAADKNQETMDLYKKHGVNPMGGCLPMVLQIPFFFAFYKVFTVSVEMRGAPWLWVS
DLSQPETLPIKILPLVMIASQFVMQRMTPQPAGDPAQQKMMMFMPLVFGFMFYNFPSGLVLYYLTSNLVSMGQQWFFNKT
SMATLAAESIAPPKKNGRK
>Mature_578_residues
SESVNGGSNNTAQPPKKELSMEVRLLLAFILMGAVMFLTPYIFPTPKPPAKKDAATTAAVTPSPAAADASNPAATAPSGP
AVVEAGSLPADATQQKPEPAFVINTDLYRVVLSNQGATVRSWQLKRYKGNDSKPLDLVNSVSGLDFPFSLYFPGQKPASN
VNWTWYKQTGDADGLGVTYEYSDGHVVVRKVVRFQKDSYLSMVSCEVTLDGKPIPHLLQWRGGFGDLTLTNAAAGQRTLY
FDLTTNKLVEQNPKAAAKGPITSEGTFSFAGIADTYFAAVFLPEGNGRMQQVTFADTVRTPTSETPLPLSGVAVGDGPPI
RFELFVGPKDVDMLRKINPKLEQVVDFGWLSVLAKPLFLIVNYVNDTLVHNFGWAIVLVTIAINFILFPLKLSNMKSMRK
MQALKPQVDAINAKYKNVGLRDPRAADKNQETMDLYKKHGVNPMGGCLPMVLQIPFFFAFYKVFTVSVEMRGAPWLWVSD
LSQPETLPIKILPLVMIASQFVMQRMTPQPAGDPAQQKMMMFMPLVFGFMFYNFPSGLVLYYLTSNLVSMGQQWFFNKTS
MATLAAESIAPPKKNGRK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=299, Percent_Identity=36.1204013377926, Blast_Score=190, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 63603; Mature: 63472

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESVNGGSNNTAQPPKKELSMEVRLLLAFILMGAVMFLTPYIFPTPKPPAKKDAATTAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
VTPSPAAADASNPAATAPSGPAVVEAGSLPADATQQKPEPAFVINTDLYRVVLSNQGATV
ECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCEE
RSWQLKRYKGNDSKPLDLVNSVSGLDFPFSLYFPGQKPASNVNWTWYKQTGDADGLGVTY
EEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEE
EYSDGHVVVRKVVRFQKDSYLSMVSCEVTLDGKPIPHLLQWRGGFGDLTLTNAAAGQRTL
EECCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHCCCCCCEEEECCCCCCEEE
YFDLTTNKLVEQNPKAAAKGPITSEGTFSFAGIADTYFAAVFLPEGNGRMQQVTFADTVR
EEEECCCHHHHCCCCCCCCCCCCCCCCEEECCHHCCEEEEEEEECCCCCEEEEEEHHHCC
TPTSETPLPLSGVAVGDGPPIRFELFVGPKDVDMLRKINPKLEQVVDFGWLSVLAKPLFL
CCCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IVNYVNDTLVHNFGWAIVLVTIAINFILFPLKLSNMKSMRKMQALKPQVDAINAKYKNVG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCC
LRDPRAADKNQETMDLYKKHGVNPMGGCLPMVLQIPFFFAFYKVFTVSVEMRGAPWLWVS
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEC
DLSQPETLPIKILPLVMIASQFVMQRMTPQPAGDPAQQKMMMFMPLVFGFMFYNFPSGLV
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
LYYLTSNLVSMGQQWFFNKTSMATLAAESIAPPKKNGRK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SESVNGGSNNTAQPPKKELSMEVRLLLAFILMGAVMFLTPYIFPTPKPPAKKDAATTAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
VTPSPAAADASNPAATAPSGPAVVEAGSLPADATQQKPEPAFVINTDLYRVVLSNQGATV
ECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCEE
RSWQLKRYKGNDSKPLDLVNSVSGLDFPFSLYFPGQKPASNVNWTWYKQTGDADGLGVTY
EEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEE
EYSDGHVVVRKVVRFQKDSYLSMVSCEVTLDGKPIPHLLQWRGGFGDLTLTNAAAGQRTL
EECCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHCCCCCCEEEECCCCCCEEE
YFDLTTNKLVEQNPKAAAKGPITSEGTFSFAGIADTYFAAVFLPEGNGRMQQVTFADTVR
EEEECCCHHHHCCCCCCCCCCCCCCCCEEECCHHCCEEEEEEEECCCCCEEEEEEHHHCC
TPTSETPLPLSGVAVGDGPPIRFELFVGPKDVDMLRKINPKLEQVVDFGWLSVLAKPLFL
CCCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IVNYVNDTLVHNFGWAIVLVTIAINFILFPLKLSNMKSMRKMQALKPQVDAINAKYKNVG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCC
LRDPRAADKNQETMDLYKKHGVNPMGGCLPMVLQIPFFFAFYKVFTVSVEMRGAPWLWVS
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEC
DLSQPETLPIKILPLVMIASQFVMQRMTPQPAGDPAQQKMMMFMPLVFGFMFYNFPSGLV
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
LYYLTSNLVSMGQQWFFNKTSMATLAAESIAPPKKNGRK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA