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The map label for this gene is ynfM [C]

Identifier: 116620207

GI number: 116620207

Start: 1333096

End: 1334319

Strand: Direct

Name: ynfM [C]

Synonym: Acid_1080

Alternate gene names: 116620207

Gene position: 1333096-1334319 (Clockwise)

Preceding gene: 116620204

Following gene: 116620209

Centisome position: 13.38

GC content: 66.18

Gene sequence:

>1224_bases
ATGGAAAGAATGGTCTCGCAGGCGTCCGCGCCCTCTAAAACCCGGACTGCCGCGGTGGTATTCGCAGGCTTCTGCGCGTT
TGTCACTTTGTTTGCGCCGCAGCCGCTGTTGCCGCTGCTGGCCCGCGAATTTCGCGTCTCGCCGGCCATGATCAGTCTCG
TGGTGACGGCGTCCACCTTGGCCGTGGCGCTGGCCGCGCCCTTCGCCGGTATTGTCGCCGATCGCTTCGGACGCAAGCGC
GTGATTGTGCCGGCGGCCTTCCTGCTGGCGGTGCCGACGCTGCTGGCCGCGACCGCGACGAGTTTCGGACAGCTGTTGTT
CTGGCGCTTCCTGCAAGGAGTGTTCACGCCAGGAATTTTCGCGGTGATCATCGCCTACATCAATGAAGAGTGGGAAGCGG
GCGCGGGCGCGGCGACGGCGGCCTACGTTACGGGAACAGTGATCGGCGGCTTCAGCGGCCGCGCGCTGGCCGCGCTTGTC
GCATCGCACGCCAACTGGCGATGGGCCTTCGTCATGCTAGGAGCGTTGAATCTGCTGGGCGCGTTCGCGATCCGCGCGTG
GCTTCCGGCCGGACGCCGCTTCCAGCGGGCGCGCGGCGGCGGATCGTCGGGCGCGGCCATGCTGCGCCACCTGCGAAATC
CGCGGCTCGTGGCCACCTACGCAGTGGGATTTTGCGTGATGTTCTCGCTGCTCGGGACCTTTACCTACGTGAATTTTTAT
CTGGCGGCGCCGCCCTTCCTGCTGAGTACCGCGGCACTCGGCCTATTGTTCGTGGTCTACCTGGTGGGAGCCGTGGTGAC
GCCGATCGCCGGCCGCGCGATCGATCGCCTCGGCCACCGCTTCGCTTTGGTGATGGCCTTCACGGGCGGTGCGACGGGAG
TGACGCTCACGCTGGTGCACAGCCTTCCAGTGGTGATGCTGGGACTCACGCTGGCCTGCACGGGAGTCTTCATCGCGAAC
TCCGCGGGCTCGAGTTACGTGGGCAGCGCGGCCACCGAATCGCGCGCTTCGGCGGTCGGACTGTATGTGACGTTCTACTA
TGTGGGCGGCAGCGGCGGCTCTGCGGTTCCCGGATTCTTCTGGGCGCGCGGCGGATGGCCGGCGTGCGTCGCGCTGATTG
TCGCGGTGCAGCTGCTGACCATCACGCTGGCCCTGATTTTCTGGAAACCCTTGCCGAAATCGCACATCCCCGCTCCCTTG
ACCGCGGCGATAGAGGAGGGGTGA

Upstream 100 bases:

>100_bases
TCACCCAATGGGGGCAAATCACGCGCGAATCGAAATGTTGAATCTAAGCGATAAAAAGTATTTTTACTCCGAAACCGCCT
GAGTCTCGTGGCAGCGCATA

Downstream 100 bases:

>100_bases
CGTACTTACTCGAACTTGATGCCGGAGAGGTCGGCGATGGGTTTGGGGAAGCGCAGCTTCATGGCGTCGAGTTCCTCGCA
TAAAACCTGCGAGACCGCGA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MERMVSQASAPSKTRTAAVVFAGFCAFVTLFAPQPLLPLLAREFRVSPAMISLVVTASTLAVALAAPFAGIVADRFGRKR
VIVPAAFLLAVPTLLAATATSFGQLLFWRFLQGVFTPGIFAVIIAYINEEWEAGAGAATAAYVTGTVIGGFSGRALAALV
ASHANWRWAFVMLGALNLLGAFAIRAWLPAGRRFQRARGGGSSGAAMLRHLRNPRLVATYAVGFCVMFSLLGTFTYVNFY
LAAPPFLLSTAALGLLFVVYLVGAVVTPIAGRAIDRLGHRFALVMAFTGGATGVTLTLVHSLPVVMLGLTLACTGVFIAN
SAGSSYVGSAATESRASAVGLYVTFYYVGGSGGSAVPGFFWARGGWPACVALIVAVQLLTITLALIFWKPLPKSHIPAPL
TAAIEEG

Sequences:

>Translated_407_residues
MERMVSQASAPSKTRTAAVVFAGFCAFVTLFAPQPLLPLLAREFRVSPAMISLVVTASTLAVALAAPFAGIVADRFGRKR
VIVPAAFLLAVPTLLAATATSFGQLLFWRFLQGVFTPGIFAVIIAYINEEWEAGAGAATAAYVTGTVIGGFSGRALAALV
ASHANWRWAFVMLGALNLLGAFAIRAWLPAGRRFQRARGGGSSGAAMLRHLRNPRLVATYAVGFCVMFSLLGTFTYVNFY
LAAPPFLLSTAALGLLFVVYLVGAVVTPIAGRAIDRLGHRFALVMAFTGGATGVTLTLVHSLPVVMLGLTLACTGVFIAN
SAGSSYVGSAATESRASAVGLYVTFYYVGGSGGSAVPGFFWARGGWPACVALIVAVQLLTITLALIFWKPLPKSHIPAPL
TAAIEEG
>Mature_407_residues
MERMVSQASAPSKTRTAAVVFAGFCAFVTLFAPQPLLPLLAREFRVSPAMISLVVTASTLAVALAAPFAGIVADRFGRKR
VIVPAAFLLAVPTLLAATATSFGQLLFWRFLQGVFTPGIFAVIIAYINEEWEAGAGAATAAYVTGTVIGGFSGRALAALV
ASHANWRWAFVMLGALNLLGAFAIRAWLPAGRRFQRARGGGSSGAAMLRHLRNPRLVATYAVGFCVMFSLLGTFTYVNFY
LAAPPFLLSTAALGLLFVVYLVGAVVTPIAGRAIDRLGHRFALVMAFTGGATGVTLTLVHSLPVVMLGLTLACTGVFIAN
SAGSSYVGSAATESRASAVGLYVTFYYVGGSGGSAVPGFFWARGGWPACVALIVAVQLLTITLALIFWKPLPKSHIPAPL
TAAIEEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=371, Percent_Identity=33.9622641509434, Blast_Score=168, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42501; Mature: 42501

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERMVSQASAPSKTRTAAVVFAGFCAFVTLFAPQPLLPLLAREFRVSPAMISLVVTASTL
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
AVALAAPFAGIVADRFGRKRVIVPAAFLLAVPTLLAATATSFGQLLFWRFLQGVFTPGIF
HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AVIIAYINEEWEAGAGAATAAYVTGTVIGGFSGRALAALVASHANWRWAFVMLGALNLLG
HHHHHHHCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AFAIRAWLPAGRRFQRARGGGSSGAAMLRHLRNPRLVATYAVGFCVMFSLLGTFTYVNFY
HHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
LAAPPFLLSTAALGLLFVVYLVGAVVTPIAGRAIDRLGHRFALVMAFTGGATGVTLTLVH
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECCCCCCHHHHHHH
SLPVVMLGLTLACTGVFIANSAGSSYVGSAATESRASAVGLYVTFYYVGGSGGSAVPGFF
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCCCCCCC
WARGGWPACVALIVAVQLLTITLALIFWKPLPKSHIPAPLTAAIEEG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MERMVSQASAPSKTRTAAVVFAGFCAFVTLFAPQPLLPLLAREFRVSPAMISLVVTASTL
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
AVALAAPFAGIVADRFGRKRVIVPAAFLLAVPTLLAATATSFGQLLFWRFLQGVFTPGIF
HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AVIIAYINEEWEAGAGAATAAYVTGTVIGGFSGRALAALVASHANWRWAFVMLGALNLLG
HHHHHHHCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AFAIRAWLPAGRRFQRARGGGSSGAAMLRHLRNPRLVATYAVGFCVMFSLLGTFTYVNFY
HHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
LAAPPFLLSTAALGLLFVVYLVGAVVTPIAGRAIDRLGHRFALVMAFTGGATGVTLTLVH
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECCCCCCHHHHHHH
SLPVVMLGLTLACTGVFIANSAGSSYVGSAATESRASAVGLYVTFYYVGGSGGSAVPGFF
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCCCCCCC
WARGGWPACVALIVAVQLLTITLALIFWKPLPKSHIPAPLTAAIEEG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]