| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620012
Identifier: 116620012
GI number: 116620012
Start: 1108004
End: 1109314
Strand: Direct
Name: 116620012
Synonym: Acid_0884
Alternate gene names: NA
Gene position: 1108004-1109314 (Clockwise)
Preceding gene: 116620008
Following gene: 116620013
Centisome position: 11.12
GC content: 61.78
Gene sequence:
>1311_bases GTGGGATCCAACGAGAGCGAGATTTCACCCCCGGAATCCGAAAAAGCGGTGCTTCTCACCGAGTCGCTCGACCAGTTGCT GGCCAGCAAGACCTTCAGCCGCAGCGGGCAGCTCAAGCGCCTGCTCGTTTATTTGCGTGATGCGACCGCCAGTACCGATC CCTCCGTGTGGTCGGAGACCTCAATCGGAGCCATTGCCTTCGGCAGGCGCGATTTCAATCCCAAGCTGGACACCATCGTC CGGGTGGAGATGCGCCGTCTCCGGCAGAAGCTCGACGAATATTATGCGGGCGAGGGCGCGGCGTCCGCGCTGAGGCTGCG GTTTGAACGCAACACATACCGTCCTTATGTAGAGCCGCACATTCCGCCGGTGCCGGAACCGCCCGTGGAACCTTCGTTGC CCGATCCGCCGCCACCGCCGGCAGTGACCGGTCGGTCCTTCCGGTCCGGCGTGGTCCTGGGGGCGGTTGGGATGGCGGCC GTGCTGCTTGCCGCCGGTGTTTTGTGGCAGGTTTTTGCGCCCACCGAGAAAGCCTCGCGCCAAATGGCCGAAAGTCCGAT CTGGAGTGGATTTCGTTCTACTAACGTTGTAGTTGCCGTCGGCACTCCCCTTTTCTTTCGTTACCAGGAGGGTTTTGAGC GCAACTATCACACCAATCTCCCCGACGACCTGCAGGTTGCCGAGAAAGTGCTTGCCCACTGGCCGGCCTTTCCCCTGTGG AACTTGTGGGCGCCGTTTGACGACATCGGCGCCGCGGTGAACCTGGACCGGTTCCTGAGCAGCTTGAATTCCACCGCGAC AATCGTATCTGCCCGCCAAATCTCTTACGGCGGGCTGGCGGGGAAGCGCACCATCGTCATGGGACAGCCGCGCGGCGCGC CTCTTCTGGTCGATCTGCTCGCGGAACAGAATTTCCGGCCCGGTCCGCACATCGCCGGCCAGACCTTCGGAGGCTTCGTC AACGCTCACGCCAAGCCGGGCGAACTGGAGCGCTATCCGGGAGCCAATGGCACCCTCATGATGCAGAGCGATGAAAGCAA TCCGGATTATGCCGTTGTAACCAGCATCCGGCTGGCAAACGGCGGCGAAGTCCTCAATGTTTTTGGCGACCGGGCTCAGA CCGGCGCGTACATTATCCGGAAACTCACCGACCCGATGATTGTGATGGAGTTGAACGGCCGGGTCTTCGACCGCAACCGC GCGCACCGGAGCGCTCAGATCGTATTCCGCGTCGATTACAGCCGAGGCACGCCGACCGGCCTGGTATACGTGACCCATCG CGTGCTGTATCCGGACAAAAAGCAGCAATAG
Upstream 100 bases:
>100_bases CACCCAACCGGGAAGTGATAATAGGGTATGATGTTGGCGTGAAACGTGACATTCACGTGAAAACTGTTGCTTAAATCACT GATTTATTAAGGCCTTAGCT
Downstream 100 bases:
>100_bases GTGTCGTTAAGCACCTTTGCTAGAGGAGTCCACCATCCTTCGGCCCAGCGGTTGCATCGTTTCTCCAGGGACTGCTCCCT CGCCCAACCGGACCTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MGSNESEISPPESEKAVLLTESLDQLLASKTFSRSGQLKRLLVYLRDATASTDPSVWSETSIGAIAFGRRDFNPKLDTIV RVEMRRLRQKLDEYYAGEGAASALRLRFERNTYRPYVEPHIPPVPEPPVEPSLPDPPPPPAVTGRSFRSGVVLGAVGMAA VLLAAGVLWQVFAPTEKASRQMAESPIWSGFRSTNVVVAVGTPLFFRYQEGFERNYHTNLPDDLQVAEKVLAHWPAFPLW NLWAPFDDIGAAVNLDRFLSSLNSTATIVSARQISYGGLAGKRTIVMGQPRGAPLLVDLLAEQNFRPGPHIAGQTFGGFV NAHAKPGELERYPGANGTLMMQSDESNPDYAVVTSIRLANGGEVLNVFGDRAQTGAYIIRKLTDPMIVMELNGRVFDRNR AHRSAQIVFRVDYSRGTPTGLVYVTHRVLYPDKKQQ
Sequences:
>Translated_436_residues MGSNESEISPPESEKAVLLTESLDQLLASKTFSRSGQLKRLLVYLRDATASTDPSVWSETSIGAIAFGRRDFNPKLDTIV RVEMRRLRQKLDEYYAGEGAASALRLRFERNTYRPYVEPHIPPVPEPPVEPSLPDPPPPPAVTGRSFRSGVVLGAVGMAA VLLAAGVLWQVFAPTEKASRQMAESPIWSGFRSTNVVVAVGTPLFFRYQEGFERNYHTNLPDDLQVAEKVLAHWPAFPLW NLWAPFDDIGAAVNLDRFLSSLNSTATIVSARQISYGGLAGKRTIVMGQPRGAPLLVDLLAEQNFRPGPHIAGQTFGGFV NAHAKPGELERYPGANGTLMMQSDESNPDYAVVTSIRLANGGEVLNVFGDRAQTGAYIIRKLTDPMIVMELNGRVFDRNR AHRSAQIVFRVDYSRGTPTGLVYVTHRVLYPDKKQQ >Mature_435_residues GSNESEISPPESEKAVLLTESLDQLLASKTFSRSGQLKRLLVYLRDATASTDPSVWSETSIGAIAFGRRDFNPKLDTIVR VEMRRLRQKLDEYYAGEGAASALRLRFERNTYRPYVEPHIPPVPEPPVEPSLPDPPPPPAVTGRSFRSGVVLGAVGMAAV LLAAGVLWQVFAPTEKASRQMAESPIWSGFRSTNVVVAVGTPLFFRYQEGFERNYHTNLPDDLQVAEKVLAHWPAFPLWN LWAPFDDIGAAVNLDRFLSSLNSTATIVSARQISYGGLAGKRTIVMGQPRGAPLLVDLLAEQNFRPGPHIAGQTFGGFVN AHAKPGELERYPGANGTLMMQSDESNPDYAVVTSIRLANGGEVLNVFGDRAQTGAYIIRKLTDPMIVMELNGRVFDRNRA HRSAQIVFRVDYSRGTPTGLVYVTHRVLYPDKKQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48061; Mature: 47930
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSNESEISPPESEKAVLLTESLDQLLASKTFSRSGQLKRLLVYLRDATASTDPSVWSET CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC SIGAIAFGRRDFNPKLDTIVRVEMRRLRQKLDEYYAGEGAASALRLRFERNTYRPYVEPH CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC IPPVPEPPVEPSLPDPPPPPAVTGRSFRSGVVLGAVGMAAVLLAAGVLWQVFAPTEKASR CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH QMAESPIWSGFRSTNVVVAVGTPLFFRYQEGFERNYHTNLPDDLQVAEKVLAHWPAFPLW HHHCCHHHCCCCCCCEEEEECCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCH NLWAPFDDIGAAVNLDRFLSSLNSTATIVSARQISYGGLAGKRTIVMGQPRGAPLLVDLL HHCCCHHHHCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHH AEQNFRPGPHIAGQTFGGFVNAHAKPGELERYPGANGTLMMQSDESNPDYAVVTSIRLAN HHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECC GGEVLNVFGDRAQTGAYIIRKLTDPMIVMELNGRVFDRNRAHRSAQIVFRVDYSRGTPTG CCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCEEEEEEEECCCCCCCE LVYVTHRVLYPDKKQQ EEEEEEEEECCCCCCC >Mature Secondary Structure GSNESEISPPESEKAVLLTESLDQLLASKTFSRSGQLKRLLVYLRDATASTDPSVWSET CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC SIGAIAFGRRDFNPKLDTIVRVEMRRLRQKLDEYYAGEGAASALRLRFERNTYRPYVEPH CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC IPPVPEPPVEPSLPDPPPPPAVTGRSFRSGVVLGAVGMAAVLLAAGVLWQVFAPTEKASR CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH QMAESPIWSGFRSTNVVVAVGTPLFFRYQEGFERNYHTNLPDDLQVAEKVLAHWPAFPLW HHHCCHHHCCCCCCCEEEEECCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCH NLWAPFDDIGAAVNLDRFLSSLNSTATIVSARQISYGGLAGKRTIVMGQPRGAPLLVDLL HHCCCHHHHCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHH AEQNFRPGPHIAGQTFGGFVNAHAKPGELERYPGANGTLMMQSDESNPDYAVVTSIRLAN HHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECC GGEVLNVFGDRAQTGAYIIRKLTDPMIVMELNGRVFDRNRAHRSAQIVFRVDYSRGTPTG CCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCEEEEEEEECCCCCCCE LVYVTHRVLYPDKKQQ EEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA