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The map label for this gene is 116620006

Identifier: 116620006

GI number: 116620006

Start: 1097121

End: 1098185

Strand: Direct

Name: 116620006

Synonym: Acid_0878

Alternate gene names: NA

Gene position: 1097121-1098185 (Clockwise)

Preceding gene: 116620003

Following gene: 116620007

Centisome position: 11.01

GC content: 64.23

Gene sequence:

>1065_bases
ATGGAAACGCCGGGTAGATTGCTCTGGTCCCTCTTCTTCGCATTCGTCGCGTCATCCCAAGGCCAGCAGGATCGCTCGGC
TTTGACCCTGAACAAACAGGCGCTCGACGCGGCGGCGCACTCCGATTACGCCGGCGCGGAACGGCTCTTCGGCGAAGCGC
TCAAAATCTGGCGGAGCCTCGGACCACGCTATGAAGCGCACACTGCTACCACACTCGCCAACCTCGGAGAGATGCTCTGC
AGCTCCGGCAAATGGCGTGAAGGCGCTGGAGCACTGGTGCAAGCCCTGGAGCTTAACCGCCGCTCGCTCGGTCCGAAGCA
TATCCGCACCGTATCGAATCTGGGCTTGCTCGGCCACGCCTATCTGAACCTGGCGGACCTGAATCGCGCCGAGACCGGCT
TCACGGAGGCGCTTGCGATCGAACGGGAACTCTATCCGAACCATATACCGGCTGCCAGTACTCTTCTGGGAATCTCGCTG
CTGCGCCGGCGGCAGGGCAGGTTCGACGAAGCCCTGCAGGCAGGCGAAGAAGGATTGCAGGCGGCGTTGCAGGCTGCCGG
AGAAGCAGACGTCGGCGTAGCCATGGCCTATGAGAATGTCGCGACACTCCACCTGCTCGCCGGCCGGCCGGAGCGGGCCC
TGCCTCTCTTCCGCAGCGCGCACGTCCTTTACGAAAAGACGCTCGGCCCCGCCAGCCCGGCCTTGGCCTCTCTGCTCAGC
CAGGAGGGGCTCGCCCTGCTGAACGACGGCAAAGTGATGCTTGCCGCCATCGAAATGACACAGGCCGCCGACATGCTGCG
CCGCATGGGCCCGGCCGGAGAGTACCGTCTCGCGATAGCGGAAACCAATCTCGCCGTTCTGCGCCTCCGGCAGCACAACC
TTGCCGAAGTCGAGCGCCTTATTACCCACGCTCTCTCCATCGAAGACGCGCATCCTGCCCAGCCTGCCTACGACCTGATT
GCGACGATCGGTGTGCTCGCCGAACTGCGCAAGGCTCAACGCCGCGATGCGGAGGCGGCGGAGCTGATGGCGCGATTGGT
GGTCATCCAGTCGTCGCCCCGTTAA

Upstream 100 bases:

>100_bases
TTACTGCCAGTACAATTCGAGGGCGGCCAGCGTAAATAATTTAACCAAAACCAAAGTAATCTGTCGTACAATTCTCCTAC
CTCAAAGGGTTGGGAAATAA

Downstream 100 bases:

>100_bases
CCGTTATCAATGCATACGTCAATGACGGAGTCGCACGGGAGACACCGCGCCACGTTTTGCCGCTCTTTTCTCTATTGCAA
TCTGCAATTCACTCAAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; NB-ARC Domain-Containing Protein; SEC-C Motif Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Peptidase-Like

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
METPGRLLWSLFFAFVASSQGQQDRSALTLNKQALDAAAHSDYAGAERLFGEALKIWRSLGPRYEAHTATTLANLGEMLC
SSGKWREGAGALVQALELNRRSLGPKHIRTVSNLGLLGHAYLNLADLNRAETGFTEALAIERELYPNHIPAASTLLGISL
LRRRQGRFDEALQAGEEGLQAALQAAGEADVGVAMAYENVATLHLLAGRPERALPLFRSAHVLYEKTLGPASPALASLLS
QEGLALLNDGKVMLAAIEMTQAADMLRRMGPAGEYRLAIAETNLAVLRLRQHNLAEVERLITHALSIEDAHPAQPAYDLI
ATIGVLAELRKAQRRDAEAAELMARLVVIQSSPR

Sequences:

>Translated_354_residues
METPGRLLWSLFFAFVASSQGQQDRSALTLNKQALDAAAHSDYAGAERLFGEALKIWRSLGPRYEAHTATTLANLGEMLC
SSGKWREGAGALVQALELNRRSLGPKHIRTVSNLGLLGHAYLNLADLNRAETGFTEALAIERELYPNHIPAASTLLGISL
LRRRQGRFDEALQAGEEGLQAALQAAGEADVGVAMAYENVATLHLLAGRPERALPLFRSAHVLYEKTLGPASPALASLLS
QEGLALLNDGKVMLAAIEMTQAADMLRRMGPAGEYRLAIAETNLAVLRLRQHNLAEVERLITHALSIEDAHPAQPAYDLI
ATIGVLAELRKAQRRDAEAAELMARLVVIQSSPR
>Mature_354_residues
METPGRLLWSLFFAFVASSQGQQDRSALTLNKQALDAAAHSDYAGAERLFGEALKIWRSLGPRYEAHTATTLANLGEMLC
SSGKWREGAGALVQALELNRRSLGPKHIRTVSNLGLLGHAYLNLADLNRAETGFTEALAIERELYPNHIPAASTLLGISL
LRRRQGRFDEALQAGEEGLQAALQAAGEADVGVAMAYENVATLHLLAGRPERALPLFRSAHVLYEKTLGPASPALASLLS
QEGLALLNDGKVMLAAIEMTQAADMLRRMGPAGEYRLAIAETNLAVLRLRQHNLAEVERLITHALSIEDAHPAQPAYDLI
ATIGVLAELRKAQRRDAEAAELMARLVVIQSSPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38313; Mature: 38313

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPGRLLWSLFFAFVASSQGQQDRSALTLNKQALDAAAHSDYAGAERLFGEALKIWRSL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GPRYEAHTATTLANLGEMLCSSGKWREGAGALVQALELNRRSLGPKHIRTVSNLGLLGHA
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH
YLNLADLNRAETGFTEALAIERELYPNHIPAASTLLGISLLRRRQGRFDEALQAGEEGLQ
HHHHHHCCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AALQAAGEADVGVAMAYENVATLHLLAGRPERALPLFRSAHVLYEKTLGPASPALASLLS
HHHHHCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QEGLALLNDGKVMLAAIEMTQAADMLRRMGPAGEYRLAIAETNLAVLRLRQHNLAEVERL
HCCCEEEECCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCHHHHHHH
ITHALSIEDAHPAQPAYDLIATIGVLAELRKAQRRDAEAAELMARLVVIQSSPR
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
METPGRLLWSLFFAFVASSQGQQDRSALTLNKQALDAAAHSDYAGAERLFGEALKIWRSL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GPRYEAHTATTLANLGEMLCSSGKWREGAGALVQALELNRRSLGPKHIRTVSNLGLLGHA
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH
YLNLADLNRAETGFTEALAIERELYPNHIPAASTLLGISLLRRRQGRFDEALQAGEEGLQ
HHHHHHCCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AALQAAGEADVGVAMAYENVATLHLLAGRPERALPLFRSAHVLYEKTLGPASPALASLLS
HHHHHCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QEGLALLNDGKVMLAAIEMTQAADMLRRMGPAGEYRLAIAETNLAVLRLRQHNLAEVERL
HCCCEEEECCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCHHHHHHH
ITHALSIEDAHPAQPAYDLIATIGVLAELRKAQRRDAEAAELMARLVVIQSSPR
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA