| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620002
Identifier: 116620002
GI number: 116620002
Start: 1091922
End: 1093067
Strand: Direct
Name: 116620002
Synonym: Acid_0874
Alternate gene names: NA
Gene position: 1091922-1093067 (Clockwise)
Preceding gene: 116620001
Following gene: 116620003
Centisome position: 10.96
GC content: 61.26
Gene sequence:
>1146_bases ATGGCGTTGGTGGAACAGATCGCGGGAGCAGTGGTGATGGTGGTCACGCTGCTCGATATCTTCCTGACTGTGCTGTACGC CCGGGCGGGAACCGCGCTGTTCTCGCCTGTGTTGTCCCGCTCGATCTGGCTCGTGTTTCGTCTCGTTTCGCGCCCGTTCG GCCGCAATCGTGGCAGAGTACTGTCATTCTGCGGGCCGGTAATTCTGGTCGCTCTGATTTTCGTCTGGGCCGCCGGACTC GCGCTTGGGTCCGCGCTGATCATCCATCCGCATCTCGGCGGCGGCATCCGCGCGAGCGAAGGCTCCACGCGGCGCGATTT TATGTCGGCGCTGTATGCCGCGGGGACTAGCCTGTCCTTCGTCGGCTCCGGCGACTTCAAGCCTCAATCGGCCGTGTTTC AGGGCCTCTACATGCTGAACTCGCTGATTGGCATGTCCGTCATCTCGCTCGTCCTGACATATCTGATGCAGATTTACAAC GCATTGAAAAGCAGAAACACTTTGGGGCTCACCATTCAGACGCTCTCGAATGACAGCGGTGACGCGGCGGAGCTGATTGC GGGTTTGGGACCACACGGTCAGTTCGATTCCGGATTCAGCAATCTTTCTAGTCTCGCGTCCAACGCTGTTGAGGTGAAGG AATCGCACCACTTCTATCCCCTGCTGTTCTATTTCCGGTTTGCCGAGCCGTACTACTCGGTTTCGCAGACCGCAACCGTG CTGTTCGACAGCGTGTCGCTGCTGAAGAGCGCGCTCAGCGATGAGGACTATAGCTGGCTGAAGGAGTCGGCGACGGTGGC GCAATGCTGGCGGGCCGCGATGCTTCTGGTGGGCATGCTGGAAGACGTATTCCTGCGCGCCGAGCCGGCGCAAGTTCGGT CCCGGCCGGACGTAGGCGTCCGGGAACGGTGGCGAACGCGGTACTTTGCGGCGCTGGAGCGGATGCGCCAGGCCGGCATC AAAACGATCGCCGACCCGGACACCGGGTTCGAGACATACGTCTCGCTCCGTGAGCGATGGGACGGGCACGTCGCCAGGCT GAGCGCATCCATGTTGTACGAGGCTGACGAAATCGACGCGCCGACGTACTGTCCGGAGCTCGTTGCCGCTCGACCACCGT TCGAGCGTCGCCTCCACGACATTTAA
Upstream 100 bases:
>100_bases CAAGGAAGAGTGGTAATACTAAAGCAGCCGCGGAGATCTCAGTATTTTCAGTTCCGCGCCAGCGTTTTCGCAGTGATTCT CTGCCCGCCCGCTAAAAACT
Downstream 100 bases:
>100_bases GAAAGTTCCAGGACGTGTTTGCGAAGGAAAGGAGACATCAATGGATCAGAGACTGAAAGGCCGCCGAATCGCGGCTCTCG CGGCGGACGGCTTCGAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MALVEQIAGAVVMVVTLLDIFLTVLYARAGTALFSPVLSRSIWLVFRLVSRPFGRNRGRVLSFCGPVILVALIFVWAAGL ALGSALIIHPHLGGGIRASEGSTRRDFMSALYAAGTSLSFVGSGDFKPQSAVFQGLYMLNSLIGMSVISLVLTYLMQIYN ALKSRNTLGLTIQTLSNDSGDAAELIAGLGPHGQFDSGFSNLSSLASNAVEVKESHHFYPLLFYFRFAEPYYSVSQTATV LFDSVSLLKSALSDEDYSWLKESATVAQCWRAAMLLVGMLEDVFLRAEPAQVRSRPDVGVRERWRTRYFAALERMRQAGI KTIADPDTGFETYVSLRERWDGHVARLSASMLYEADEIDAPTYCPELVAARPPFERRLHDI
Sequences:
>Translated_381_residues MALVEQIAGAVVMVVTLLDIFLTVLYARAGTALFSPVLSRSIWLVFRLVSRPFGRNRGRVLSFCGPVILVALIFVWAAGL ALGSALIIHPHLGGGIRASEGSTRRDFMSALYAAGTSLSFVGSGDFKPQSAVFQGLYMLNSLIGMSVISLVLTYLMQIYN ALKSRNTLGLTIQTLSNDSGDAAELIAGLGPHGQFDSGFSNLSSLASNAVEVKESHHFYPLLFYFRFAEPYYSVSQTATV LFDSVSLLKSALSDEDYSWLKESATVAQCWRAAMLLVGMLEDVFLRAEPAQVRSRPDVGVRERWRTRYFAALERMRQAGI KTIADPDTGFETYVSLRERWDGHVARLSASMLYEADEIDAPTYCPELVAARPPFERRLHDI >Mature_380_residues ALVEQIAGAVVMVVTLLDIFLTVLYARAGTALFSPVLSRSIWLVFRLVSRPFGRNRGRVLSFCGPVILVALIFVWAAGLA LGSALIIHPHLGGGIRASEGSTRRDFMSALYAAGTSLSFVGSGDFKPQSAVFQGLYMLNSLIGMSVISLVLTYLMQIYNA LKSRNTLGLTIQTLSNDSGDAAELIAGLGPHGQFDSGFSNLSSLASNAVEVKESHHFYPLLFYFRFAEPYYSVSQTATVL FDSVSLLKSALSDEDYSWLKESATVAQCWRAAMLLVGMLEDVFLRAEPAQVRSRPDVGVRERWRTRYFAALERMRQAGIK TIADPDTGFETYVSLRERWDGHVARLSASMLYEADEIDAPTYCPELVAARPPFERRLHDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41989; Mature: 41858
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVEQIAGAVVMVVTLLDIFLTVLYARAGTALFSPVLSRSIWLVFRLVSRPFGRNRGRV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LSFCGPVILVALIFVWAAGLALGSALIIHPHLGGGIRASEGSTRRDFMSALYAAGTSLSF HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE VGSGDFKPQSAVFQGLYMLNSLIGMSVISLVLTYLMQIYNALKSRNTLGLTIQTLSNDSG ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC DAAELIAGLGPHGQFDSGFSNLSSLASNAVEVKESHHFYPLLFYFRFAEPYYSVSQTATV CHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHH LFDSVSLLKSALSDEDYSWLKESATVAQCWRAAMLLVGMLEDVFLRAEPAQVRSRPDVGV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCH RERWRTRYFAALERMRQAGIKTIADPDTGFETYVSLRERWDGHVARLSASMLYEADEIDA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC PTYCPELVAARPPFERRLHDI CCCCHHHHHCCCCHHHHCCCC >Mature Secondary Structure ALVEQIAGAVVMVVTLLDIFLTVLYARAGTALFSPVLSRSIWLVFRLVSRPFGRNRGRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LSFCGPVILVALIFVWAAGLALGSALIIHPHLGGGIRASEGSTRRDFMSALYAAGTSLSF HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE VGSGDFKPQSAVFQGLYMLNSLIGMSVISLVLTYLMQIYNALKSRNTLGLTIQTLSNDSG ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC DAAELIAGLGPHGQFDSGFSNLSSLASNAVEVKESHHFYPLLFYFRFAEPYYSVSQTATV CHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHH LFDSVSLLKSALSDEDYSWLKESATVAQCWRAAMLLVGMLEDVFLRAEPAQVRSRPDVGV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCH RERWRTRYFAALERMRQAGIKTIADPDTGFETYVSLRERWDGHVARLSASMLYEADEIDA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC PTYCPELVAARPPFERRLHDI CCCCHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA