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The map label for this gene is 116619829

Identifier: 116619829

GI number: 116619829

Start: 872629

End: 873768

Strand: Direct

Name: 116619829

Synonym: Acid_0699

Alternate gene names: NA

Gene position: 872629-873768 (Clockwise)

Preceding gene: 116619828

Following gene: 116619831

Centisome position: 8.76

GC content: 64.65

Gene sequence:

>1140_bases
ATGTACCTCATCGGCGACAGCACTGTGGAAGAACGTAAACACGCGGAAGAATGCGCTGCATGCCAGGCGAAGATCGCAAG
CCTCGCGCTACCCCTCTCAGGTTTTCGCGGAGCCGTACGAACCTGGAGCGATCAGGTGAGCGCCAGGGATCGCGCGGCGG
AACTTCGCTGGACCGTGATCCCGGCCTCCGACCATCTGGAGCGGCTGCTGCTGCCGGCAGTCATGGACGTGCCGTGGTAC
CGCTCTTTGTGGAGCGGCATCCGCGATCTTTTTCAGCCCGAGCTGCCGCCGTTGGACATCACTTCCAAGCCGGTGCTGGT
GAGCAATATCTGGGGGCAGTACGGGCGGCAGAAAAAATCGTGGGTCATGTCGGTGGCAATGCAATCGGCGTTCGCGGCTT
TGGTGTTTACGGTGGCGCTCACCCCGACCGTGAGACGTAAGATCACCGGCGAGCCCATGGCGCTGGTGGCGCCCGATGTC
TCCGCCTACCAGCCGCAGGCGGCGCCAAAGAAAGACAGAACCGCGGGTGGCGGAGGAGGAGGCGACCGGTCTCCGCTGCC
GGCCTCGAAGGGACGGGCTCCCCGGTTCGCGCTCAAGCAGTTCACGCCTCCCTTGGCGGTGGTTGCCAATCTCGATCCGA
AGCTGAGCATGGATCCGACGCTGATCGGTCCGCCGGAACTGCAGCCGCCGAACGTGAACATGTCCCAGTTCGGCGATCCA
CTAGGCAGGATCGGCCCGGCATCCAATGGGCCGGGATCGGGAGGAGGCATCGGCTCGGGAAAGGGCGGCGGCGTCGGTTC
CGGCGTGGGTCCGGGCTTCGGGCCGGGTGAAGGCGGCGCCATCGGCGGCGGAGTCTTTCGGATGGGCGGCGGTGTATCGG
CGCCGTCGCTGCTCTCCAAGGTGGAGCCCGAGTACTCCGAGGAGGCGCGCAAGGCGAAATACCAGGGCACGGTGTTGCTT
TATGTCGAGGTGGATACGAACGGCCGGGCGCAGAACATGCGCGTGCTTCACAGCCTGGGACTCGGCCTCGATGAGAAGGC
CATGGAGGCCGTGAAGAAGTGGAGATTCCGCCCCGGCATGAAAGACGGCAAGCCGGTGACGGTTGTCGCGACTGTCGAAG
TCAACTTCCGGTTGCTGTAA

Upstream 100 bases:

>100_bases
TTCGGGCGCTGCATTCGGTGCGCGCCAGGCTGGAGGCAACCAAATGAGCAAACATTTTTCTGAACATTTTACTGAGCACT
TTTCTGAACAAGGAGTCCTT

Downstream 100 bases:

>100_bases
GGGTCTTATTCGTAGCGCAGCGCTTCGATCGGATCCACTTTGGCGGCGCGGCGGGTCGGCTCCCAACAGGCCAACAGCGC
GACGCCGGTGAACAGGAGTC

Product: TonB family protein

Products: NA

Alternate protein names: NB-Like Protein

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MYLIGDSTVEERKHAEECAACQAKIASLALPLSGFRGAVRTWSDQVSARDRAAELRWTVIPASDHLERLLLPAVMDVPWY
RSLWSGIRDLFQPELPPLDITSKPVLVSNIWGQYGRQKKSWVMSVAMQSAFAALVFTVALTPTVRRKITGEPMALVAPDV
SAYQPQAAPKKDRTAGGGGGGDRSPLPASKGRAPRFALKQFTPPLAVVANLDPKLSMDPTLIGPPELQPPNVNMSQFGDP
LGRIGPASNGPGSGGGIGSGKGGGVGSGVGPGFGPGEGGAIGGGVFRMGGGVSAPSLLSKVEPEYSEEARKAKYQGTVLL
YVEVDTNGRAQNMRVLHSLGLGLDEKAMEAVKKWRFRPGMKDGKPVTVVATVEVNFRLL

Sequences:

>Translated_379_residues
MYLIGDSTVEERKHAEECAACQAKIASLALPLSGFRGAVRTWSDQVSARDRAAELRWTVIPASDHLERLLLPAVMDVPWY
RSLWSGIRDLFQPELPPLDITSKPVLVSNIWGQYGRQKKSWVMSVAMQSAFAALVFTVALTPTVRRKITGEPMALVAPDV
SAYQPQAAPKKDRTAGGGGGGDRSPLPASKGRAPRFALKQFTPPLAVVANLDPKLSMDPTLIGPPELQPPNVNMSQFGDP
LGRIGPASNGPGSGGGIGSGKGGGVGSGVGPGFGPGEGGAIGGGVFRMGGGVSAPSLLSKVEPEYSEEARKAKYQGTVLL
YVEVDTNGRAQNMRVLHSLGLGLDEKAMEAVKKWRFRPGMKDGKPVTVVATVEVNFRLL
>Mature_379_residues
MYLIGDSTVEERKHAEECAACQAKIASLALPLSGFRGAVRTWSDQVSARDRAAELRWTVIPASDHLERLLLPAVMDVPWY
RSLWSGIRDLFQPELPPLDITSKPVLVSNIWGQYGRQKKSWVMSVAMQSAFAALVFTVALTPTVRRKITGEPMALVAPDV
SAYQPQAAPKKDRTAGGGGGGDRSPLPASKGRAPRFALKQFTPPLAVVANLDPKLSMDPTLIGPPELQPPNVNMSQFGDP
LGRIGPASNGPGSGGGIGSGKGGGVGSGVGPGFGPGEGGAIGGGVFRMGGGVSAPSLLSKVEPEYSEEARKAKYQGTVLL
YVEVDTNGRAQNMRVLHSLGLGLDEKAMEAVKKWRFRPGMKDGKPVTVVATVEVNFRLL

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40118; Mature: 40118

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLIGDSTVEERKHAEECAACQAKIASLALPLSGFRGAVRTWSDQVSARDRAAELRWTVI
CEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
PASDHLERLLLPAVMDVPWYRSLWSGIRDLFQPELPPLDITSKPVLVSNIWGQYGRQKKS
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHH
WVMSVAMQSAFAALVFTVALTPTVRRKITGEPMALVAPDVSAYQPQAAPKKDRTAGGGGG
HHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEECCCCHHCCCCCCCCCCCCCCCCCC
GDRSPLPASKGRAPRFALKQFTPPLAVVANLDPKLSMDPTLIGPPELQPPNVNMSQFGDP
CCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
LGRIGPASNGPGSGGGIGSGKGGGVGSGVGPGFGPGEGGAIGGGVFRMGGGVSAPSLLSK
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHH
VEPEYSEEARKAKYQGTVLLYVEVDTNGRAQNMRVLHSLGLGLDEKAMEAVKKWRFRPGM
CCCCHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
KDGKPVTVVATVEVNFRLL
CCCCCEEEEEEEEEEEEEC
>Mature Secondary Structure
MYLIGDSTVEERKHAEECAACQAKIASLALPLSGFRGAVRTWSDQVSARDRAAELRWTVI
CEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
PASDHLERLLLPAVMDVPWYRSLWSGIRDLFQPELPPLDITSKPVLVSNIWGQYGRQKKS
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHH
WVMSVAMQSAFAALVFTVALTPTVRRKITGEPMALVAPDVSAYQPQAAPKKDRTAGGGGG
HHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEECCCCHHCCCCCCCCCCCCCCCCCC
GDRSPLPASKGRAPRFALKQFTPPLAVVANLDPKLSMDPTLIGPPELQPPNVNMSQFGDP
CCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
LGRIGPASNGPGSGGGIGSGKGGGVGSGVGPGFGPGEGGAIGGGVFRMGGGVSAPSLLSK
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHH
VEPEYSEEARKAKYQGTVLLYVEVDTNGRAQNMRVLHSLGLGLDEKAMEAVKKWRFRPGM
CCCCHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
KDGKPVTVVATVEVNFRLL
CCCCCEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA