| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116619743
Identifier: 116619743
GI number: 116619743
Start: 746313
End: 747977
Strand: Direct
Name: 116619743
Synonym: Acid_0608
Alternate gene names: NA
Gene position: 746313-747977 (Clockwise)
Preceding gene: 116619739
Following gene: 116619744
Centisome position: 7.49
GC content: 57.66
Gene sequence:
>1665_bases ATGGGACATCGACGGGGCCAGCCGAGAGAACAGAATGTGCGCCGGATCCATTCGGCTGCATGGCCGCTTCTCGCGGCCGC AATCGTGCTCCTAACAGTTTATCTGCTCAACCCCATTCGGGAGATGCCGTTGGAGGACGACTGGGCCTATGCCCGCACCG TCGAACGCCTCGTTCAGACCGGCAGGTATGAACTTCACCCATGGCTCTCCGCCAACATGCCATTTCAAGCATTCTGGGGC GCGATGTTTACACTGCTCCTGGGGTCGGGTTTTGCATCATTACGAATCTCGACACTTGTCCTGTCGATGGGCGGCCTTTA TGCTTTCTTCCGCCTTCTGCGCATCGGCGGACGGTCCCAGGCCGAATCGTCGGTTGGCGTCCTTCTGCTTTGGTCCAGCC CCCTTTACCTGCGATTCAGCTTCAACTTCATGACTGATGTACCGTTTACTGCCCTGATGTTGATCAGTTTATGGCTGTAT AGCGTGGCCTGGTCCCGGATGGCCTACGGGATGATGGCGATCGCCGCAGCGGCCGGAACGGCCACCGTGCTGACGCGCCA GTTCGGTTTGGTATTGATCCCCGGGCTGGTGGCGATGGCGTGGATGCGCCGGTTCGGCGCGCGAACGCCCGCGCTCGTGT CCGTGGCAGTCATCCCCCTGGTCATCGCCGCAATCTATCAACTTACGATGGGCATTGCCGCTCCCACATGGGCCCAGCAC GTCAATCTGCAGGCGCAGCAAGCCCTAATGAACAATTGGCGCCTGCAACTGTACGAGTTATTGTGGCGCCCTGGTGTGAT GTTGCAATACCTCTGCCTTTTTACCCTCCCGCTCGCAGTTGCTGTCTTTATCCAATGCTTACATCAGTCGTCCGCCGAGT TCCGTTCTCGCGGGTTCCTTCGTATTTCCTTTGGTGTTGCGGTTACTCTGTGTGTCTGCATCGTCACCGGCCTGGCCGCC CACAAAGGCGTTATGCTACCGACCATACCCTGGAACTTTGAGGAATTGCGCGATCTCAGCAGGACGGCGAGACTATCACT GACGGCAATCATCATGGTCATCGCGGTGCCTCACATGGCAAGCCTGATTACCCGTATCCGAGCAGATCTTTCCTCTCAGA ATCCTGAAGTCACCGCCGTCCTCTTTCATGCGACCATTCTCGCTCTTCTGCCACTTACTCTTGCTTATCATCAGTTCGGC GATGAGTATCTTCTGGTGTATGCGGCCTGGGTAATCTGGACCATTTCACGCTGGTCCGCGCTGCGGTCCCGGTCCACGAT TTTGGCCCTGGCGATGGCAGCTTTGTTCCAACTTGCGCTCGTCACGATCTGGGTGGATGAGATACTGAGTCGCAACCAAG TGCAGTGGCAGGCGGCGCGGAATACCGTTGAGCGCCTTCACATATCACCCGCCAGCGTCTCTGCCGGATGGACATGGGCC ACGTATTATGCTTTCGAGGACTACCTGGTACGACATCCGTCATACGGCCAGGTTGATTTCACCAGTCTGTTTCAGGAATG GCTTCCCACCTACGATAACCGCGCCGCATATCGGGTGGAAGTCAGCGATCGCAGCAAATCATCGCCTTCCGGCGATCCTA CCCTGGTGCAGCGGCAGACATTGACGGGTCATGTTCTGCAGGCACGCGCGGTACGAGTCCGTTGA
Upstream 100 bases:
>100_bases CACAACGTAGTGTGTCGCTCTCATCCTTGCGGCCCCGGAAGTCGGCGATATAGACTCCAGGTTTGGGTTTTCGGTCCCTA CCTGACCGCGGGGTGCATTC
Downstream 100 bases:
>100_bases TGCATTCCCGTCAACCGGCCGTCAAGCGCGAGCGATCGCTGGTCCTCGCGGTTACGCTCCCAATGCGAAACTCCGATCTG CAGTAAGTTTGCGCCCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MGHRRGQPREQNVRRIHSAAWPLLAAAIVLLTVYLLNPIREMPLEDDWAYARTVERLVQTGRYELHPWLSANMPFQAFWG AMFTLLLGSGFASLRISTLVLSMGGLYAFFRLLRIGGRSQAESSVGVLLLWSSPLYLRFSFNFMTDVPFTALMLISLWLY SVAWSRMAYGMMAIAAAAGTATVLTRQFGLVLIPGLVAMAWMRRFGARTPALVSVAVIPLVIAAIYQLTMGIAAPTWAQH VNLQAQQALMNNWRLQLYELLWRPGVMLQYLCLFTLPLAVAVFIQCLHQSSAEFRSRGFLRISFGVAVTLCVCIVTGLAA HKGVMLPTIPWNFEELRDLSRTARLSLTAIIMVIAVPHMASLITRIRADLSSQNPEVTAVLFHATILALLPLTLAYHQFG DEYLLVYAAWVIWTISRWSALRSRSTILALAMAALFQLALVTIWVDEILSRNQVQWQAARNTVERLHISPASVSAGWTWA TYYAFEDYLVRHPSYGQVDFTSLFQEWLPTYDNRAAYRVEVSDRSKSSPSGDPTLVQRQTLTGHVLQARAVRVR
Sequences:
>Translated_554_residues MGHRRGQPREQNVRRIHSAAWPLLAAAIVLLTVYLLNPIREMPLEDDWAYARTVERLVQTGRYELHPWLSANMPFQAFWG AMFTLLLGSGFASLRISTLVLSMGGLYAFFRLLRIGGRSQAESSVGVLLLWSSPLYLRFSFNFMTDVPFTALMLISLWLY SVAWSRMAYGMMAIAAAAGTATVLTRQFGLVLIPGLVAMAWMRRFGARTPALVSVAVIPLVIAAIYQLTMGIAAPTWAQH VNLQAQQALMNNWRLQLYELLWRPGVMLQYLCLFTLPLAVAVFIQCLHQSSAEFRSRGFLRISFGVAVTLCVCIVTGLAA HKGVMLPTIPWNFEELRDLSRTARLSLTAIIMVIAVPHMASLITRIRADLSSQNPEVTAVLFHATILALLPLTLAYHQFG DEYLLVYAAWVIWTISRWSALRSRSTILALAMAALFQLALVTIWVDEILSRNQVQWQAARNTVERLHISPASVSAGWTWA TYYAFEDYLVRHPSYGQVDFTSLFQEWLPTYDNRAAYRVEVSDRSKSSPSGDPTLVQRQTLTGHVLQARAVRVR >Mature_553_residues GHRRGQPREQNVRRIHSAAWPLLAAAIVLLTVYLLNPIREMPLEDDWAYARTVERLVQTGRYELHPWLSANMPFQAFWGA MFTLLLGSGFASLRISTLVLSMGGLYAFFRLLRIGGRSQAESSVGVLLLWSSPLYLRFSFNFMTDVPFTALMLISLWLYS VAWSRMAYGMMAIAAAAGTATVLTRQFGLVLIPGLVAMAWMRRFGARTPALVSVAVIPLVIAAIYQLTMGIAAPTWAQHV NLQAQQALMNNWRLQLYELLWRPGVMLQYLCLFTLPLAVAVFIQCLHQSSAEFRSRGFLRISFGVAVTLCVCIVTGLAAH KGVMLPTIPWNFEELRDLSRTARLSLTAIIMVIAVPHMASLITRIRADLSSQNPEVTAVLFHATILALLPLTLAYHQFGD EYLLVYAAWVIWTISRWSALRSRSTILALAMAALFQLALVTIWVDEILSRNQVQWQAARNTVERLHISPASVSAGWTWAT YYAFEDYLVRHPSYGQVDFTSLFQEWLPTYDNRAAYRVEVSDRSKSSPSGDPTLVQRQTLTGHVLQARAVRVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62299; Mature: 62168
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHRRGQPREQNVRRIHSAAWPLLAAAIVLLTVYLLNPIREMPLEDDWAYARTVERLVQT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC GRYELHPWLSANMPFQAFWGAMFTLLLGSGFASLRISTLVLSMGGLYAFFRLLRIGGRSQ CCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AESSVGVLLLWSSPLYLRFSFNFMTDVPFTALMLISLWLYSVAWSRMAYGMMAIAAAAGT CCCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ATVLTRQFGLVLIPGLVAMAWMRRFGARTPALVSVAVIPLVIAAIYQLTMGIAAPTWAQH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VNLQAQQALMNNWRLQLYELLWRPGVMLQYLCLFTLPLAVAVFIQCLHQSSAEFRSRGFL CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE RISFGVAVTLCVCIVTGLAAHKGVMLPTIPWNFEELRDLSRTARLSLTAIIMVIAVPHMA EEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLITRIRADLSSQNPEVTAVLFHATILALLPLTLAYHQFGDEYLLVYAAWVIWTISRWSA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LRSRSTILALAMAALFQLALVTIWVDEILSRNQVQWQAARNTVERLHISPASVSAGWTWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH TYYAFEDYLVRHPSYGQVDFTSLFQEWLPTYDNRAAYRVEVSDRSKSSPSGDPTLVQRQT HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEHHH LTGHVLQARAVRVR HHHHHHHHHHHCCC >Mature Secondary Structure GHRRGQPREQNVRRIHSAAWPLLAAAIVLLTVYLLNPIREMPLEDDWAYARTVERLVQT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC GRYELHPWLSANMPFQAFWGAMFTLLLGSGFASLRISTLVLSMGGLYAFFRLLRIGGRSQ CCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AESSVGVLLLWSSPLYLRFSFNFMTDVPFTALMLISLWLYSVAWSRMAYGMMAIAAAAGT CCCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ATVLTRQFGLVLIPGLVAMAWMRRFGARTPALVSVAVIPLVIAAIYQLTMGIAAPTWAQH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VNLQAQQALMNNWRLQLYELLWRPGVMLQYLCLFTLPLAVAVFIQCLHQSSAEFRSRGFL CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE RISFGVAVTLCVCIVTGLAAHKGVMLPTIPWNFEELRDLSRTARLSLTAIIMVIAVPHMA EEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLITRIRADLSSQNPEVTAVLFHATILALLPLTLAYHQFGDEYLLVYAAWVIWTISRWSA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LRSRSTILALAMAALFQLALVTIWVDEILSRNQVQWQAARNTVERLHISPASVSAGWTWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH TYYAFEDYLVRHPSYGQVDFTSLFQEWLPTYDNRAAYRVEVSDRSKSSPSGDPTLVQRQT HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEHHH LTGHVLQARAVRVR HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA