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The map label for this gene is ybgF [C]

Identifier: 116619653

GI number: 116619653

Start: 626861

End: 627793

Strand: Direct

Name: ybgF [C]

Synonym: Acid_0514

Alternate gene names: 116619653

Gene position: 626861-627793 (Clockwise)

Preceding gene: 116619652

Following gene: 116619654

Centisome position: 6.29

GC content: 62.59

Gene sequence:

>933_bases
ATGAAATCCCGAAGCCTTTTGGTTTGCATTCTGCTCGCGGCGCCGGTGCTTGCACCCGCCGCCAGCAAGGAAATTCAGGA
ACTGCAGCGCGACGTGGCGCTGCTCCAGCAGCAGATCAAAGACCTTCAGAGGTCCCAGGACGAAAAGTTGGTGACCATCA
CCGAACTGGCCCGCCAGGCCATCGAAGCCGCCAATCGTGCCAGCACCGGTGTCGCCGTCATCACCAGTAATCTCGATAAG
AACCTGCGCGACCAGACCGACAAGGTCACCACCCCGGTGGTCGGCATGAACGCCAAGATGAATGAGGTGAGCGGCGACGT
TCGCACCCTCCAGCAGGCCGTAGGCGACCTGACCGCGCTGATGGGCCGCATGCAGGCCCAATTAACCGACATCAGCAACT
CCGTCAAAGTGATGCAGGCGCCGCCCGCCGCCCCGCCCCAGCCCACCGGCGGCGGCGCTCCCGGCGCGTCCGGAGCCGGA
GCCTCCGACATGCCTCCCATGCCCGCCCAGAAGCTTTACGACACCGCTCGTGGGGATTATCAGGGCGGCAAGTACGACCT
CGCTGTGCAGGAGTTCGCCGATTACCTGAAGTATTACGGCAATACCGATCTGGCCCCCAACGCCCAGTTTTACGTCGCCA
TGATTCACTACGGCCAGAAGAATTATGACGACGCCGTCAAGGAATTTGACATGGTCCTGGAGAAATACCCCGACAATAAT
AAGACGCCGGAGGCTCTGCTCTACAAGGGACGCGCGCTGGTCAAGATGCCGGGCCACAAGACCGATGGCGCCGCCGAGTT
CATGGAGGTGATCAGGCGCTTCCCCAAGACCGATGAGGCCCAGCAGGCGTGCACGGAGCGCAAGACGCTCGGCCTGAACT
GCGGCGCGCCGGCCGCGTCCACCGCGCACTCGCCGGCCAAGCGCAAGAAATAA

Upstream 100 bases:

>100_bases
GTGACCGTGAGGGAGCGATCCATTCAGTTTGCATCCCTCACAGTACGATAGAAGGGTAGGCTGGCCTGACCGCCGGCCTG
CCCATGATGAGGAGAGCTGT

Downstream 100 bases:

>100_bases
TGGCCCCGCCCCCCACCTACGAAGCGCTCGCCAAGCTGATCGACCATCCCCTGGTCAAGCCCGAACTCACCGATGAAGAC
GTCATCGCAGGCGTGGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; TPR Domain Protein; L System Periplasmic Component; Tetratricopeptide Domain-Containing Protein; L-Pal System YbgF; Aspartyl/Asparaginyl Beta-Hydroxylase; Periplasmic Protein; Exported Protein

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKSRSLLVCILLAAPVLAPAASKEIQELQRDVALLQQQIKDLQRSQDEKLVTITELARQAIEAANRASTGVAVITSNLDK
NLRDQTDKVTTPVVGMNAKMNEVSGDVRTLQQAVGDLTALMGRMQAQLTDISNSVKVMQAPPAAPPQPTGGGAPGASGAG
ASDMPPMPAQKLYDTARGDYQGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHYGQKNYDDAVKEFDMVLEKYPDNN
KTPEALLYKGRALVKMPGHKTDGAAEFMEVIRRFPKTDEAQQACTERKTLGLNCGAPAASTAHSPAKRKK

Sequences:

>Translated_310_residues
MKSRSLLVCILLAAPVLAPAASKEIQELQRDVALLQQQIKDLQRSQDEKLVTITELARQAIEAANRASTGVAVITSNLDK
NLRDQTDKVTTPVVGMNAKMNEVSGDVRTLQQAVGDLTALMGRMQAQLTDISNSVKVMQAPPAAPPQPTGGGAPGASGAG
ASDMPPMPAQKLYDTARGDYQGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHYGQKNYDDAVKEFDMVLEKYPDNN
KTPEALLYKGRALVKMPGHKTDGAAEFMEVIRRFPKTDEAQQACTERKTLGLNCGAPAASTAHSPAKRKK
>Mature_310_residues
MKSRSLLVCILLAAPVLAPAASKEIQELQRDVALLQQQIKDLQRSQDEKLVTITELARQAIEAANRASTGVAVITSNLDK
NLRDQTDKVTTPVVGMNAKMNEVSGDVRTLQQAVGDLTALMGRMQAQLTDISNSVKVMQAPPAAPPQPTGGGAPGASGAG
ASDMPPMPAQKLYDTARGDYQGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHYGQKNYDDAVKEFDMVLEKYPDNN
KTPEALLYKGRALVKMPGHKTDGAAEFMEVIRRFPKTDEAQQACTERKTLGLNCGAPAASTAHSPAKRKK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33530; Mature: 33530

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRSLLVCILLAAPVLAPAASKEIQELQRDVALLQQQIKDLQRSQDEKLVTITELARQA
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
IEAANRASTGVAVITSNLDKNLRDQTDKVTTPVVGMNAKMNEVSGDVRTLQQAVGDLTAL
HHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH
MGRMQAQLTDISNSVKVMQAPPAAPPQPTGGGAPGASGAGASDMPPMPAQKLYDTARGDY
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
QGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHYGQKNYDDAVKEFDMVLEKYPDNN
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
KTPEALLYKGRALVKMPGHKTDGAAEFMEVIRRFPKTDEAQQACTERKTLGLNCGAPAAS
CCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
TAHSPAKRKK
CCCCCHHCCC
>Mature Secondary Structure
MKSRSLLVCILLAAPVLAPAASKEIQELQRDVALLQQQIKDLQRSQDEKLVTITELARQA
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
IEAANRASTGVAVITSNLDKNLRDQTDKVTTPVVGMNAKMNEVSGDVRTLQQAVGDLTAL
HHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH
MGRMQAQLTDISNSVKVMQAPPAAPPQPTGGGAPGASGAGASDMPPMPAQKLYDTARGDY
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
QGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHYGQKNYDDAVKEFDMVLEKYPDNN
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
KTPEALLYKGRALVKMPGHKTDGAAEFMEVIRRFPKTDEAQQACTERKTLGLNCGAPAAS
CCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
TAHSPAKRKK
CCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA