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The map label for this gene is atpF

Identifier: 116619600

GI number: 116619600

Start: 565774

End: 566370

Strand: Direct

Name: atpF

Synonym: Acid_0461

Alternate gene names: 116619600

Gene position: 565774-566370 (Clockwise)

Preceding gene: 116619599

Following gene: 116619601

Centisome position: 5.68

GC content: 66.0

Gene sequence:

>597_bases
ATGAGGCGCCTCGCCGTCTACCTCGCCATAGCCGTGGGCCTCTTCGCCCAGGCTCCCAAGGAAGGCGCCAGGGAATCCCT
CGCCGAGAAGGCCGATGAGGCCGGTAACAAAGCCCACGCCGCCGAAGAGGAAGGCAGCATGGATATCTGGAAATGGGCCA
ACTTCCTCATCCTCGCCGGCGGCCTCGGGTATCTGGTCGGCAAGAACGCCGGACCCTTCTTCGCGGCGCGCTCCGCCGGC
ATTCGCAAGGACATGGAAAACTCGCTCGCTCAGCAGAAGGATGCCGAAGCCCGCGCCGCCGATGTGGATCGCCGCCTCGC
CAACATGGAGGCCGATATCGCCGCCCTGCGCGGCGAAGGCGAGCGCGCCGCCCGCGCCGAAGCCGAGCGCATGGAGCAGC
ACACCGCCGCCGAGATCGCCAAAATCCAGCAGCACTCCGAGCAGGAAATCGCTTCCGCCGGCAAGGCTGCCCGCATGGAT
TTGAAGCGCTATGCCGCGGAGTTGGCCGTCGAGCTGGCTGAGCAGAAGGTCCGCGCCCGCATGACGCCTGAGACCCAGGA
CGCGCTGGTGCAAGGATTCGTACGTAACCTGAAATGA

Upstream 100 bases:

>100_bases
TGCTCGCTGCCGACGTCGAAGCCGCTCAAAAGTCGCTCGCCGCCGAGAGCGACGCCCTCGCCAACCAGATCGCGGATTCC
ATCCTCCGTCGGAGCGCGGC

Downstream 100 bases:

>100_bases
CACTCTCTGCCGTAGCCACGCGATATGCCAACGCGCTCGCGGACGTAGTGAGTCCGGGCTCGAGCCCGATTCGTCCCGAA
GCCGCGCTCGAAGAGCTGCG

Product: H+-transporting two-sector ATPase, B/B' subunit

Products: NA

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRRLAVYLAIAVGLFAQAPKEGARESLAEKADEAGNKAHAAEEEGSMDIWKWANFLILAGGLGYLVGKNAGPFFAARSAG
IRKDMENSLAQQKDAEARAADVDRRLANMEADIAALRGEGERAARAEAERMEQHTAAEIAKIQQHSEQEIASAGKAARMD
LKRYAAELAVELAEQKVRARMTPETQDALVQGFVRNLK

Sequences:

>Translated_198_residues
MRRLAVYLAIAVGLFAQAPKEGARESLAEKADEAGNKAHAAEEEGSMDIWKWANFLILAGGLGYLVGKNAGPFFAARSAG
IRKDMENSLAQQKDAEARAADVDRRLANMEADIAALRGEGERAARAEAERMEQHTAAEIAKIQQHSEQEIASAGKAARMD
LKRYAAELAVELAEQKVRARMTPETQDALVQGFVRNLK
>Mature_198_residues
MRRLAVYLAIAVGLFAQAPKEGARESLAEKADEAGNKAHAAEEEGSMDIWKWANFLILAGGLGYLVGKNAGPFFAARSAG
IRKDMENSLAQQKDAEARAADVDRRLANMEADIAALRGEGERAARAEAERMEQHTAAEIAKIQQHSEQEIASAGKAARMD
LKRYAAELAVELAEQKVRARMTPETQDALVQGFVRNLK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_SOLUE (Q02BU5)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_821756.1
- STRING:   Q02BU5
- GeneID:   4431464
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_0461
- eggNOG:   NOG81464
- OMA:   WALKKAN
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: NA

Molecular weight: Translated: 21534; Mature: 21534

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x139e0270)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLAVYLAIAVGLFAQAPKEGARESLAEKADEAGNKAHAAEEEGSMDIWKWANFLILAG
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHC
GLGYLVGKNAGPFFAARSAGIRKDMENSLAQQKDAEARAADVDRRLANMEADIAALRGEG
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ERAARAEAERMEQHTAAEIAKIQQHSEQEIASAGKAARMDLKRYAAELAVELAEQKVRAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MTPETQDALVQGFVRNLK
CCCCHHHHHHHHHHHHCH
>Mature Secondary Structure
MRRLAVYLAIAVGLFAQAPKEGARESLAEKADEAGNKAHAAEEEGSMDIWKWANFLILAG
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHC
GLGYLVGKNAGPFFAARSAGIRKDMENSLAQQKDAEARAADVDRRLANMEADIAALRGEG
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ERAARAEAERMEQHTAAEIAKIQQHSEQEIASAGKAARMDLKRYAAELAVELAEQKVRAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MTPETQDALVQGFVRNLK
CCCCHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA