Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is yvlD [H]

Identifier: 116619589

GI number: 116619589

Start: 554784

End: 555134

Strand: Direct

Name: yvlD [H]

Synonym: Acid_0450

Alternate gene names: 116619589

Gene position: 554784-555134 (Clockwise)

Preceding gene: 116619586

Following gene: 116619590

Centisome position: 5.57

GC content: 59.26

Gene sequence:

>351_bases
ATGTTAGTCCACTGGATCGTGAACTGGCTGCTCGAAGCGCTGGCACTATGGCTGGTGGCGCAGATGATTCCTGGAATGCA
AATCCGCAGCTATGGCACCGCGCTGCTGGCGACGGTGGTGATCGGGCTCGTCGATTTCACGCTCGGTCCCATTCTGCGGT
TCATCGCCTTCCCCATTACGTTTCTGACGCTGGGCCTGTTTCGCCTCGTGATCAATGCCGTGCTGCTCAAACTGGCTTCC
CTCTTCACACCCGGATTCCGCATCGATGGTTTCCTCGCCGCGCTGCTCGGCTCGCTCGTCCTGGCTATCGTCACCGGCCT
TCTCCAAAGTCTGGCCTGGGCCACCATTTAA

Upstream 100 bases:

>100_bases
GCCGGATAGAATCCCGGCTTCCACGCCGTGTATGCAAAGCCGGAGGTTCCGGCGTAGAGCGTCGCCATGGCTTATCATTA
TCTCTGGCTGGAGGCCCCCG

Downstream 100 bases:

>100_bases
CCGTGATCGCTCCTTCGAATTCTTCCGAACTGGCCGACGCCCTCCGCGCAGCGGCATCCGCCGGCCAAACCATCGCGCTC
CACGGGAACTCCTCCAAGCG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MLVHWIVNWLLEALALWLVAQMIPGMQIRSYGTALLATVVIGLVDFTLGPILRFIAFPITFLTLGLFRLVINAVLLKLAS
LFTPGFRIDGFLAALLGSLVLAIVTGLLQSLAWATI

Sequences:

>Translated_116_residues
MLVHWIVNWLLEALALWLVAQMIPGMQIRSYGTALLATVVIGLVDFTLGPILRFIAFPITFLTLGLFRLVINAVLLKLAS
LFTPGFRIDGFLAALLGSLVLAIVTGLLQSLAWATI
>Mature_116_residues
MLVHWIVNWLLEALALWLVAQMIPGMQIRSYGTALLATVVIGLVDFTLGPILRFIAFPITFLTLGLFRLVINAVLLKLAS
LFTPGFRIDGFLAALLGSLVLAIVTGLLQSLAWATI

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007165 [H]

Pfam domain/function: PF04020 DUF360 [H]

EC number: NA

Molecular weight: Translated: 12634; Mature: 12634

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVHWIVNWLLEALALWLVAQMIPGMQIRSYGTALLATVVIGLVDFTLGPILRFIAFPIT
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTLGLFRLVINAVLLKLASLFTPGFRIDGFLAALLGSLVLAIVTGLLQSLAWATI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVHWIVNWLLEALALWLVAQMIPGMQIRSYGTALLATVVIGLVDFTLGPILRFIAFPIT
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTLGLFRLVINAVLLKLASLFTPGFRIDGFLAALLGSLVLAIVTGLLQSLAWATI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]