| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is trxB [H]
Identifier: 116619576
GI number: 116619576
Start: 543150
End: 544823
Strand: Direct
Name: trxB [H]
Synonym: Acid_0437
Alternate gene names: 116619576
Gene position: 543150-544823 (Clockwise)
Preceding gene: 116619572
Following gene: 116619577
Centisome position: 5.45
GC content: 63.92
Gene sequence:
>1674_bases GTGCCGAGTAAACCTGTATTGCTGGCGGTAGATGATGACACCGATGTGCTGCGTTCGGTGGAGAGCGACCTTCGCAAACA CTACGCCAGGAAGTTTCGAATTGTCAGCGCCTCGTCCGGTAAAGCTGCGCTGGATGTGGTGGCCCGCCTGCGCACTCGCA ACGAGGCGATCGCGCTTTTCCTGGTCGATTATCGGATGCCGCAGATGAATGGGATCGAGTTCCTGTCACAGGCTATCGCG CAGAGTCCTGATGCCAAGCGAGTGCTGCTCACGGCCTATGCCGATACCGAGGCCGCGCTCCGCGCGATCAACGAAATTCA TCTTAACCATTACCTGCTGAAACCCTGGAATCCGCCGGACCAGAACCTCTTCCCGGTGCTGGACGATCTGTTGGAGGATT GGATGGCCAATTACCATCCGCCTTTCGAGGGCATCCGCGTGGTCGGTCCGCGATGGTCCCCGCACACCTACGAGCTGCGA GCCTTCCTGGCCAAGAACTCCGTGCCCTACCGCTGGCTCGATGCCGATACCGCGGACCGCGACCCGGAGGTAAAGCGCGC CCTGGATTCCCTACCCGCCGGAACTGCCCTGCCCGTCCTGATCTGCGAGGATGGCACGCAGCTTTCACAGCCCACCCCAG GCGCGGTTGCCGCCCGCATCGGTCTGCGCACCCACTCCGAGACGCCGTTCTACGACCTGGTGATTGTCGGCGGGGGCCCG GCCGGACTGGCTGCCGCGGTCTACGGGGCTTCCGAAGGATTGCGCACTGTAATCATCGAGCGGGACGCCCCCGGCGGACA GGCCGGCCTGAGTTCGCGGATCGAAAATTACCTCGGCTTTCCTTCGGGCCTGAGCGGCGGCGATCTGGCGCGACGAGGTG TCGCGCAGGCGCGCCGCTTTGGCGCCGAAATCCTTTCGCCGCAGCAGGCCGTGGGCATCCGGCAGGAAGGGCCTTATCGC TATATCAAGCTGGCCGATGGCAACGAACTCTCCTGCCACGCGCTCTTGATCGCGACCGGCGTGCAGTGGCGCAAGCTCGA CGTGCCCGGGATGGCGGCGCTGAACGGCGCCGGTGTCTACTACGGCGCTGGCCCCTACGAAGCCAACTCGTGCGATGGAG AAGACGTCTATGTGGTGGGGGGAGCCAACTCCGCCGGGCAGGCGGCCATCAACTTTGCCCGCCACGCGCGCCGCGTGATC ATGCTGATTCGCGGCCAGAGCTTGAATGCCACCATGTCGCAATATTTGATCGACGAGATTTCGCATACCCCGAACATCGA AGTGCACGTGCAGTCGCGTGTGGTGGAAGTCCAGGGCAAGGAGCGCCTGGAATCCATCTCGATCGCCTGCCTCGGCGGCG AGGTGCAGAACGTTGCGGCCAGCGCCCTCTACATCTTCATTGGCGCCGAGCCCAGCACCGAGTGGCTGGCGGGCTTTGTG GAGCGCGATGAACGCGGATACCTGATTACCGGAAGCGACCTGATGCACAATGGCAAGCGGCCGTCCGGCTGGACGCTCGA CCGCGATCCCGGCCTGCTCGAAACCAGCGTGCCCGGCGTCTTCGCGGTCGGCGATGTGCGCGCCGGGTCGGTCAAGCGTG TTGCCTCCGGCGTGGGAGAGGGTTCTATCGCCATTCAATTCGTTCACCAGTACCTGGCGAAGGTGGCGGCATGA
Upstream 100 bases:
>100_bases ATCATACCGAGCAGGAACTTCATGCCTGCATCGTATCGCGCGAAACTTCATCAGTAATAGGACTTGGAGTACATTCAGCA TAAACGTCCTTGGAGGGTAG
Downstream 100 bases:
>100_bases GCGACCTCGCCGCGGAATTGCGCGCCATCCCCGCTTTCTCGGAGCTCACCGGCGACGCGATCGATTGGCTCGCCGCCCAC ATGGAGACCCTCTCCTTCGC
Product: response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MPSKPVLLAVDDDTDVLRSVESDLRKHYARKFRIVSASSGKAALDVVARLRTRNEAIALFLVDYRMPQMNGIEFLSQAIA QSPDAKRVLLTAYADTEAALRAINEIHLNHYLLKPWNPPDQNLFPVLDDLLEDWMANYHPPFEGIRVVGPRWSPHTYELR AFLAKNSVPYRWLDADTADRDPEVKRALDSLPAGTALPVLICEDGTQLSQPTPGAVAARIGLRTHSETPFYDLVIVGGGP AGLAAAVYGASEGLRTVIIERDAPGGQAGLSSRIENYLGFPSGLSGGDLARRGVAQARRFGAEILSPQQAVGIRQEGPYR YIKLADGNELSCHALLIATGVQWRKLDVPGMAALNGAGVYYGAGPYEANSCDGEDVYVVGGANSAGQAAINFARHARRVI MLIRGQSLNATMSQYLIDEISHTPNIEVHVQSRVVEVQGKERLESISIACLGGEVQNVAASALYIFIGAEPSTEWLAGFV ERDERGYLITGSDLMHNGKRPSGWTLDRDPGLLETSVPGVFAVGDVRAGSVKRVASGVGEGSIAIQFVHQYLAKVAA
Sequences:
>Translated_557_residues MPSKPVLLAVDDDTDVLRSVESDLRKHYARKFRIVSASSGKAALDVVARLRTRNEAIALFLVDYRMPQMNGIEFLSQAIA QSPDAKRVLLTAYADTEAALRAINEIHLNHYLLKPWNPPDQNLFPVLDDLLEDWMANYHPPFEGIRVVGPRWSPHTYELR AFLAKNSVPYRWLDADTADRDPEVKRALDSLPAGTALPVLICEDGTQLSQPTPGAVAARIGLRTHSETPFYDLVIVGGGP AGLAAAVYGASEGLRTVIIERDAPGGQAGLSSRIENYLGFPSGLSGGDLARRGVAQARRFGAEILSPQQAVGIRQEGPYR YIKLADGNELSCHALLIATGVQWRKLDVPGMAALNGAGVYYGAGPYEANSCDGEDVYVVGGANSAGQAAINFARHARRVI MLIRGQSLNATMSQYLIDEISHTPNIEVHVQSRVVEVQGKERLESISIACLGGEVQNVAASALYIFIGAEPSTEWLAGFV ERDERGYLITGSDLMHNGKRPSGWTLDRDPGLLETSVPGVFAVGDVRAGSVKRVASGVGEGSIAIQFVHQYLAKVAA >Mature_556_residues PSKPVLLAVDDDTDVLRSVESDLRKHYARKFRIVSASSGKAALDVVARLRTRNEAIALFLVDYRMPQMNGIEFLSQAIAQ SPDAKRVLLTAYADTEAALRAINEIHLNHYLLKPWNPPDQNLFPVLDDLLEDWMANYHPPFEGIRVVGPRWSPHTYELRA FLAKNSVPYRWLDADTADRDPEVKRALDSLPAGTALPVLICEDGTQLSQPTPGAVAARIGLRTHSETPFYDLVIVGGGPA GLAAAVYGASEGLRTVIIERDAPGGQAGLSSRIENYLGFPSGLSGGDLARRGVAQARRFGAEILSPQQAVGIRQEGPYRY IKLADGNELSCHALLIATGVQWRKLDVPGMAALNGAGVYYGAGPYEANSCDGEDVYVVGGANSAGQAAINFARHARRVIM LIRGQSLNATMSQYLIDEISHTPNIEVHVQSRVVEVQGKERLESISIACLGGEVQNVAASALYIFIGAEPSTEWLAGFVE RDERGYLITGSDLMHNGKRPSGWTLDRDPGLLETSVPGVFAVGDVRAGSVKRVASGVGEGSIAIQFVHQYLAKVAA
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=342, Percent_Identity=30.1169590643275, Blast_Score=118, Evalue=8e-28, Organism=Escherichia coli, GI87081763, Length=341, Percent_Identity=30.791788856305, Blast_Score=113, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6320560, Length=339, Percent_Identity=27.7286135693215, Blast_Score=120, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6321898, Length=339, Percent_Identity=27.7286135693215, Blast_Score=119, Evalue=1e-27,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 60129; Mature: 59998
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKPVLLAVDDDTDVLRSVESDLRKHYARKFRIVSASSGKAALDVVARLRTRNEAIALF CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEEEE LVDYRMPQMNGIEFLSQAIAQSPDAKRVLLTAYADTEAALRAINEIHLNHYLLKPWNPPD EEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCEEEECCCCCCC QNLFPVLDDLLEDWMANYHPPFEGIRVVGPRWSPHTYELRAFLAKNSVPYRWLDADTADR CCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCC DPEVKRALDSLPAGTALPVLICEDGTQLSQPTPGAVAARIGLRTHSETPFYDLVIVGGGP CHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHEEEEECEECCCCCEEEEEEECCCC AGLAAAVYGASEGLRTVIIERDAPGGQAGLSSRIENYLGFPSGLSGGDLARRGVAQARRF HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GAEILSPQQAVGIRQEGPYRYIKLADGNELSCHALLIATGVQWRKLDVPGMAALNGAGVY HHHHCCCHHHCCCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEECCCCCEEECCCEEE YGAGPYEANSCDGEDVYVVGGANSAGQAAINFARHARRVIMLIRGQSLNATMSQYLIDEI ECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHH SHTPNIEVHVQSRVVEVQGKERLESISIACLGGEVQNVAASALYIFIGAEPSTEWLAGFV CCCCCEEEEEEEEEEEECCHHHHHHEEEEEECCHHHHHEEEEEEEEEECCCCHHHHHHHH ERDERGYLITGSDLMHNGKRPSGWTLDRDPGLLETSVPGVFAVGDVRAGSVKRVASGVGE HCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCHHHHHHCCCC GSIAIQFVHQYLAKVAA CHHHHHHHHHHHHHHCC >Mature Secondary Structure PSKPVLLAVDDDTDVLRSVESDLRKHYARKFRIVSASSGKAALDVVARLRTRNEAIALF CCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEEEE LVDYRMPQMNGIEFLSQAIAQSPDAKRVLLTAYADTEAALRAINEIHLNHYLLKPWNPPD EEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCEEEECCCCCCC QNLFPVLDDLLEDWMANYHPPFEGIRVVGPRWSPHTYELRAFLAKNSVPYRWLDADTADR CCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCC DPEVKRALDSLPAGTALPVLICEDGTQLSQPTPGAVAARIGLRTHSETPFYDLVIVGGGP CHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHEEEEECEECCCCCEEEEEEECCCC AGLAAAVYGASEGLRTVIIERDAPGGQAGLSSRIENYLGFPSGLSGGDLARRGVAQARRF HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GAEILSPQQAVGIRQEGPYRYIKLADGNELSCHALLIATGVQWRKLDVPGMAALNGAGVY HHHHCCCHHHCCCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEECCCCCEEECCCEEE YGAGPYEANSCDGEDVYVVGGANSAGQAAINFARHARRVIMLIRGQSLNATMSQYLIDEI ECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHH SHTPNIEVHVQSRVVEVQGKERLESISIACLGGEVQNVAASALYIFIGAEPSTEWLAGFV CCCCCEEEEEEEEEEEECCHHHHHHEEEEEECCHHHHHEEEEEEEEEECCCCHHHHHHHH ERDERGYLITGSDLMHNGKRPSGWTLDRDPGLLETSVPGVFAVGDVRAGSVKRVASGVGE HCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCHHHHHHCCCC GSIAIQFVHQYLAKVAA CHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA