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The map label for this gene is 116619554

Identifier: 116619554

GI number: 116619554

Start: 517587

End: 518903

Strand: Direct

Name: 116619554

Synonym: Acid_0415

Alternate gene names: NA

Gene position: 517587-518903 (Clockwise)

Preceding gene: 116619552

Following gene: 116619556

Centisome position: 5.19

GC content: 64.69

Gene sequence:

>1317_bases
GTGCGCACCCACGACTCCGAAAAATTCTTGGAGAGCTTCTACTTCCAGTACGGCCACGCCTCCATCGCCGACCTCGGCCA
CACCGTGATGTGCTTCGAAGGGATCAGCGAGCTCGCCGCCACCGAGATCGAAGAGGAGCCGCTGTGGGACGGTCAGGCGA
AGTCCTCGCGATACCAGGATTTTTCGTGCTCCGGATTCATCACGCCGCCCGAGTTCGGCGCGGCGGACGCCGTGTCCTAT
CAAGCCGCCGCGCAGGCGCTCCTCGCCGCATATGGGCAGGTCAAAGAACTGGCATTCGCCGCGTTGACCTCGCGCCTGCC
GCGTCCCGACGACATGAAGCCGGAAGCCTATCAACGCAACCTGGCTGCCCGCGCGTTCGACGTGGCGCGCTATCTGCTGT
TCTGGGGCGTCCCGACCAACGTGGGCCAAGTGGCCAGTATCCGCACGGTCGAAAAGCAGATTCGCCGCCTCAAGTCCTCG
GAGTACGAGGAACTACGGAGTTTGGGCGATGAGATTGCGCAATCGTGTGCTGCCCTGCCCGATTGCGTCTGGGACCCGGC
CGCCAAAGCCGAGGCTCTGGCTCCAACGCTGGCGCGTCACGCCGATCCCGACGAGCATGCCATGCGGTCGCGTGATGATC
TCCGCGCTTGGGCCGCGCAGAACCTGCCGGCCCGCGCCGGCGGCGATTGCGATCGCGTCGATTTGATCCGGCCCACGAAC
GTGCCCGCCGATATCGCGGCAACGCTGCTCTACCCGGTGACAGCCCGCCCCTTCCGCGAACTCTACGAACTGGCCTGCTC
ATGGAGCGACCGGCAGCGCGCTGAGGTCATCGACGTGGCGCTGCGCAGCCGTACGCGGCGCGACGAAATTCTCGCCGGAT
TCCGCGGAGGCCTCTACGCGTACGACATCACCATGGACATCGGCGCGTATCGCGATTTGCACCGTCACCGGCGCTGCCAG
AAGTTCCGCCAGGCCTACAGCGGCAATCTCGGCTTCGATACCCCCGCGCTGGTGACTGAGTCGGGCGCAGGTGCGCTGTA
CGAGGAGGCGATGCAGGCTGCTCTGGCCGCAATGCGCCGCCTGCCCGCGCCCGCCAATGAATACCTGTTGCCCTTCGGCG
CCCGGTCACGCTTCCTGTTCAAGATGGATTTTGCCGAAGCGGAATACATTTCCCGTCTGCGCAGCGGCGTCAAAGGCCAC
TTCAGCTACCGGGAAATCGCCTGGGAAATGAAAGTCAAGATGGAGCAACTCGAGCCCGAACTCGGGCGCCTGATCCAGGC
CACGCCTCCTTGGATTGAAGACCCGCTGAAGCGGTAG

Upstream 100 bases:

>100_bases
ACGTGTGATCACTGTGGCGCCGATGCCGCCCGAAAAGAGCGCCTATGCCCTGGCGCGATACAGCCGGTCGCCGGATTCCA
TTCGAGATTCGATCGAGTGG

Downstream 100 bases:

>100_bases
CACTAGCTAGCGATCAGGCGATGAAGGTCTCGAGCCACAAACCGCACACTGCTCGCAGGCCGCCAAGATGCTTTCTCGCA
GAGGCCGCAGAGATCGCAGA

Product: alternative thymidylate synthase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MRTHDSEKFLESFYFQYGHASIADLGHTVMCFEGISELAATEIEEEPLWDGQAKSSRYQDFSCSGFITPPEFGAADAVSY
QAAAQALLAAYGQVKELAFAALTSRLPRPDDMKPEAYQRNLAARAFDVARYLLFWGVPTNVGQVASIRTVEKQIRRLKSS
EYEELRSLGDEIAQSCAALPDCVWDPAAKAEALAPTLARHADPDEHAMRSRDDLRAWAAQNLPARAGGDCDRVDLIRPTN
VPADIAATLLYPVTARPFRELYELACSWSDRQRAEVIDVALRSRTRRDEILAGFRGGLYAYDITMDIGAYRDLHRHRRCQ
KFRQAYSGNLGFDTPALVTESGAGALYEEAMQAALAAMRRLPAPANEYLLPFGARSRFLFKMDFAEAEYISRLRSGVKGH
FSYREIAWEMKVKMEQLEPELGRLIQATPPWIEDPLKR

Sequences:

>Translated_438_residues
MRTHDSEKFLESFYFQYGHASIADLGHTVMCFEGISELAATEIEEEPLWDGQAKSSRYQDFSCSGFITPPEFGAADAVSY
QAAAQALLAAYGQVKELAFAALTSRLPRPDDMKPEAYQRNLAARAFDVARYLLFWGVPTNVGQVASIRTVEKQIRRLKSS
EYEELRSLGDEIAQSCAALPDCVWDPAAKAEALAPTLARHADPDEHAMRSRDDLRAWAAQNLPARAGGDCDRVDLIRPTN
VPADIAATLLYPVTARPFRELYELACSWSDRQRAEVIDVALRSRTRRDEILAGFRGGLYAYDITMDIGAYRDLHRHRRCQ
KFRQAYSGNLGFDTPALVTESGAGALYEEAMQAALAAMRRLPAPANEYLLPFGARSRFLFKMDFAEAEYISRLRSGVKGH
FSYREIAWEMKVKMEQLEPELGRLIQATPPWIEDPLKR
>Mature_438_residues
MRTHDSEKFLESFYFQYGHASIADLGHTVMCFEGISELAATEIEEEPLWDGQAKSSRYQDFSCSGFITPPEFGAADAVSY
QAAAQALLAAYGQVKELAFAALTSRLPRPDDMKPEAYQRNLAARAFDVARYLLFWGVPTNVGQVASIRTVEKQIRRLKSS
EYEELRSLGDEIAQSCAALPDCVWDPAAKAEALAPTLARHADPDEHAMRSRDDLRAWAAQNLPARAGGDCDRVDLIRPTN
VPADIAATLLYPVTARPFRELYELACSWSDRQRAEVIDVALRSRTRRDEILAGFRGGLYAYDITMDIGAYRDLHRHRRCQ
KFRQAYSGNLGFDTPALVTESGAGALYEEAMQAALAAMRRLPAPANEYLLPFGARSRFLFKMDFAEAEYISRLRSGVKGH
FSYREIAWEMKVKMEQLEPELGRLIQATPPWIEDPLKR

Specific function: Unknown

COG id: COG1351

COG function: function code F; Predicted alternative thymidylate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 thyX (flavin-dependent thymidylate synthase) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003669 [H]

Pfam domain/function: PF02511 Thy1 [H]

EC number: NA

Molecular weight: Translated: 49208; Mature: 49208

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTHDSEKFLESFYFQYGHASIADLGHTVMCFEGISELAATEIEEEPLWDGQAKSSRYQD
CCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FSCSGFITPPEFGAADAVSYQAAAQALLAAYGQVKELAFAALTSRLPRPDDMKPEAYQRN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LAARAFDVARYLLFWGVPTNVGQVASIRTVEKQIRRLKSSEYEELRSLGDEIAQSCAALP
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
DCVWDPAAKAEALAPTLARHADPDEHAMRSRDDLRAWAAQNLPARAGGDCDRVDLIRPTN
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCC
VPADIAATLLYPVTARPFRELYELACSWSDRQRAEVIDVALRSRTRRDEILAGFRGGLYA
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
YDITMDIGAYRDLHRHRRCQKFRQAYSGNLGFDTPALVTESGAGALYEEAMQAALAAMRR
EEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH
LPAPANEYLLPFGARSRFLFKMDFAEAEYISRLRSGVKGHFSYREIAWEMKVKMEQLEPE
CCCCCCCCEECCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHH
LGRLIQATPPWIEDPLKR
HHHHHCCCCCHHHHHCCC
>Mature Secondary Structure
MRTHDSEKFLESFYFQYGHASIADLGHTVMCFEGISELAATEIEEEPLWDGQAKSSRYQD
CCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FSCSGFITPPEFGAADAVSYQAAAQALLAAYGQVKELAFAALTSRLPRPDDMKPEAYQRN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LAARAFDVARYLLFWGVPTNVGQVASIRTVEKQIRRLKSSEYEELRSLGDEIAQSCAALP
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
DCVWDPAAKAEALAPTLARHADPDEHAMRSRDDLRAWAAQNLPARAGGDCDRVDLIRPTN
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCC
VPADIAATLLYPVTARPFRELYELACSWSDRQRAEVIDVALRSRTRRDEILAGFRGGLYA
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
YDITMDIGAYRDLHRHRRCQKFRQAYSGNLGFDTPALVTESGAGALYEEAMQAALAAMRR
EEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH
LPAPANEYLLPFGARSRFLFKMDFAEAEYISRLRSGVKGHFSYREIAWEMKVKMEQLEPE
CCCCCCCCEECCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHH
LGRLIQATPPWIEDPLKR
HHHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]