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The map label for this gene is pduA [H]

Identifier: 116619522

GI number: 116619522

Start: 482025

End: 482306

Strand: Direct

Name: pduA [H]

Synonym: Acid_0381

Alternate gene names: 116619522

Gene position: 482025-482306 (Clockwise)

Preceding gene: 116619515

Following gene: 116619523

Centisome position: 4.84

GC content: 63.12

Gene sequence:

>282_bases
ATGGAAGCCCTCGGAATGATCGAAACAAAGGGGTTAACCGGCGCTATCGAAGCCGCCGACGCCATGGTCAAGACCGCCAA
CGTGGTCCTGATCGGCAAGGAATTTGTCGGCGCGGGACTGGTGATGGTGCAGGTGCGCGGCGATGTCGGCGCGGTAAAAG
CTGCAACCGATGCAGGCGCCGCGGCTGCCCGCCGTGTCGGGGAACTGGTCAGCGTCCACGTGATCCCGCGGCCGCACGAA
GAGGTCGAGAAAATTCTCCCGGCCGGCGGCAACAAGAAGTAA

Upstream 100 bases:

>100_bases
GGCACCACAGAACATAGAGCAAGCTTAGTTCCAGACCGCAGTTCGACCCGCCAGCGTCGAATTGTGGTACGGTAAGTCTT
TCACCCATATTGGAGAACAA

Downstream 100 bases:

>100_bases
GGACCGATGCTCGAGGATAAGGACCTCCTGTCCATCCAGGAGGTACGCAGCAAAGTCGAGAAGGCGTTCGCCGCCTGGCA
GAAATACAAGTCGTTCTCAC

Product: microcompartments protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MEALGMIETKGLTGAIEAADAMVKTANVVLIGKEFVGAGLVMVQVRGDVGAVKAATDAGAAAARRVGELVSVHVIPRPHE
EVEKILPAGGNKK

Sequences:

>Translated_93_residues
MEALGMIETKGLTGAIEAADAMVKTANVVLIGKEFVGAGLVMVQVRGDVGAVKAATDAGAAAARRVGELVSVHVIPRPHE
EVEKILPAGGNKK
>Mature_93_residues
MEALGMIETKGLTGAIEAADAMVKTANVVLIGKEFVGAGLVMVQVRGDVGAVKAATDAGAAAARRVGELVSVHVIPRPHE
EVEKILPAGGNKK

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=89, Percent_Identity=67.4157303370787, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9458; Mature: 9458

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALGMIETKGLTGAIEAADAMVKTANVVLIGKEFVGAGLVMVQVRGDVGAVKAATDAGA
CCCCCCEECCCCCCHHHHHHHHHEECCEEEECCCCCCCCEEEEEECCCCCEEEECCCCCH
AAARRVGELVSVHVIPRPHEEVEKILPAGGNKK
HHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEALGMIETKGLTGAIEAADAMVKTANVVLIGKEFVGAGLVMVQVRGDVGAVKAATDAGA
CCCCCCEECCCCCCHHHHHHHHHEECCEEEECCCCCCCCEEEEEECCCCCEEEECCCCCH
AAARRVGELVSVHVIPRPHEEVEKILPAGGNKK
HHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]