| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619515
Identifier: 116619515
GI number: 116619515
Start: 474352
End: 474777
Strand: Direct
Name: 116619515
Synonym: Acid_0374
Alternate gene names: NA
Gene position: 474352-474777 (Clockwise)
Preceding gene: 116619514
Following gene: 116619522
Centisome position: 4.76
GC content: 61.03
Gene sequence:
>426_bases TTGAGCGGTCCGTTTGTTCTGGATGCGTCCCTAACCTTGAGTTGGGCCTTCGACGACGAAGCCGCTCCCTTTGCCGTACA CATCCTCAGGTCGCTTGAAACTGTCCATGCAGTAGCGCCCGCACTGTGGCCCTTTGAAGTGGCGAGTGTGCTGGCGGTCG CTGAGCGAAGAGGCCGCATCAACACCGGACAGCAGGCTGAATTCCTGGAACGACTGCGAATGCTGCCGATCCTGATTGAA AACCGCCCGGCTGCGTGGCTCGCGCAGCAGATCCTTCCGCTGGCGCGGCGATACCGACTGAGCGGATATGATGCCGCCTA CCTCGAGTTAGCCATCAGAGAAGCACTGCCCCTGGCAACGCTCGACGGAGATTTGCGGGTTGCCGCAATAGAGGCGGGCG TGCCGCTAATCGACGCGCAGCTGTAG
Upstream 100 bases:
>100_bases GTGAAGCGGTCGCCGCGATGCTCGCGTTCCGCGAGACACATCATCTCACGTTAGAGCCAGGCGTGCGCATCCAGGATCTC CTTCATGAGGGACACAAGTA
Downstream 100 bases:
>100_bases GCTTGCTAGAAGCCTTCCCCAGACGTAGGCGCTGAACTGGCGGATGGTTTCGAAGCCGAGGGCGAGCTGTGCTTGAGCCC GGTGGGTTTGAGCGCGATGA
Product: PilT domain-containing protein
Products: NA
Alternate protein names: PilT Protein Domain Protein; Xin Of Toxin-Antitoxin System; PilT Protein; Xin Of Toxin-Antitoxin; PilT Protein N-Terminal
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSGPFVLDASLTLSWAFDDEAAPFAVHILRSLETVHAVAPALWPFEVASVLAVAERRGRINTGQQAEFLERLRMLPILIE NRPAAWLAQQILPLARRYRLSGYDAAYLELAIREALPLATLDGDLRVAAIEAGVPLIDAQL
Sequences:
>Translated_141_residues MSGPFVLDASLTLSWAFDDEAAPFAVHILRSLETVHAVAPALWPFEVASVLAVAERRGRINTGQQAEFLERLRMLPILIE NRPAAWLAQQILPLARRYRLSGYDAAYLELAIREALPLATLDGDLRVAAIEAGVPLIDAQL >Mature_140_residues SGPFVLDASLTLSWAFDDEAAPFAVHILRSLETVHAVAPALWPFEVASVLAVAERRGRINTGQQAEFLERLRMLPILIEN RPAAWLAQQILPLARRYRLSGYDAAYLELAIREALPLATLDGDLRVAAIEAGVPLIDAQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15499; Mature: 15368
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPFVLDASLTLSWAFDDEAAPFAVHILRSLETVHAVAPALWPFEVASVLAVAERRGRI CCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC NTGQQAEFLERLRMLPILIENRPAAWLAQQILPLARRYRLSGYDAAYLELAIREALPLAT CCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEE LDGDLRVAAIEAGVPLIDAQL ECCCEEEEEEECCCCEECCCC >Mature Secondary Structure SGPFVLDASLTLSWAFDDEAAPFAVHILRSLETVHAVAPALWPFEVASVLAVAERRGRI CCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC NTGQQAEFLERLRMLPILIENRPAAWLAQQILPLARRYRLSGYDAAYLELAIREALPLAT CCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEE LDGDLRVAAIEAGVPLIDAQL ECCCEEEEEEECCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA