| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is cenC [H]
Identifier: 116619341
GI number: 116619341
Start: 255603
End: 258401
Strand: Direct
Name: cenC [H]
Synonym: Acid_0198
Alternate gene names: 116619341
Gene position: 255603-258401 (Clockwise)
Preceding gene: 116619340
Following gene: 116619342
Centisome position: 2.56
GC content: 62.31
Gene sequence:
>2799_bases ATGCAAACCAGGACCGTGTTCCTTACCCTCGTCACGGTGCTTTCCGCGGCGCAGGCTCCCCCCCGGATGCCCATCCCCAA CAACTACCAGGATTCGATTCTCACCAGGTGGCTCGCCAAGCCGGTGCTGGAATCGAAGCTTCTGGATGACGCGGAATCGC TCGATACCTGGAAGCTGGTCAACGTCGATCAGGCCAAGGGCCAGATGACCCTCACCACGGAGCGGAAAGTCAGCGGCGCC GCCGCGTTGCGATTGCGCTGCCCGATGGTCGGTGATGCTCCCGCCGCCGGCCGCTACTATGGCACCGCATCGGCCCGTCG CGTGGTCGCCGCGGAGGATTGGTCGCCATGGAACCGGCTCTCCTTCTGGGTCTATCCCGATCTTCCCGGAGTGCGCGTGA TCTCCCTTATCGTCACCTTCCGCAACGAGGGTAAGGAACCGGTGCCCGATAGCTACGGCAAGATGGGCGTCAACCACGTC ATCCTCAAGAATCACGAGTGGAACCACATCGTCTGGGAAATCGCCAATCTTCCGCGCGATAAAGTGACGGGACTCGATTT CTCCTACCGCATGCAGGGCCACGAACCCGGCGCGGGCGACATCGCCACCTTCGACATCGACAAGCTGGAGCTCCAGCAGG TGAATGCCGATCACTACGAAGGTTGGGATGTGGCGCCCGGAGCGATCTCGTTCAGCCACTCGGGCTACCAGACCGGTTCG CCCAAATCCGCCATCGCGAGCGACCTGCGTGCCGCCCAGTTCGAGTTAGTCGATACGCGCACCGGCCGCGCCGTGCTTTC GAAAAAAGTCGCGGAAGTGACTTCGCAGATCGGCCGGTTTCAGGTCATGGATTTCTCCGAGGTGCGCGACCCGGGAACCT ATTTCGTGCGCGCGGGCAATCGCTCTACACGGCCCTTTCCCATCGGCGACGATGTCTGGAAGTCCAGCCTGTGGAAAGCC ATCAACTTCTTCTACGTGGAGCGCTGCGGCTACGCGATCCCCGGCGTACACGATGCCTGCCACCGCGATTGGATGCTCAA GCACGGCGAGAAGCAACTGGTGGTGAATGGCGGCTGGCACGATGCCGGAGATCTTTCGCAATCCCTCAGCAATACCGCCG AGGCGGCATACTCCATGTTCAGTCTCGCGGAGCGGATGCAGGCCGCTCACGAAGATCCCGAGCTGCTCAACCGTCTGCTT GAGGAAGCAAAGTGGGGACTCCACTGGCTGCTGAAGGTGACCTTTCACGACGGCTTCCGTCCCGGCTTTTCGCAGATGGA TCGCTGGACCGACGGCGTGATCGGCAACCTCGACGACGTCTCCGCGCGCGCCACCAACAATCCCGCACAGAATCTGGCAG CTGCCGCCACCGAGGCCCTCGCGGCCCGCGTACTGAAACAATCCGATCCCATTCTGGCGGGTTACAGCCTGAAGCAGGCG CAGGAGGATTGGGACTTCGCCATCGCGGGAATGGCCGGCGGAACCCGCGGCGGTGTCACCGAAATCTCCGGCCACGCCAT CATCGCGGGCCTGGAGCTCTGGCAGGCAACGGGAGATCGCAAGTATGCCGACCGGGCCATTGCGCTTTCCAAGAACATCA CCGGCTCGCAGCAGCGCGATTTTCTCCCCGGCCTGACTACTCCTCTCACCGGGTTCTTCTACACGGCGCCCGATAAGACT CGCATCCTGCGCTATCAGCACCTCAGCCACGAGGAAGCGCCCACGGTCGCGCTGGTCCGCTTGTGCGAATTGTTCCCCGA CGACCCGAACTGGATGACCTGGTACTCCGCTGTCGCTCTCTACACCGAATATTTCCAGAAGCCCATGGCCCGTTTCACAG AGCCCTACGGCATGTTGGCGAATTCCATTTACAAAGACGATGAATACCTGCAGCAGCCCGAGGGAGGCCGTGGCTCCACG CGCGACGCCTTCCGCGAACAGGTGCTCAACGGCATCAAAGTGGGCGAGCACCACTACGTCCGTCTCTTCCCGGTGTGGTT CGAATTCCGCGGCAACAACGGCACCATGCTGGCGGAGAACAAGGCCATCGCCGCGGCTGCCCACCTGCGTGGCAACCTGG AACTGGCCAACCTCGCGGAGAAGAATATGGAATGGGTCGTGGGGCGCAATCCGTTCGTGCAGAGCTTGATGTGGGGCGAA GGCTACGACTACGCGCCACAATACAGCGCCATGTCGGGCGATATTGTCGGTTCACTGCCGGTCGGCATCCAGGCGCACCG CAACGCCGACGCGCCTTACTGGCCCACAGAGAATTGCCACAACTGGAAGGAGGTCTGGGTGCACCCCGTAGGTCGATGGA TCTGGCTGATGCGCGACCTGGCAGGTCCGGCAATGCTGGAGGGCAATTCCGGGACTCCGGTACAACTTCGAGACATCAGC ACCGGCCGGATTTCGAACATTGCCGCCGGCCGCTTGCACACCGCCGTGCCGCAGGGTGAGTACGAGCTGACCGCCGGATC ACTCAAGCGGCGGATCACTATGCTGCCAGGCCAGAGTTATCCGGTGAACTTCGACGATATAGAGTTCACCTTTTCCGGCG AGAAGAATGCGTCTGGTGTCGTAACCATGCATGCCGTCGTGACGGGCACCGGACGCCACACCATCGCACTACGGACTGAC AACCTGCCGGTCGAACCCGCGGCACGGGACGTTGACCTCGAACCAGGTGTGCCGCAGGCCATCGAGTGGCGGGCCCGCCC GTCGTCTGAAGCGCCGTGGATTGCAGTGGCTATCCCCGACCACCAAATCTCGCGCCGGAAAGAAGCAACCGGCCGGTAG
Upstream 100 bases:
>100_bases GCTGGTCGCGTAAGAATATGCAGATCGTGCTCTCTGCTAAGGTTATGTCCGGGACTGCGGGACCTCCGCAGATTCTCAAA GTCCACTTCTGGTAGCTTAG
Downstream 100 bases:
>100_bases AATCGAAGGACATGAGCGATCAGCAGATTTGGCGTAACCCGGTACGCGAGCGGCTGGAGGCCGGACAACCTGCATTCGGC GTGACCATCACGACGGCTTC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Cellulase C; Endo-1,4-beta-glucanase C [H]
Number of amino acids: Translated: 932; Mature: 932
Protein sequence:
>932_residues MQTRTVFLTLVTVLSAAQAPPRMPIPNNYQDSILTRWLAKPVLESKLLDDAESLDTWKLVNVDQAKGQMTLTTERKVSGA AALRLRCPMVGDAPAAGRYYGTASARRVVAAEDWSPWNRLSFWVYPDLPGVRVISLIVTFRNEGKEPVPDSYGKMGVNHV ILKNHEWNHIVWEIANLPRDKVTGLDFSYRMQGHEPGAGDIATFDIDKLELQQVNADHYEGWDVAPGAISFSHSGYQTGS PKSAIASDLRAAQFELVDTRTGRAVLSKKVAEVTSQIGRFQVMDFSEVRDPGTYFVRAGNRSTRPFPIGDDVWKSSLWKA INFFYVERCGYAIPGVHDACHRDWMLKHGEKQLVVNGGWHDAGDLSQSLSNTAEAAYSMFSLAERMQAAHEDPELLNRLL EEAKWGLHWLLKVTFHDGFRPGFSQMDRWTDGVIGNLDDVSARATNNPAQNLAAAATEALAARVLKQSDPILAGYSLKQA QEDWDFAIAGMAGGTRGGVTEISGHAIIAGLELWQATGDRKYADRAIALSKNITGSQQRDFLPGLTTPLTGFFYTAPDKT RILRYQHLSHEEAPTVALVRLCELFPDDPNWMTWYSAVALYTEYFQKPMARFTEPYGMLANSIYKDDEYLQQPEGGRGST RDAFREQVLNGIKVGEHHYVRLFPVWFEFRGNNGTMLAENKAIAAAAHLRGNLELANLAEKNMEWVVGRNPFVQSLMWGE GYDYAPQYSAMSGDIVGSLPVGIQAHRNADAPYWPTENCHNWKEVWVHPVGRWIWLMRDLAGPAMLEGNSGTPVQLRDIS TGRISNIAAGRLHTAVPQGEYELTAGSLKRRITMLPGQSYPVNFDDIEFTFSGEKNASGVVTMHAVVTGTGRHTIALRTD NLPVEPAARDVDLEPGVPQAIEWRARPSSEAPWIAVAIPDHQISRRKEATGR
Sequences:
>Translated_932_residues MQTRTVFLTLVTVLSAAQAPPRMPIPNNYQDSILTRWLAKPVLESKLLDDAESLDTWKLVNVDQAKGQMTLTTERKVSGA AALRLRCPMVGDAPAAGRYYGTASARRVVAAEDWSPWNRLSFWVYPDLPGVRVISLIVTFRNEGKEPVPDSYGKMGVNHV ILKNHEWNHIVWEIANLPRDKVTGLDFSYRMQGHEPGAGDIATFDIDKLELQQVNADHYEGWDVAPGAISFSHSGYQTGS PKSAIASDLRAAQFELVDTRTGRAVLSKKVAEVTSQIGRFQVMDFSEVRDPGTYFVRAGNRSTRPFPIGDDVWKSSLWKA INFFYVERCGYAIPGVHDACHRDWMLKHGEKQLVVNGGWHDAGDLSQSLSNTAEAAYSMFSLAERMQAAHEDPELLNRLL EEAKWGLHWLLKVTFHDGFRPGFSQMDRWTDGVIGNLDDVSARATNNPAQNLAAAATEALAARVLKQSDPILAGYSLKQA QEDWDFAIAGMAGGTRGGVTEISGHAIIAGLELWQATGDRKYADRAIALSKNITGSQQRDFLPGLTTPLTGFFYTAPDKT RILRYQHLSHEEAPTVALVRLCELFPDDPNWMTWYSAVALYTEYFQKPMARFTEPYGMLANSIYKDDEYLQQPEGGRGST RDAFREQVLNGIKVGEHHYVRLFPVWFEFRGNNGTMLAENKAIAAAAHLRGNLELANLAEKNMEWVVGRNPFVQSLMWGE GYDYAPQYSAMSGDIVGSLPVGIQAHRNADAPYWPTENCHNWKEVWVHPVGRWIWLMRDLAGPAMLEGNSGTPVQLRDIS TGRISNIAAGRLHTAVPQGEYELTAGSLKRRITMLPGQSYPVNFDDIEFTFSGEKNASGVVTMHAVVTGTGRHTIALRTD NLPVEPAARDVDLEPGVPQAIEWRARPSSEAPWIAVAIPDHQISRRKEATGR >Mature_932_residues MQTRTVFLTLVTVLSAAQAPPRMPIPNNYQDSILTRWLAKPVLESKLLDDAESLDTWKLVNVDQAKGQMTLTTERKVSGA AALRLRCPMVGDAPAAGRYYGTASARRVVAAEDWSPWNRLSFWVYPDLPGVRVISLIVTFRNEGKEPVPDSYGKMGVNHV ILKNHEWNHIVWEIANLPRDKVTGLDFSYRMQGHEPGAGDIATFDIDKLELQQVNADHYEGWDVAPGAISFSHSGYQTGS PKSAIASDLRAAQFELVDTRTGRAVLSKKVAEVTSQIGRFQVMDFSEVRDPGTYFVRAGNRSTRPFPIGDDVWKSSLWKA INFFYVERCGYAIPGVHDACHRDWMLKHGEKQLVVNGGWHDAGDLSQSLSNTAEAAYSMFSLAERMQAAHEDPELLNRLL EEAKWGLHWLLKVTFHDGFRPGFSQMDRWTDGVIGNLDDVSARATNNPAQNLAAAATEALAARVLKQSDPILAGYSLKQA QEDWDFAIAGMAGGTRGGVTEISGHAIIAGLELWQATGDRKYADRAIALSKNITGSQQRDFLPGLTTPLTGFFYTAPDKT RILRYQHLSHEEAPTVALVRLCELFPDDPNWMTWYSAVALYTEYFQKPMARFTEPYGMLANSIYKDDEYLQQPEGGRGST RDAFREQVLNGIKVGEHHYVRLFPVWFEFRGNNGTMLAENKAIAAAAHLRGNLELANLAEKNMEWVVGRNPFVQSLMWGE GYDYAPQYSAMSGDIVGSLPVGIQAHRNADAPYWPTENCHNWKEVWVHPVGRWIWLMRDLAGPAMLEGNSGTPVQLRDIS TGRISNIAAGRLHTAVPQGEYELTAGSLKRRITMLPGQSYPVNFDDIEFTFSGEKNASGVVTMHAVVTGTGRHTIALRTD NLPVEPAARDVDLEPGVPQAIEWRARPSSEAPWIAVAIPDHQISRRKEATGR
Specific function: The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes:(1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing e
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 Ig-like (immunoglobulin-like) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR003305 - InterPro: IPR008979 - InterPro: IPR001701 - InterPro: IPR018221 - InterPro: IPR004197 - InterPro: IPR007110 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR013098 - InterPro: IPR003599 [H]
Pfam domain/function: PF02018 CBM_4_9; PF02927 CelD_N; PF00759 Glyco_hydro_9; PF07679 I-set [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 103661; Mature: 103661
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTRTVFLTLVTVLSAAQAPPRMPIPNNYQDSILTRWLAKPVLESKLLDDAESLDTWKLV CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEE NVDQAKGQMTLTTERKVSGAAALRLRCPMVGDAPAAGRYYGTASARRVVAAEDWSPWNRL ECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCE SFWVYPDLPGVRVISLIVTFRNEGKEPVPDSYGKMGVNHVILKNHEWNHIVWEIANLPRD EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEECCCCCEEEEEECCCCCC KVTGLDFSYRMQGHEPGAGDIATFDIDKLELQQVNADHYEGWDVAPGAISFSHSGYQTGS CCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC PKSAIASDLRAAQFELVDTRTGRAVLSKKVAEVTSQIGRFQVMDFSEVRDPGTYFVRAGN CHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEHHHCCCCCCEEEECCC RSTRPFPIGDDVWKSSLWKAINFFYVERCGYAIPGVHDACHRDWMLKHGEKQLVVNGGWH CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCC DAGDLSQSLSNTAEAAYSMFSLAERMQAAHEDPELLNRLLEEAKWGLHWLLKVTFHDGFR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCC PGFSQMDRWTDGVIGNLDDVSARATNNPAQNLAAAATEALAARVLKQSDPILAGYSLKQA CCHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH QEDWDFAIAGMAGGTRGGVTEISGHAIIAGLELWQATGDRKYADRAIALSKNITGSQQRD CCCCCEEEEECCCCCCCCCEEECCCEEEEEHHHHHCCCCCHHHHHHEEEECCCCCCCHHC FLPGLTTPLTGFFYTAPDKTRILRYQHLSHEEAPTVALVRLCELFPDDPNWMTWYSAVAL CCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH YTEYFQKPMARFTEPYGMLANSIYKDDEYLQQPEGGRGSTRDAFREQVLNGIKVGEHHYV HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEE RLFPVWFEFRGNNGTMLAENKAIAAAAHLRGNLELANLAEKNMEWVVGRNPFVQSLMWGE EEEEEEEEEECCCCCEEECCCHHEEHHHHCCCCCHHHHHHCCCCEEECCCHHHHHHHCCC GYDYAPQYSAMSGDIVGSLPVGIQAHRNADAPYWPTENCHNWKEVWVHPVGRWIWLMRDL CCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AGPAMLEGNSGTPVQLRDISTGRISNIAAGRLHTAVPQGEYELTAGSLKRRITMLPGQSY CCCEEEECCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCEEEEHHHHHCEEEECCCCCC PVNFDDIEFTFSGEKNASGVVTMHAVVTGTGRHTIALRTDNLPVEPAARDVDLEPGVPQA CCCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHH IEWRARPSSEAPWIAVAIPDHQISRRKEATGR HEECCCCCCCCCEEEEEECCHHHHHHHHCCCC >Mature Secondary Structure MQTRTVFLTLVTVLSAAQAPPRMPIPNNYQDSILTRWLAKPVLESKLLDDAESLDTWKLV CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEE NVDQAKGQMTLTTERKVSGAAALRLRCPMVGDAPAAGRYYGTASARRVVAAEDWSPWNRL ECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCE SFWVYPDLPGVRVISLIVTFRNEGKEPVPDSYGKMGVNHVILKNHEWNHIVWEIANLPRD EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEECCCCCEEEEEECCCCCC KVTGLDFSYRMQGHEPGAGDIATFDIDKLELQQVNADHYEGWDVAPGAISFSHSGYQTGS CCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC PKSAIASDLRAAQFELVDTRTGRAVLSKKVAEVTSQIGRFQVMDFSEVRDPGTYFVRAGN CHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEHHHCCCCCCEEEECCC RSTRPFPIGDDVWKSSLWKAINFFYVERCGYAIPGVHDACHRDWMLKHGEKQLVVNGGWH CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCC DAGDLSQSLSNTAEAAYSMFSLAERMQAAHEDPELLNRLLEEAKWGLHWLLKVTFHDGFR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCC PGFSQMDRWTDGVIGNLDDVSARATNNPAQNLAAAATEALAARVLKQSDPILAGYSLKQA CCHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH QEDWDFAIAGMAGGTRGGVTEISGHAIIAGLELWQATGDRKYADRAIALSKNITGSQQRD CCCCCEEEEECCCCCCCCCEEECCCEEEEEHHHHHCCCCCHHHHHHEEEECCCCCCCHHC FLPGLTTPLTGFFYTAPDKTRILRYQHLSHEEAPTVALVRLCELFPDDPNWMTWYSAVAL CCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH YTEYFQKPMARFTEPYGMLANSIYKDDEYLQQPEGGRGSTRDAFREQVLNGIKVGEHHYV HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEE RLFPVWFEFRGNNGTMLAENKAIAAAAHLRGNLELANLAEKNMEWVVGRNPFVQSLMWGE EEEEEEEEEECCCCCEEECCCHHEEHHHHCCCCCHHHHHHCCCCEEECCCHHHHHHHCCC GYDYAPQYSAMSGDIVGSLPVGIQAHRNADAPYWPTENCHNWKEVWVHPVGRWIWLMRDL CCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AGPAMLEGNSGTPVQLRDISTGRISNIAAGRLHTAVPQGEYELTAGSLKRRITMLPGQSY CCCEEEECCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCEEEEHHHHHCEEEECCCCCC PVNFDDIEFTFSGEKNASGVVTMHAVVTGTGRHTIALRTDNLPVEPAARDVDLEPGVPQA CCCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHH IEWRARPSSEAPWIAVAIPDHQISRRKEATGR HEECCCCCCCCCEEEEEECCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1956299; 2604391; 1375311; 8880921; 8916925 [H]