| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116619275
Identifier: 116619275
GI number: 116619275
Start: 172577
End: 173839
Strand: Direct
Name: 116619275
Synonym: Acid_0131
Alternate gene names: NA
Gene position: 172577-173839 (Clockwise)
Preceding gene: 116619274
Following gene: 116619276
Centisome position: 1.73
GC content: 62.31
Gene sequence:
>1263_bases GTGTCTTCAGGTTCCATAACCAGAGTAAGCATCGCGCTAATCCTGCTGTTGATTTTCAGCGGGTGTGCCAAAGGCCCGCC GGCGGCACGGCCGATAGGCGAGGCCTTCGTCGGTCCCGCTACTTTGAAAATTCGGAGCGATATCCCGCTCCAGTCTCCCG TCGTCACCACCGTCAAACACGGCGATCGCCTCGAGATCCTCCAGACCAAGCGCCGCTTCCTCCGGGTCCGCACGCCCCAT GGCGCGGAAGGTTGGACCGACGAACGCCAGTTGCTTGCCGCGTCCGACATGGCCGCGCTGCGCGAGCTCGCCGCGCGCGC CGCCAAGATGCCGTCGCAGGGAGTCGCCACTACCTACGCAACACTGAATATTCATACCCAGCCCGCCGTCTCTTCACCCA GCTTTCTGCAGTTGAAGGAAAACGAAAGGTTCGACGTGCTGCAATCCGTCCTCTTTCCGCGCTCCGACGCCCCGCGCGTT CCCCTCATTCCCCCCACTCCCAAGAAAGCCAAAGCGCTGCCGAAGAAAGAGAAGAAATCTTCCAAGATCCCTCCTCCCCC AATGCCCAAGCCCCCGCCTCTGCCCGCCGACTGGCTGGAGCTTTCCAAGAGCGAGCGTGACGAAGCCGCCGCCGAGGCCG GCGAAACCCCTCCCGTAAAAGCAGCGCCGCGACTCGATGGCTGGAGCCTCATTCGTGCTGCCGGCGGACAGTCCGGCTGG GTCCTCACCCGCCTCGTCTCCATGGCCATCCCCGACGAGGTCGCGCAGTATGCCGAAGGCAAGCGCATCGTGAGCTACTT CCCCCTCGGCGAAATTGAGGATGGCGATCAAAAGAAAAAGATCTGGCTGTGGGCCACCACCGCCGATAGCAAACAACCCT GGGATTTCGATAGCTTCCGGGTCTTCATCTGGAGCCTCCGCCATCACCGCTACGAAACCAGCTACATCGAGCGCAAAATC AAAGGCTATTCGCCGATTCTGCGCAAGCAGGTGGACTATACCTTAGGCAAGGGGCAGCCGGCGAAGTACGAGGGCTTTTC CATCTGCATGGAGAAGAACGACGGCCAGCGCGTCCGCCGTGAGTACGCCGTTCTGGGCGGCGCAATCCGCTTCGCCGGGG AACAGCCCTGCGAAGCTCCCCAGGCCCCTGCTTTTGCTCAGTCCCCCGCGCCCATCGCCGTCACCGAAGCCGCGCCCGAA GCTCCCCACGAAACTCTCTCGCAAAAGCTGAAGAAGCGCTGGCATGCTCTCACAGGCAAGTGA
Upstream 100 bases:
>100_bases CGAGCCTGAGAGCAGATACATCGCACGCTTAATCCTGAGCGTCACCACTTCATTTTAAATTGGGGCCGGACTGGTACGGC TGGTAAACTCATATATAAGT
Downstream 100 bases:
>100_bases GGCCGGAAAGTGAAGACTCGGAAGTTCCGCCACGTTGCGGCGGAGGGTCCATTGTGTTATTTATGGGTTCAAGTCGGAAG AATCCAACTAAACCGCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSSGSITRVSIALILLLIFSGCAKGPPAARPIGEAFVGPATLKIRSDIPLQSPVVTTVKHGDRLEILQTKRRFLRVRTPH GAEGWTDERQLLAASDMAALRELAARAAKMPSQGVATTYATLNIHTQPAVSSPSFLQLKENERFDVLQSVLFPRSDAPRV PLIPPTPKKAKALPKKEKKSSKIPPPPMPKPPPLPADWLELSKSERDEAAAEAGETPPVKAAPRLDGWSLIRAAGGQSGW VLTRLVSMAIPDEVAQYAEGKRIVSYFPLGEIEDGDQKKKIWLWATTADSKQPWDFDSFRVFIWSLRHHRYETSYIERKI KGYSPILRKQVDYTLGKGQPAKYEGFSICMEKNDGQRVRREYAVLGGAIRFAGEQPCEAPQAPAFAQSPAPIAVTEAAPE APHETLSQKLKKRWHALTGK
Sequences:
>Translated_420_residues MSSGSITRVSIALILLLIFSGCAKGPPAARPIGEAFVGPATLKIRSDIPLQSPVVTTVKHGDRLEILQTKRRFLRVRTPH GAEGWTDERQLLAASDMAALRELAARAAKMPSQGVATTYATLNIHTQPAVSSPSFLQLKENERFDVLQSVLFPRSDAPRV PLIPPTPKKAKALPKKEKKSSKIPPPPMPKPPPLPADWLELSKSERDEAAAEAGETPPVKAAPRLDGWSLIRAAGGQSGW VLTRLVSMAIPDEVAQYAEGKRIVSYFPLGEIEDGDQKKKIWLWATTADSKQPWDFDSFRVFIWSLRHHRYETSYIERKI KGYSPILRKQVDYTLGKGQPAKYEGFSICMEKNDGQRVRREYAVLGGAIRFAGEQPCEAPQAPAFAQSPAPIAVTEAAPE APHETLSQKLKKRWHALTGK >Mature_419_residues SSGSITRVSIALILLLIFSGCAKGPPAARPIGEAFVGPATLKIRSDIPLQSPVVTTVKHGDRLEILQTKRRFLRVRTPHG AEGWTDERQLLAASDMAALRELAARAAKMPSQGVATTYATLNIHTQPAVSSPSFLQLKENERFDVLQSVLFPRSDAPRVP LIPPTPKKAKALPKKEKKSSKIPPPPMPKPPPLPADWLELSKSERDEAAAEAGETPPVKAAPRLDGWSLIRAAGGQSGWV LTRLVSMAIPDEVAQYAEGKRIVSYFPLGEIEDGDQKKKIWLWATTADSKQPWDFDSFRVFIWSLRHHRYETSYIERKIK GYSPILRKQVDYTLGKGQPAKYEGFSICMEKNDGQRVRREYAVLGGAIRFAGEQPCEAPQAPAFAQSPAPIAVTEAAPEA PHETLSQKLKKRWHALTGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46297; Mature: 46166
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGSITRVSIALILLLIFSGCAKGPPAARPIGEAFVGPATLKIRSDIPLQSPVVTTVKH CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCHHHCC GDRLEILQTKRRFLRVRTPHGAEGWTDERQLLAASDMAALRELAARAAKMPSQGVATTYA CCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE TLNIHTQPAVSSPSFLQLKENERFDVLQSVLFPRSDAPRVPLIPPTPKKAKALPKKEKKS EEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHC SKIPPPPMPKPPPLPADWLELSKSERDEAAAEAGETPPVKAAPRLDGWSLIRAAGGQSGW CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCH VLTRLVSMAIPDEVAQYAEGKRIVSYFPLGEIEDGDQKKKIWLWATTADSKQPWDFDSFR HHHHHHHHHCHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHH VFIWSLRHHRYETSYIERKIKGYSPILRKQVDYTLGKGQPAKYEGFSICMEKNDGQRVRR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHH EYAVLGGAIRFAGEQPCEAPQAPAFAQSPAPIAVTEAAPEAPHETLSQKLKKRWHALTGK HHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSGSITRVSIALILLLIFSGCAKGPPAARPIGEAFVGPATLKIRSDIPLQSPVVTTVKH CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCHHHCC GDRLEILQTKRRFLRVRTPHGAEGWTDERQLLAASDMAALRELAARAAKMPSQGVATTYA CCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE TLNIHTQPAVSSPSFLQLKENERFDVLQSVLFPRSDAPRVPLIPPTPKKAKALPKKEKKS EEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHC SKIPPPPMPKPPPLPADWLELSKSERDEAAAEAGETPPVKAAPRLDGWSLIRAAGGQSGW CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCH VLTRLVSMAIPDEVAQYAEGKRIVSYFPLGEIEDGDQKKKIWLWATTADSKQPWDFDSFR HHHHHHHHHCHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHH VFIWSLRHHRYETSYIERKIKGYSPILRKQVDYTLGKGQPAKYEGFSICMEKNDGQRVRR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHH EYAVLGGAIRFAGEQPCEAPQAPAFAQSPAPIAVTEAAPEAPHETLSQKLKKRWHALTGK HHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA