| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is mnmG
Identifier: 116619160
GI number: 116619160
Start: 20991
End: 22805
Strand: Direct
Name: mnmG
Synonym: Acid_0015
Alternate gene names: 116619160
Gene position: 20991-22805 (Clockwise)
Preceding gene: 116619155
Following gene: 116619161
Centisome position: 0.21
GC content: 62.59
Gene sequence:
>1815_bases ATGGTAGCAATGCCCGAACGGTACGACGTCGTTGTTATCGGCGCCGGCCACGCCGGCTGCGAAGCGGCGCGCGCCTGTGC GCGCATCGGCCTGCGCACCGCCATGGTCACCATGAACCTCGACCTGATCGCGCAGATGAGCTGCAACCCCGCGATCGGCG GCATCGCCAAAGGCCACCTCGTCCGCGAGATCGACGCCTTGGGCGGCGTCATGGGAGAGGTCGCCGATTCCGTCGGCATC CAGTTCCGCCTGCTGAACACTTCCCGCGGTCCCGCCGTCTGGTCTCCGCGCGCGCAGATGGATAAGAAGCTTTACCGCTT CCGCATGCGCGAGGTCCTGGAAGCGGAACCCAATTTACGCATCAAGCAGGCTGAGGTGGCTGCCCTGACCTTCGATGCCG TCCGCCGAGTCAACGGTGTGCTCCTGCGTGACGGCCGCACGATTCCGGCGGGAGCGGTGATCGTCACCACAGGGACTTTC CTGAACGGCCTGGCACACGTCGGTGAGATGACCTATAGCTGCGGCCGCAACGGCGAAGCGCCCTCCCAACTCTTGGGTGA CCAACTGCGCAGCATGGGCTTGAACTGGACCCGCTTGAAAACCGGGACACCTCCCCGGCTCGACGGCCGCAGTATCGATT GGTCCAGTTTCGAGCCTCAGGCCGGTGATGCTGAGCCCACCCCGTTCTCTTTTCTGACTGGCCGGATCGAGCGCCAGCAG ATCCAGTGTCACATCGGCTACACCACAGACGAAACCCGCCGCGTCCTGCAGGAGGCGATTCCCCGCTCACCTTTATATAG CGGCCAGATTGAAGGCGTGGGTCCGCGCTATTGTCCGTCGATAGAGGACAAGTTCGTCAAATTCCCGGACAAGGTCCGTC ACCAGATTTTTCTAGAACCGGAAGGGCTGGATACCCATGAGGTCTACGTGAACGGAATGTCCACCAGCATGCCGACCGAT GTACAGGTCGCCATGGTTGCCTCCATTCCTGGCCTGGAGCAGGCCGAAATGATCCGCCCGGGCTACGCCATTGAATATGA TGCGATCGACCCTCGTGAGCTAAACCACACCCTGGAGGTCAAATCGATTCCCGGTCTCTACCTCGCCGGTCAGATCAACG GCACGTCGGGCTATGAAGAGGCGGGAATCCAGGGTCTCATCGCCGGGTTGAACGCAGCTATGAGCTTGGGAGGCAGCGAC CCGGTGATCATCGGCCGGACCGAGGGCTACGCCGGAATCCTGGTGGACGACCTGATCACCAAGGGCGCCGACGAACCGTA CCGGATGTTTACTTCGCGTGCCGAATTTCGCCTTCACCTTCGCATCGATAACGCCGATGCCCGCCTCACTCCCCTCGGCC GCCGCGCCGGTCTCGCTACCGACGAGCGTTGGGAGCTCTTCCAGCGCAAGGAACGCCAGAAGTTGCGTCTCACGCAGGCC TTCGAAACCCACAAGAACGGCCAACTGCTGAAGCGCCCTGAGGTCTCGATCAGCGATTTCCTTCCCTGGATCGTGGAAGT CCTGGGCGAAGCACCCTGTCGCGGACTTCTGGAGACCGTCTCCACTGAGGCCAAATATGGCGGGTACATCCAGCAGCAGG AGCGCCAGATGGCGCGGATGAAGGACTCCGAGCGCCGCGCTATCCCGCATGGGTTCGAATACAGAGGAATTCCCGGGCTA TCGCGTGAGATTCAGGACAAGTTGGACAAGGTCCGCCCCGGCACGCTCGGTCAGGCCGGCCGCGTGCCCGGCGTCACGCC AGCCGCCATCGCTGTGCTGGACTGCTACCTCAGCCTCCACATCGGGCCGAACTAA
Upstream 100 bases:
>100_bases CGGGGTTGGCGAAAACCTCCACCCCTGGTGACTGCGCCAGCTTCCAGCACAGCGCATGCTCTCGTCCGCCACTGCCGATA ACCAGTATCTTCACCGTACA
Downstream 100 bases:
>100_bases TCTGTTTCACGTGAAACAACCTCATTCCCTCACACGAACATCAGCCGTTTTGTTTCACGTGAAACAGCATGCTACCATCA CCCCTTGAGCCGAGTCTTCG
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MVAMPERYDVVVIGAGHAGCEAARACARIGLRTAMVTMNLDLIAQMSCNPAIGGIAKGHLVREIDALGGVMGEVADSVGI QFRLLNTSRGPAVWSPRAQMDKKLYRFRMREVLEAEPNLRIKQAEVAALTFDAVRRVNGVLLRDGRTIPAGAVIVTTGTF LNGLAHVGEMTYSCGRNGEAPSQLLGDQLRSMGLNWTRLKTGTPPRLDGRSIDWSSFEPQAGDAEPTPFSFLTGRIERQQ IQCHIGYTTDETRRVLQEAIPRSPLYSGQIEGVGPRYCPSIEDKFVKFPDKVRHQIFLEPEGLDTHEVYVNGMSTSMPTD VQVAMVASIPGLEQAEMIRPGYAIEYDAIDPRELNHTLEVKSIPGLYLAGQINGTSGYEEAGIQGLIAGLNAAMSLGGSD PVIIGRTEGYAGILVDDLITKGADEPYRMFTSRAEFRLHLRIDNADARLTPLGRRAGLATDERWELFQRKERQKLRLTQA FETHKNGQLLKRPEVSISDFLPWIVEVLGEAPCRGLLETVSTEAKYGGYIQQQERQMARMKDSERRAIPHGFEYRGIPGL SREIQDKLDKVRPGTLGQAGRVPGVTPAAIAVLDCYLSLHIGPN
Sequences:
>Translated_604_residues MVAMPERYDVVVIGAGHAGCEAARACARIGLRTAMVTMNLDLIAQMSCNPAIGGIAKGHLVREIDALGGVMGEVADSVGI QFRLLNTSRGPAVWSPRAQMDKKLYRFRMREVLEAEPNLRIKQAEVAALTFDAVRRVNGVLLRDGRTIPAGAVIVTTGTF LNGLAHVGEMTYSCGRNGEAPSQLLGDQLRSMGLNWTRLKTGTPPRLDGRSIDWSSFEPQAGDAEPTPFSFLTGRIERQQ IQCHIGYTTDETRRVLQEAIPRSPLYSGQIEGVGPRYCPSIEDKFVKFPDKVRHQIFLEPEGLDTHEVYVNGMSTSMPTD VQVAMVASIPGLEQAEMIRPGYAIEYDAIDPRELNHTLEVKSIPGLYLAGQINGTSGYEEAGIQGLIAGLNAAMSLGGSD PVIIGRTEGYAGILVDDLITKGADEPYRMFTSRAEFRLHLRIDNADARLTPLGRRAGLATDERWELFQRKERQKLRLTQA FETHKNGQLLKRPEVSISDFLPWIVEVLGEAPCRGLLETVSTEAKYGGYIQQQERQMARMKDSERRAIPHGFEYRGIPGL SREIQDKLDKVRPGTLGQAGRVPGVTPAAIAVLDCYLSLHIGPN >Mature_604_residues MVAMPERYDVVVIGAGHAGCEAARACARIGLRTAMVTMNLDLIAQMSCNPAIGGIAKGHLVREIDALGGVMGEVADSVGI QFRLLNTSRGPAVWSPRAQMDKKLYRFRMREVLEAEPNLRIKQAEVAALTFDAVRRVNGVLLRDGRTIPAGAVIVTTGTF LNGLAHVGEMTYSCGRNGEAPSQLLGDQLRSMGLNWTRLKTGTPPRLDGRSIDWSSFEPQAGDAEPTPFSFLTGRIERQQ IQCHIGYTTDETRRVLQEAIPRSPLYSGQIEGVGPRYCPSIEDKFVKFPDKVRHQIFLEPEGLDTHEVYVNGMSTSMPTD VQVAMVASIPGLEQAEMIRPGYAIEYDAIDPRELNHTLEVKSIPGLYLAGQINGTSGYEEAGIQGLIAGLNAAMSLGGSD PVIIGRTEGYAGILVDDLITKGADEPYRMFTSRAEFRLHLRIDNADARLTPLGRRAGLATDERWELFQRKERQKLRLTQA FETHKNGQLLKRPEVSISDFLPWIVEVLGEAPCRGLLETVSTEAKYGGYIQQQERQMARMKDSERRAIPHGFEYRGIPGL SREIQDKLDKVRPGTLGQAGRVPGVTPAAIAVLDCYLSLHIGPN
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=628, Percent_Identity=41.7197452229299, Blast_Score=443, Evalue=1e-124, Organism=Homo sapiens, GI19882217, Length=653, Percent_Identity=40.1225114854518, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI183227703, Length=668, Percent_Identity=39.2215568862275, Blast_Score=425, Evalue=1e-119, Organism=Escherichia coli, GI2367273, Length=621, Percent_Identity=48.792270531401, Blast_Score=563, Evalue=1e-161, Organism=Caenorhabditis elegans, GI17534255, Length=617, Percent_Identity=41.4910858995138, Blast_Score=457, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6321202, Length=620, Percent_Identity=42.9032258064516, Blast_Score=484, Evalue=1e-137, Organism=Drosophila melanogaster, GI24658174, Length=635, Percent_Identity=43.4645669291339, Blast_Score=471, Evalue=1e-133,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_SOLUE (Q02D35)
Other databases:
- EMBL: CP000473 - RefSeq: YP_821316.1 - ProteinModelPortal: Q02D35 - SMR: Q02D35 - STRING: Q02D35 - GeneID: 4431703 - GenomeReviews: CP000473_GR - KEGG: sus:Acid_0015 - NMPDR: fig|234267.9.peg.13 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - PhylomeDB: Q02D35 - ProtClustDB: PRK05192 - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 66374; Mature: 66374
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: BINDING 126-126 BINDING 182-182 BINDING 371-371
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAMPERYDVVVIGAGHAGCEAARACARIGLRTAMVTMNLDLIAQMSCNPAIGGIAKGHL CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEECHHHEEECCCCCCCCCCHHHHH VREIDALGGVMGEVADSVGIQFRLLNTSRGPAVWSPRAQMDKKLYRFRMREVLEAEPNLR HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE IKQAEVAALTFDAVRRVNGVLLRDGRTIPAGAVIVTTGTFLNGLAHVGEMTYSCGRNGEA EEHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCC PSQLLGDQLRSMGLNWTRLKTGTPPRLDGRSIDWSSFEPQAGDAEPTPFSFLTGRIERQQ HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEE IQCHIGYTTDETRRVLQEAIPRSPLYSGQIEGVGPRYCPSIEDKFVKFPDKVRHQIFLEP EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCEEEECC EGLDTHEVYVNGMSTSMPTDVQVAMVASIPGLEQAEMIRPGYAIEYDAIDPRELNHTLEV CCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEEECCCCHHHCCCEEEE KSIPGLYLAGQINGTSGYEEAGIQGLIAGLNAAMSLGGSDPVIIGRTEGYAGILVDDLIT ECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH KGADEPYRMFTSRAEFRLHLRIDNADARLTPLGRRAGLATDERWELFQRKERQKLRLTQA CCCCCHHHHHHCCCEEEEEEEEECCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH FETHKNGQLLKRPEVSISDFLPWIVEVLGEAPCRGLLETVSTEAKYGGYIQQQERQMARM HHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH KDSERRAIPHGFEYRGIPGLSREIQDKLDKVRPGTLGQAGRVPGVTPAAIAVLDCYLSLH CCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEE IGPN ECCC >Mature Secondary Structure MVAMPERYDVVVIGAGHAGCEAARACARIGLRTAMVTMNLDLIAQMSCNPAIGGIAKGHL CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEECHHHEEECCCCCCCCCCHHHHH VREIDALGGVMGEVADSVGIQFRLLNTSRGPAVWSPRAQMDKKLYRFRMREVLEAEPNLR HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE IKQAEVAALTFDAVRRVNGVLLRDGRTIPAGAVIVTTGTFLNGLAHVGEMTYSCGRNGEA EEHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCC PSQLLGDQLRSMGLNWTRLKTGTPPRLDGRSIDWSSFEPQAGDAEPTPFSFLTGRIERQQ HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEE IQCHIGYTTDETRRVLQEAIPRSPLYSGQIEGVGPRYCPSIEDKFVKFPDKVRHQIFLEP EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCEEEECC EGLDTHEVYVNGMSTSMPTDVQVAMVASIPGLEQAEMIRPGYAIEYDAIDPRELNHTLEV CCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEEECCCCHHHCCCEEEE KSIPGLYLAGQINGTSGYEEAGIQGLIAGLNAAMSLGGSDPVIIGRTEGYAGILVDDLIT ECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH KGADEPYRMFTSRAEFRLHLRIDNADARLTPLGRRAGLATDERWELFQRKERQKLRLTQA CCCCCHHHHHHCCCEEEEEEEEECCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH FETHKNGQLLKRPEVSISDFLPWIVEVLGEAPCRGLLETVSTEAKYGGYIQQQERQMARM HHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH KDSERRAIPHGFEYRGIPGLSREIQDKLDKVRPGTLGQAGRVPGVTPAAIAVLDCYLSLH CCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEE IGPN ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA