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The map label for this gene is 116619151

Identifier: 116619151

GI number: 116619151

Start: 8627

End: 9400

Strand: Direct

Name: 116619151

Synonym: Acid_0006

Alternate gene names: NA

Gene position: 8627-9400 (Clockwise)

Preceding gene: 116619148

Following gene: 116619152

Centisome position: 0.09

GC content: 65.12

Gene sequence:

>774_bases
ATGCCGAACCTGTTATCCACGCTCGTCCTCTTCGCCCACACCTACCCGGTCGATGGAATTGTGGTCGCGGTGGACCCCCA
GGCCCGCACCATGCTCGTCTCCCACCGCCCTATTCCGCACTACATGCCCGCCATGATGATGCCCTTCCGCGTCGAAAATC
CCGCCGTCCTCCAGCCCCTTCATCCCGGCGCCCGCATCACCTTCGATCTCGCCGTCACCAAATCGCAAGCGCTCGCGCGC
AATGTCCGCGCCACGGGCGATCCCGATGCCGCCCTCCCGGCACCCCCGCAAAAGCTCGCCATCGGCGCGCCCCTCCCGGA
ATTCGCGCTCACCGATCAACACGGCCGCACCGTCACCCCCGCCGATTTCCGCGGCCAAATCGTCGCCATCGATTTCATCT
ATTCGCGCTGCCCCCTTCCCGATGTTTGCCCGCGGCTCTCCGCCAATTTCGCCATGCTGCAGCGCCGCTTCGGCGCTAAC
ATCACCCTGCTTTCCGTCACGGTGGATCCCGACTACGATACTCCCGCCGTCCTCGCCGATTACGCTCGCCGCTGGTCGGC
CGGCCCCGCCTGGCACTTCCTCACCGGCGACGTCGCGCCGCTAGCCGCCGCCCTCGGCGAAATCTATTGGGCTGGCGAAG
GCTCCATCGGACACAATTCCACTACCTGCATCATCGATCGCACAGGCCGCCTCGCCGCCGTCATCGAAGGCTCCAACTAC
CGGCCCGATCAACTGGTCAACCTGATATCCCGTCAACTGGAGACTCATCCATGA

Upstream 100 bases:

>100_bases
CGTCAGTCCACCCACGTCCATTCGGGGACTTGGAAAACTCTCCGCGAACGTCAGGGAGCGATCTAAAAACACCGTATAAT
TCCTAATAACACTGGGGATC

Downstream 100 bases:

>100_bases
AGTTCGCCGTCCTCTGCACGCTCGTCCTCGCCGCCCTCGCACAGCAGCCCAAGGGCGCTGACAACTGCGCCCCGCCGCCG
AGTTCGCTGGCTCCCACGCT

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: Electron Transport /Senc; SCO1/SenC Family Protein; Oxidoreductase Protein; Sco1/Senc Family Protein; SCO2/SenC Family Protein; SenC Homolog; Cytochrome C Oxidase Biogenesis Protein; Cytochrome C Oxidase Cu(A) Center Assembly Protein; SCO1/SenC Superfamily; Secreted Protein; Lipoprotein

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MPNLLSTLVLFAHTYPVDGIVVAVDPQARTMLVSHRPIPHYMPAMMMPFRVENPAVLQPLHPGARITFDLAVTKSQALAR
NVRATGDPDAALPAPPQKLAIGAPLPEFALTDQHGRTVTPADFRGQIVAIDFIYSRCPLPDVCPRLSANFAMLQRRFGAN
ITLLSVTVDPDYDTPAVLADYARRWSAGPAWHFLTGDVAPLAAALGEIYWAGEGSIGHNSTTCIIDRTGRLAAVIEGSNY
RPDQLVNLISRQLETHP

Sequences:

>Translated_257_residues
MPNLLSTLVLFAHTYPVDGIVVAVDPQARTMLVSHRPIPHYMPAMMMPFRVENPAVLQPLHPGARITFDLAVTKSQALAR
NVRATGDPDAALPAPPQKLAIGAPLPEFALTDQHGRTVTPADFRGQIVAIDFIYSRCPLPDVCPRLSANFAMLQRRFGAN
ITLLSVTVDPDYDTPAVLADYARRWSAGPAWHFLTGDVAPLAAALGEIYWAGEGSIGHNSTTCIIDRTGRLAAVIEGSNY
RPDQLVNLISRQLETHP
>Mature_256_residues
PNLLSTLVLFAHTYPVDGIVVAVDPQARTMLVSHRPIPHYMPAMMMPFRVENPAVLQPLHPGARITFDLAVTKSQALARN
VRATGDPDAALPAPPQKLAIGAPLPEFALTDQHGRTVTPADFRGQIVAIDFIYSRCPLPDVCPRLSANFAMLQRRFGANI
TLLSVTVDPDYDTPAVLADYARRWSAGPAWHFLTGDVAPLAAALGEIYWAGEGSIGHNSTTCIIDRTGRLAAVIEGSNYR
PDQLVNLISRQLETHP

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27931; Mature: 27800

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLLSTLVLFAHTYPVDGIVVAVDPQARTMLVSHRPIPHYMPAMMMPFRVENPAVLQPL
CCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHCCEECCCCCEECCC
HPGARITFDLAVTKSQALARNVRATGDPDAALPAPPQKLAIGAPLPEFALTDQHGRTVTP
CCCCEEEEEEEECHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCCCCEECCCCCCEECC
ADFRGQIVAIDFIYSRCPLPDVCPRLSANFAMLQRRFGANITLLSVTVDPDYDTPAVLAD
CCCCCCEEEEEEEECCCCCCHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHHH
YARRWSAGPAWHFLTGDVAPLAAALGEIYWAGEGSIGHNSTTCIIDRTGRLAAVIEGSNY
HHHHCCCCCCEEEECCCHHHHHHHHHCEEECCCCCCCCCCEEEEEECCCCEEEEEECCCC
RPDQLVNLISRQLETHP
CHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PNLLSTLVLFAHTYPVDGIVVAVDPQARTMLVSHRPIPHYMPAMMMPFRVENPAVLQPL
CHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHCCEECCCCCEECCC
HPGARITFDLAVTKSQALARNVRATGDPDAALPAPPQKLAIGAPLPEFALTDQHGRTVTP
CCCCEEEEEEEECHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCCCCEECCCCCCEECC
ADFRGQIVAIDFIYSRCPLPDVCPRLSANFAMLQRRFGANITLLSVTVDPDYDTPAVLAD
CCCCCCEEEEEEEECCCCCCHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHHH
YARRWSAGPAWHFLTGDVAPLAAALGEIYWAGEGSIGHNSTTCIIDRTGRLAAVIEGSNY
HHHHCCCCCCEEEECCCHHHHHHHHHCEEECCCCCCCCCCEEEEEECCCCEEEEEECCCC
RPDQLVNLISRQLETHP
CHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA