| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is pstS1
Identifier: 116517085
GI number: 116517085
Start: 1263159
End: 1264037
Strand: Reverse
Name: pstS1
Synonym: SPD_1232
Alternate gene names: 116517085
Gene position: 1264037-1263159 (Counterclockwise)
Preceding gene: 116516379
Following gene: 116516273
Centisome position: 61.78
GC content: 44.03
Gene sequence:
>879_bases GTGAAAAAAAGAAAAAAGCTTGCTCTGTCTCTTATCGCTTTTTGGCTGACGGCTTGTTTAGTAGGCTGTGCTAGCTGGAT TGATCGTGGAGAATCCATAACGGCTGTTGGCTCAACTGCCTTGCAACCCTTGGTTGAAGTAGCGGCAGATGAATTTGGCA CGATTCATGTTGGAAAAACGGTCAATGTCCAAGGGGGAGGTTCTGGTACAGGCTTGTCCCAGGTTCAGTCTGGGGCAGTT GATATAGGAAACTCAGATGTATTTGCTGAGGAAAAAGACGGAATTGATGCTTCTGCTCTTGTTGACCACAAGGTCGCGGT AGCTGGCTTGGCTCTGATTGTCAATAAGGAGGTTGATGTTGATAACCTAACGACAGAGCAACTTCGTCAAATCTTCATAG GTGAGGTAACCAATTGGAAAGAGGTTGGTGGTAAGGACTTACCCATCTCTGTTATCAATCGGGCAGCCGGCTCTGGCTCT CGTGCTACCTTTGATACTGTCATTATGGAAGGTCAGTCTGCCATGCAAAGTCAGGAGCAGGATTCAAATGGAGCGGTAAA ATCAATCGTATCAAAAAGTCCAGGAGCTATCTCTTATTTATCTCTTACCTATATAGATGATTCGGTCAAAAGCATGAAGT TGAATGGCTATGACTTAAGTCCAGAAAATATAAGTAGCAATAATTGGCCCTTGTGGTCTTATGAGCATATGTATACATTG GGGCAGCCCAATGAGTTGGCTGCAGAATTTCTCAATTTTGTTCTCTCGGATGAGACCCAAGAAGGGATTGTCAAAGGATT GAAGTATATTCCGATTAAGGAAATGAAGGTTGAAAAAGATGCTGCCGGAACTGTGACAGTGTTGGAAGGGAGACAATAA
Upstream 100 bases:
>100_bases AATCAATTGCGCAGAAATTTGGTAAGAATTCATGCGTCAACTCATAAAGAACTACTTAAAAAATTCACAGTATTCATAAT TATTTTCGAGGAGAAAAACA
Downstream 100 bases:
>100_bases TGAATCAAGAAGAATTAGCTAAGAAAATGTTGCTTCCATCAAAGAATTCTCGTCTGGAGAAATTAGGAAAAGGTTTGACC TTTGCCTGTCTTTCTTTGAT
Product: phosphate ABC transporter phosphate-binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 1
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKKRKKLALSLIAFWLTACLVGCASWIDRGESITAVGSTALQPLVEVAADEFGTIHVGKTVNVQGGGSGTGLSQVQSGAV DIGNSDVFAEEKDGIDASALVDHKVAVAGLALIVNKEVDVDNLTTEQLRQIFIGEVTNWKEVGGKDLPISVINRAAGSGS RATFDTVIMEGQSAMQSQEQDSNGAVKSIVSKSPGAISYLSLTYIDDSVKSMKLNGYDLSPENISSNNWPLWSYEHMYTL GQPNELAAEFLNFVLSDETQEGIVKGLKYIPIKEMKVEKDAAGTVTVLEGRQ
Sequences:
>Translated_292_residues MKKRKKLALSLIAFWLTACLVGCASWIDRGESITAVGSTALQPLVEVAADEFGTIHVGKTVNVQGGGSGTGLSQVQSGAV DIGNSDVFAEEKDGIDASALVDHKVAVAGLALIVNKEVDVDNLTTEQLRQIFIGEVTNWKEVGGKDLPISVINRAAGSGS RATFDTVIMEGQSAMQSQEQDSNGAVKSIVSKSPGAISYLSLTYIDDSVKSMKLNGYDLSPENISSNNWPLWSYEHMYTL GQPNELAAEFLNFVLSDETQEGIVKGLKYIPIKEMKVEKDAAGTVTVLEGRQ >Mature_292_residues MKKRKKLALSLIAFWLTACLVGCASWIDRGESITAVGSTALQPLVEVAADEFGTIHVGKTVNVQGGGSGTGLSQVQSGAV DIGNSDVFAEEKDGIDASALVDHKVAVAGLALIVNKEVDVDNLTTEQLRQIFIGEVTNWKEVGGKDLPISVINRAAGSGS RATFDTVIMEGQSAMQSQEQDSNGAVKSIVSKSPGAISYLSLTYIDDSVKSMKLNGYDLSPENISSNNWPLWSYEHMYTL GQPNELAAEFLNFVLSDETQEGIVKGLKYIPIKEMKVEKDAAGTVTVLEGRQ
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family
Homologues:
None
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): PSTS1_STRPN (Q97Q31)
Other databases:
- EMBL: AE005672 - PIR: A95163 - RefSeq: NP_345858.1 - ProteinModelPortal: Q97Q31 - EnsemblBacteria: EBSTRT00000026990 - GeneID: 931432 - GenomeReviews: AE005672_GR - KEGG: spn:SP_1400 - TIGR: SP_1400 - GeneTree: EBGT00050000027161 - HOGENOM: HBG703251 - OMA: GSYKVAR - ProtClustDB: CLSK2752109 - BioCyc: SPNE170187-1:SP_1400-MONOMER - InterPro: IPR011862 - TIGRFAMs: TIGR02136
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31202; Mature: 31202
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRKKLALSLIAFWLTACLVGCASWIDRGESITAVGSTALQPLVEVAADEFGTIHVGKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEEEECCE VNVQGGGSGTGLSQVQSGAVDIGNSDVFAEEKDGIDASALVDHKVAVAGLALIVNKEVDV EEECCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEEHEEECCCCC DNLTTEQLRQIFIGEVTNWKEVGGKDLPISVINRAAGSGSRATFDTVIMEGQSAMQSQEQ CCCCHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHCC DSNGAVKSIVSKSPGAISYLSLTYIDDSVKSMKLNGYDLSPENISSNNWPLWSYEHMYTL CCCHHHHHHHHCCCCCEEEEEEEEECCCHHHEEECCCCCCCCCCCCCCCCEEEHHHEEEC GQPNELAAEFLNFVLSDETQEGIVKGLKYIPIKEMKVEKDAAGTVTVLEGRQ CCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHEECCCCCCEEEEECCCC >Mature Secondary Structure MKKRKKLALSLIAFWLTACLVGCASWIDRGESITAVGSTALQPLVEVAADEFGTIHVGKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEEEECCE VNVQGGGSGTGLSQVQSGAVDIGNSDVFAEEKDGIDASALVDHKVAVAGLALIVNKEVDV EEECCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEEHEEECCCCC DNLTTEQLRQIFIGEVTNWKEVGGKDLPISVINRAAGSGSRATFDTVIMEGQSAMQSQEQ CCCCHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHCC DSNGAVKSIVSKSPGAISYLSLTYIDDSVKSMKLNGYDLSPENISSNNWPLWSYEHMYTL CCCHHHHHHHHCCCCCEEEEEEEEECCCHHHEEECCCCCCCCCCCCCCCCEEEHHHEEEC GQPNELAAEFLNFVLSDETQEGIVKGLKYIPIKEMKVEKDAAGTVTVLEGRQ CCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHEECCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916