| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is pstS
Identifier: 116516790
GI number: 116516790
Start: 1881908
End: 1882783
Strand: Direct
Name: pstS
Synonym: SPD_1910
Alternate gene names: 116516790
Gene position: 1881908-1882783 (Clockwise)
Preceding gene: 116515950
Following gene: 116515718
Centisome position: 91.97
GC content: 39.95
Gene sequence:
>876_bases ATGAAATTCAAAAAAATGCTTACTCTTGCAGCCATTGGCTTATCAGGATTTGGGCTTGTTGCCTGTGGCAATCAGTCAGC TGCTTCCAAACAGTCAGCTTCAGGAACGATTGAGGTGATTTCACGAGAAAATGGCTCTGGAACACGGGGTGCCTTCACAG AAATCACAGGGATTCTCAAAAAAGACGGTGATAAAAAAATTGACAACACTGCCAAAACAGCTGTGATTCAAAATAGTACA GAAGGTGTTCTCTCAGCAGTTCAAGGGAATGCTAATGCTATCGGCTACATCTCCTTGGGATCTTTAACGAAATCTGTCAA GGCTTTAGAGATTGATGGTGTCAAGGCTAGTCGAGACACAGTTTTAGATGGTGAATACCCTCTTCAACGTCCCTTCAACA TTGTTTGGTCTTCTAATCTTTCCAAGCTAGGTCAAGATTTTATCAGCTTTATCCACTCCAAACAAGGTCAACAAGTGGTC ACAGATAATAAATTTATTGAAGCTAAAACTGAAACCACAGAATATACAAGCCAACACTTATCAGGCAAGTTGTCTGTTGT AGGTTCCACTTCAGTATCTTCTTTAATGGAAAAATTAGCAGAAGCTTATAAAAAAGAAAATCCAGAAGTTACGATTGATA TTACCTCTAATGGGTCTTCAGCAGGTATTACCGCTGTTAAGGAGAAAACCGCTGATATTGGTATGGTTTCTAGGGAATTA ACTCCTGAAGAAGGTAAGAGTCTCACCCATGATGCTATTGCTTTAGACGGTATTGCTGTTGTGGTCAATAATGACAATAA GGCAAGCCAAGTCAGTATGGCTGAACTTGCAGACGTTTTTAGTGGCAAATTAACCACCTGGGACAAGATTAAATAA
Upstream 100 bases:
>100_bases ATCTTTACATGAATCAGGGATAAACCTTTACAAAGACTTGTTAGACTATAAATGTAGTAAGCCTACACAAGAAAAATACA TAGAGATAAAGGTGATTATT
Downstream 100 bases:
>100_bases AATGTTTGCTCCATAAATCTCTAAAGAGATGCAGACGTTTCATCGTACAATAAGATAAAGAAGGCAAGTAGGGAGGTGTC GTATCTCCCTTACTTTCTTC
Product: phosphate ABC transporter phosphate-binding protein
Products: NA
Alternate protein names: PBP 2
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILKKDGDKKIDNTAKTAVIQNST EGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDTVLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVV TDNKFIEAKTETTEYTSQHLSGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSREL TPEEGKSLTHDAIALDGIAVVVNNDNKASQVSMAELADVFSGKLTTWDKIK
Sequences:
>Translated_291_residues MKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILKKDGDKKIDNTAKTAVIQNST EGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDTVLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVV TDNKFIEAKTETTEYTSQHLSGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSREL TPEEGKSLTHDAIALDGIAVVVNNDNKASQVSMAELADVFSGKLTTWDKIK >Mature_291_residues MKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILKKDGDKKIDNTAKTAVIQNST EGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDTVLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVV TDNKFIEAKTETTEYTSQHLSGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSREL TPEEGKSLTHDAIALDGIAVVVNNDNKASQVSMAELADVFSGKLTTWDKIK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import (Probable)
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSTS2_STRPN (P0C2M5)
Other databases:
- EMBL: AY039745 - EMBL: AE005672 - PIR: G95243 - RefSeq: NP_346504.1 - ProteinModelPortal: P0C2M5 - SMR: P0C2M5 - EnsemblBacteria: EBSTRT00000025820 - GeneID: 931962 - GenomeReviews: AE005672_GR - KEGG: spn:SP_2084 - TIGR: SP_2084 - GeneTree: EBGT00050000027161 - HOGENOM: HBG399653 - OMA: NIVWSSD - ProtClustDB: CLSK626035 - InterPro: IPR005119
Pfam domain/function: PF03466 LysR_substrate
EC number: NA
Molecular weight: Translated: 30757; Mature: 30757
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILK CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHH KDGDKKIDNTAKTAVIQNSTEGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDT CCCCCCCCCHHHHEEEECCHHHHHHHHCCCCCEEEEEEECHHHHHHEEEEECCCCCCCCC VLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVVTDNKFIEAKTETTEYTSQHL EECCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHHC SGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSREL CCEEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHCCC TPEEGKSLTHDAIALDGIAVVVNNDNKASQVSMAELADVFSGKLTTWDKIK CHHCCCCCCCHHEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILK CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHH KDGDKKIDNTAKTAVIQNSTEGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDT CCCCCCCCCHHHHEEEECCHHHHHHHHCCCCCEEEEEEECHHHHHHEEEEECCCCCCCCC VLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVVTDNKFIEAKTETTEYTSQHL EECCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHHC SGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSREL CCEEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHCCC TPEEGKSLTHDAIALDGIAVVVNNDNKASQVSMAELADVFSGKLTTWDKIK CHHCCCCCCCHHEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11705934; 11463916