Definition Streptococcus pneumoniae D39, complete genome.
Accession NC_008533
Length 2,046,115

Click here to switch to the map view.

The map label for this gene is pstS

Identifier: 116516790

GI number: 116516790

Start: 1881908

End: 1882783

Strand: Direct

Name: pstS

Synonym: SPD_1910

Alternate gene names: 116516790

Gene position: 1881908-1882783 (Clockwise)

Preceding gene: 116515950

Following gene: 116515718

Centisome position: 91.97

GC content: 39.95

Gene sequence:

>876_bases
ATGAAATTCAAAAAAATGCTTACTCTTGCAGCCATTGGCTTATCAGGATTTGGGCTTGTTGCCTGTGGCAATCAGTCAGC
TGCTTCCAAACAGTCAGCTTCAGGAACGATTGAGGTGATTTCACGAGAAAATGGCTCTGGAACACGGGGTGCCTTCACAG
AAATCACAGGGATTCTCAAAAAAGACGGTGATAAAAAAATTGACAACACTGCCAAAACAGCTGTGATTCAAAATAGTACA
GAAGGTGTTCTCTCAGCAGTTCAAGGGAATGCTAATGCTATCGGCTACATCTCCTTGGGATCTTTAACGAAATCTGTCAA
GGCTTTAGAGATTGATGGTGTCAAGGCTAGTCGAGACACAGTTTTAGATGGTGAATACCCTCTTCAACGTCCCTTCAACA
TTGTTTGGTCTTCTAATCTTTCCAAGCTAGGTCAAGATTTTATCAGCTTTATCCACTCCAAACAAGGTCAACAAGTGGTC
ACAGATAATAAATTTATTGAAGCTAAAACTGAAACCACAGAATATACAAGCCAACACTTATCAGGCAAGTTGTCTGTTGT
AGGTTCCACTTCAGTATCTTCTTTAATGGAAAAATTAGCAGAAGCTTATAAAAAAGAAAATCCAGAAGTTACGATTGATA
TTACCTCTAATGGGTCTTCAGCAGGTATTACCGCTGTTAAGGAGAAAACCGCTGATATTGGTATGGTTTCTAGGGAATTA
ACTCCTGAAGAAGGTAAGAGTCTCACCCATGATGCTATTGCTTTAGACGGTATTGCTGTTGTGGTCAATAATGACAATAA
GGCAAGCCAAGTCAGTATGGCTGAACTTGCAGACGTTTTTAGTGGCAAATTAACCACCTGGGACAAGATTAAATAA

Upstream 100 bases:

>100_bases
ATCTTTACATGAATCAGGGATAAACCTTTACAAAGACTTGTTAGACTATAAATGTAGTAAGCCTACACAAGAAAAATACA
TAGAGATAAAGGTGATTATT

Downstream 100 bases:

>100_bases
AATGTTTGCTCCATAAATCTCTAAAGAGATGCAGACGTTTCATCGTACAATAAGATAAAGAAGGCAAGTAGGGAGGTGTC
GTATCTCCCTTACTTTCTTC

Product: phosphate ABC transporter phosphate-binding protein

Products: NA

Alternate protein names: PBP 2

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILKKDGDKKIDNTAKTAVIQNST
EGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDTVLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVV
TDNKFIEAKTETTEYTSQHLSGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSREL
TPEEGKSLTHDAIALDGIAVVVNNDNKASQVSMAELADVFSGKLTTWDKIK

Sequences:

>Translated_291_residues
MKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILKKDGDKKIDNTAKTAVIQNST
EGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDTVLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVV
TDNKFIEAKTETTEYTSQHLSGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSREL
TPEEGKSLTHDAIALDGIAVVVNNDNKASQVSMAELADVFSGKLTTWDKIK
>Mature_291_residues
MKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILKKDGDKKIDNTAKTAVIQNST
EGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDTVLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVV
TDNKFIEAKTETTEYTSQHLSGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSREL
TPEEGKSLTHDAIALDGIAVVVNNDNKASQVSMAELADVFSGKLTTWDKIK

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import (Probable)

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSTS2_STRPN (P0C2M5)

Other databases:

- EMBL:   AY039745
- EMBL:   AE005672
- PIR:   G95243
- RefSeq:   NP_346504.1
- ProteinModelPortal:   P0C2M5
- SMR:   P0C2M5
- EnsemblBacteria:   EBSTRT00000025820
- GeneID:   931962
- GenomeReviews:   AE005672_GR
- KEGG:   spn:SP_2084
- TIGR:   SP_2084
- GeneTree:   EBGT00050000027161
- HOGENOM:   HBG399653
- OMA:   NIVWSSD
- ProtClustDB:   CLSK626035
- InterPro:   IPR005119

Pfam domain/function: PF03466 LysR_substrate

EC number: NA

Molecular weight: Translated: 30757; Mature: 30757

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILK
CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHH
KDGDKKIDNTAKTAVIQNSTEGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDT
CCCCCCCCCHHHHEEEECCHHHHHHHHCCCCCEEEEEEECHHHHHHEEEEECCCCCCCCC
VLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVVTDNKFIEAKTETTEYTSQHL
EECCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHHC
SGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSREL
CCEEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHCCC
TPEEGKSLTHDAIALDGIAVVVNNDNKASQVSMAELADVFSGKLTTWDKIK
CHHCCCCCCCHHEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILK
CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHH
KDGDKKIDNTAKTAVIQNSTEGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDT
CCCCCCCCCHHHHEEEECCHHHHHHHHCCCCCEEEEEEECHHHHHHEEEEECCCCCCCCC
VLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVVTDNKFIEAKTETTEYTSQHL
EECCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHHC
SGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSREL
CCEEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHCCC
TPEEGKSLTHDAIALDGIAVVVNNDNKASQVSMAELADVFSGKLTTWDKIK
CHHCCCCCCCHHEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11705934; 11463916