| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is cls [C]
Identifier: 116516680
GI number: 116516680
Start: 187730
End: 189262
Strand: Direct
Name: cls [C]
Synonym: SPD_0185
Alternate gene names: 116516680
Gene position: 187730-189262 (Clockwise)
Preceding gene: 116515524
Following gene: 116515592
Centisome position: 9.17
GC content: 38.42
Gene sequence:
>1533_bases ATGAAATATAGGAAATTTCAATTATTGATGTCCAAGTATGGCTTTAGTCTTTCGATTATGCTACTTGAACTTTGTCTTGT TTTTGGTCTCTTTCTTTATTTAGGACGCATGGCTCCCATTTTATGGATTACTGTCCTCATTCTACTGAGTATCATCACAA TCATTTCGATAGTCAACCGTAATACGACTCCTGAGAATAAGGTAACCTGGTTGTTAGTAGCCTTTGTGCCAGTATTTGGT CCCTTGCTCTATCTGATGTTTGGTGAAAGGCGATTGTCCAAAAAAGAAATCAAACAACTGAAGAAGCTAGGCTCTATGCA TTTCCAAGAAGCAAATAGCCAGCTACTAAAAGAGAAATTAAAAGAAAGTGACAAGGCAGCTTATGGAGTCATCAAGTCCT TATTGAGTATGGATACCAATGCTGACATCTATGATCAAACTGCCTCTACATTTTTTCCTAACGGAGAAGCTATGTGGAAA AAGATGGTAGAAGATCTTAAAAAGGCTGAGAAATTTATTTTCTTGGAATATTACATTATAGAAGAAGGTTTGATGTGGAA TCGCATACTAGATATACTAGAGCAAAAGGTAGCTCAGGGTGTAGAGGTTAAGATGCTCTATGATGATATCGGCTGTATGG CTACTTTAACAGGAGATTATGCACATCGACTTCGTCAGCTGGGCATCGAGGCCCATAAATTCAATAAAGTTATTCCTCGT TTGACAGTGGCTTATAATAACAGAGATCATAGAAAAATATTGATTGTTGATGGTCAGATAGCCTATACTGGTGGGGTCAA TCTGGCAGATGAGTACATTAACCACGTCGAGAGATTTGGTTATTGGAAGGATAGTGGAATTCGCTTAGACGGACTAGCAG TAAAAGCTCTGACACGCTTATTTTTGACCACTTGGTACATTAATCGAGGAGAAATTAGTGATTTTGATCAATATCATTTA GAAAATCATTCTATCCCGAGTGACGGTTTAACCATTCCATACGGAAGTGGACCCAAGCCAATTTTTCGAGCGCAGGTAGG GAAAAAAGTTTATCAGAGTTTAATCAATCAAGCAACAGAATCGGTCTATATTACGACACCTTATTTGATTATAGATTATG ATTTAACAGAGACAATCAAAAATGCAGCTATGAGAGGGGTCGATGTTCGAATTATCACCCCTTACATACCAGATAAGAAG TTCATTCAGTTAGTCACGAGAGGAGCTTATCCCGACCTTCTTTCTGCTGGTGTTCGGATTTATGAGTATAGTCCAGGTTT TATTCATAGTAAGCAGATGTTGGTAGACGAAGATTTTGCGGTGGTGGGGACAATCAATCTCGACTACCGGAGCTTGGTAC ACCATTATGAAAATGCAGTCTTACTCTATAAAACTCCTTCTATAAGGGAAATCGCCCGAGATTTTCGAAATATATTTGCA GATTCTCAGGAAGTCTATCCTCATTCTATCAAAACGAGCTGGTATCAAAAGCTTGTAAAAGAAATCGCCCAGCTATTCGC CCCTATCTTATAA
Upstream 100 bases:
>100_bases TACCTAGAAAATAATTATAAATACTTGCCTTCTACCGAATACCTGCGTTATACTAGTATCAATTACTTGTTTTTAGCATT CAAACTATCAAGGAGGGGAT
Downstream 100 bases:
>100_bases GAAATCTAGAACTTAGGATACAAACCAGACCTATTTTTCTTGTCTTTTACGAATAGAAAGAAAGAGGAGGGGAATTCATG CTAACTAAGGAAGAAGTGAA
Product: cardiolipin synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MKYRKFQLLMSKYGFSLSIMLLELCLVFGLFLYLGRMAPILWITVLILLSIITIISIVNRNTTPENKVTWLLVAFVPVFG PLLYLMFGERRLSKKEIKQLKKLGSMHFQEANSQLLKEKLKESDKAAYGVIKSLLSMDTNADIYDQTASTFFPNGEAMWK KMVEDLKKAEKFIFLEYYIIEEGLMWNRILDILEQKVAQGVEVKMLYDDIGCMATLTGDYAHRLRQLGIEAHKFNKVIPR LTVAYNNRDHRKILIVDGQIAYTGGVNLADEYINHVERFGYWKDSGIRLDGLAVKALTRLFLTTWYINRGEISDFDQYHL ENHSIPSDGLTIPYGSGPKPIFRAQVGKKVYQSLINQATESVYITTPYLIIDYDLTETIKNAAMRGVDVRIITPYIPDKK FIQLVTRGAYPDLLSAGVRIYEYSPGFIHSKQMLVDEDFAVVGTINLDYRSLVHHYENAVLLYKTPSIREIARDFRNIFA DSQEVYPHSIKTSWYQKLVKEIAQLFAPIL
Sequences:
>Translated_510_residues MKYRKFQLLMSKYGFSLSIMLLELCLVFGLFLYLGRMAPILWITVLILLSIITIISIVNRNTTPENKVTWLLVAFVPVFG PLLYLMFGERRLSKKEIKQLKKLGSMHFQEANSQLLKEKLKESDKAAYGVIKSLLSMDTNADIYDQTASTFFPNGEAMWK KMVEDLKKAEKFIFLEYYIIEEGLMWNRILDILEQKVAQGVEVKMLYDDIGCMATLTGDYAHRLRQLGIEAHKFNKVIPR LTVAYNNRDHRKILIVDGQIAYTGGVNLADEYINHVERFGYWKDSGIRLDGLAVKALTRLFLTTWYINRGEISDFDQYHL ENHSIPSDGLTIPYGSGPKPIFRAQVGKKVYQSLINQATESVYITTPYLIIDYDLTETIKNAAMRGVDVRIITPYIPDKK FIQLVTRGAYPDLLSAGVRIYEYSPGFIHSKQMLVDEDFAVVGTINLDYRSLVHHYENAVLLYKTPSIREIARDFRNIFA DSQEVYPHSIKTSWYQKLVKEIAQLFAPIL >Mature_510_residues MKYRKFQLLMSKYGFSLSIMLLELCLVFGLFLYLGRMAPILWITVLILLSIITIISIVNRNTTPENKVTWLLVAFVPVFG PLLYLMFGERRLSKKEIKQLKKLGSMHFQEANSQLLKEKLKESDKAAYGVIKSLLSMDTNADIYDQTASTFFPNGEAMWK KMVEDLKKAEKFIFLEYYIIEEGLMWNRILDILEQKVAQGVEVKMLYDDIGCMATLTGDYAHRLRQLGIEAHKFNKVIPR LTVAYNNRDHRKILIVDGQIAYTGGVNLADEYINHVERFGYWKDSGIRLDGLAVKALTRLFLTTWYINRGEISDFDQYHL ENHSIPSDGLTIPYGSGPKPIFRAQVGKKVYQSLINQATESVYITTPYLIIDYDLTETIKNAAMRGVDVRIITPYIPDKK FIQLVTRGAYPDLLSAGVRIYEYSPGFIHSKQMLVDEDFAVVGTINLDYRSLVHHYENAVLLYKTPSIREIARDFRNIFA DSQEVYPHSIKTSWYQKLVKEIAQLFAPIL
Specific function: Catalyzes The Reversible Phosphatidyl Group Transfer From One Phosphatidylglycerol Molecule To Another To Form Cardiolipin (Cl) (Diphosphatidylglycerol) And Glycerol. Affects Resistance To The Gyrase Inhibitor Novobiocin. [C]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=452, Percent_Identity=28.3185840707965, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1787007, Length=340, Percent_Identity=26.4705882352941, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 58750; Mature: 58750
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYRKFQLLMSKYGFSLSIMLLELCLVFGLFLYLGRMAPILWITVLILLSIITIISIVNR CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NTTPENKVTWLLVAFVPVFGPLLYLMFGERRLSKKEIKQLKKLGSMHFQEANSQLLKEKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KESDKAAYGVIKSLLSMDTNADIYDQTASTFFPNGEAMWKKMVEDLKKAEKFIFLEYYII HHHHHHHHHHHHHHHHCCCCCCHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEEH EEGLMWNRILDILEQKVAQGVEVKMLYDDIGCMATLTGDYAHRLRQLGIEAHKFNKVIPR HCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHEEECHHHHHHHHHHCCHHHHHHHHHCC LTVAYNNRDHRKILIVDGQIAYTGGVNLADEYINHVERFGYWKDSGIRLDGLAVKALTRL EEEEECCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHH FLTTWYINRGEISDFDQYHLENHSIPSDGLTIPYGSGPKPIFRAQVGKKVYQSLINQATE HHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC SVYITTPYLIIDYDLTETIKNAAMRGVDVRIITPYIPDKKFIQLVTRGAYPDLLSAGVRI CEEEECCEEEEECCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHCCCEE YEYSPGFIHSKQMLVDEDFAVVGTINLDYRSLVHHYENAVLLYKTPSIREIARDFRNIFA EECCCCCEECCHHEECCCEEEEEEECCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHC DSQEVYPHSIKTSWYQKLVKEIAQLFAPIL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKYRKFQLLMSKYGFSLSIMLLELCLVFGLFLYLGRMAPILWITVLILLSIITIISIVNR CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NTTPENKVTWLLVAFVPVFGPLLYLMFGERRLSKKEIKQLKKLGSMHFQEANSQLLKEKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KESDKAAYGVIKSLLSMDTNADIYDQTASTFFPNGEAMWKKMVEDLKKAEKFIFLEYYII HHHHHHHHHHHHHHHHCCCCCCHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEEH EEGLMWNRILDILEQKVAQGVEVKMLYDDIGCMATLTGDYAHRLRQLGIEAHKFNKVIPR HCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHEEECHHHHHHHHHHCCHHHHHHHHHCC LTVAYNNRDHRKILIVDGQIAYTGGVNLADEYINHVERFGYWKDSGIRLDGLAVKALTRL EEEEECCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHH FLTTWYINRGEISDFDQYHLENHSIPSDGLTIPYGSGPKPIFRAQVGKKVYQSLINQATE HHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC SVYITTPYLIIDYDLTETIKNAAMRGVDVRIITPYIPDKKFIQLVTRGAYPDLLSAGVRI CEEEECCEEEEECCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHCCCEE YEYSPGFIHSKQMLVDEDFAVVGTINLDYRSLVHHYENAVLLYKTPSIREIARDFRNIFA EECCCCCEECCHHEECCCEEEEEEECCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHC DSQEVYPHSIKTSWYQKLVKEIAQLFAPIL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12397186; 2761387 [H]