| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515592
Identifier: 116515592
GI number: 116515592
Start: 189520
End: 191058
Strand: Direct
Name: 116515592
Synonym: SPD_0186
Alternate gene names: NA
Gene position: 189520-191058 (Clockwise)
Preceding gene: 116516680
Following gene: 116516887
Centisome position: 9.26
GC content: 40.03
Gene sequence:
>1539_bases ATGAGTGTGTATGGTAGAGTAGAAGAAGTTCATAAGGAGAATCGTGAACCTCTAGAATACCAAATCGAACAAGAATCGCA TCATCGTGAATCAAGTCGTCTTCCTTTGGTGAAAATTTTACTATGGAGTACGCTTGTAACGGGGATAACTCTAGGAGTAC CGCTATTACTCGACTTAATGAGTGCACAAGAAGTGCAGGATTTTTATGCAGGTTGGGCGCTTCATCAGACAGGGAAGATT TACAGCGACTATTATGGAAGTCAAGGTTTGCTTTATTATTTGCTGACTTACGTGAGTCAGGGCGGATTTTTCTTTGCCAT CTTTGAGTGGTTAGCCTTGGTAGCAGGAGGATTTTTCCTTTTTAGATCAGCGGACACCTTGACAGAGCAAGGAGACCAAG CTGGACATCTGGTGACTATTTTTTACATGCTAGTTACAGGTCTTGCTTTTGGTGGAGGCTATGCGACTCTTTTAGCGCTT CCTTTCTTATTCGCAGCCTTTAGTTTAGTTGCGGCTTACCTAAGCAATCCAAGCCATGATAAGGGATTTGTACGGATTGG GCTAGCTTTGGCAGGCGGATTTTTCTTTGCTCCCTTATCATCGCTCCTGTTTATTGCTGTAGTGAGTTTAGGCTTGTTGG TCTTTAACCTTGGGCATAGACGTTTTGTGCATGGGTTTTATCAGTTTCTTGCAGTGGCTTTAGGTTTTTCACTTGTCTTT TATCCAACTGCCTACTATAGTGCTGCAACAGGAAGTTTTGGGGATGCGATTAGTGGTATTCGTTATCCTATTGACAGTAT TCGCTTTGATTTTACTTCTAAAATTTTAGAGAATATGTTTTTTTATGGCTTGTTGTCCCTTGGTTTGGGATTTGTGGTTT GTATCTTTTTAGGTCTCTTTCAATCCAAACCCTTTAAACTATACGTCATTTCGGTTCCTGCAAGTCTTGTGGTAATTTTA GGTTTGATTTTACTTTTCTTTTCACAAGAGCCTCTGCACGCTTCTTATTTGATGGTCGTCTTCCCTGTTTTCCTACTTTT ATTGGTAACCAATATTAAGAGTCAACAGAGGGGGCGTAGTGCTAGAAGAAGCCGAAGAGAAACGCCAGTTAGCCTATGGA GTCGTTTCTTCAAAGGAAATCTATATCTGCTAGTTTTTGGGTTTGTCTATCTTTTGTCTGTTCCTTTTTTGATGAAGTTT GTCCTTTATCCAGTACCTTATCAAGAACGTAATCGTCTTGCTGATTTGGTAAAAGAGGAGACAAATACGGAAGATGCTAT CTATGCATGGGATGATACTGCGACTCTTTATCGTAAGAGTGAGCGCTTGTCGCCATCGGCGATTTTGTCCCCGTTGCACT ATACAGCAACTGAGGAAAATCGTAATAAGTTACTTAATGACTTGAAAGAAAAACAACCTAAGGTGATTGTGGTAAATGAC AAGGTGGTAGTCTGGTCTGAAGTGGAAACACTCTTAAAAGAAAATTACCAACAAGTAAAGACTGATTACTCAGAGTTTAA AGTCTATAAAATTAAATAA
Upstream 100 bases:
>100_bases TGTGAAACTATGCAAAAAATCACTCAAACAGCCATCGCAAGCTGACAATCCTAGGACTTTTTGATATACTAAGACAGATA AATTGAACAGGAGAAACGAT
Downstream 100 bases:
>100_bases CCAAATCAATATCTTGTGTATTTTTAAAAATTTTAGGATTTTTAACACAAGATATTGATTTTTCTTTTTAGAGTGGTATA ATACTTTTTAGAAAGAACAT
Product: competence-induced protein Ccs4
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSVYGRVEEVHKENREPLEYQIEQESHHRESSRLPLVKILLWSTLVTGITLGVPLLLDLMSAQEVQDFYAGWALHQTGKI YSDYYGSQGLLYYLLTYVSQGGFFFAIFEWLALVAGGFFLFRSADTLTEQGDQAGHLVTIFYMLVTGLAFGGGYATLLAL PFLFAAFSLVAAYLSNPSHDKGFVRIGLALAGGFFFAPLSSLLFIAVVSLGLLVFNLGHRRFVHGFYQFLAVALGFSLVF YPTAYYSAATGSFGDAISGIRYPIDSIRFDFTSKILENMFFYGLLSLGLGFVVCIFLGLFQSKPFKLYVISVPASLVVIL GLILLFFSQEPLHASYLMVVFPVFLLLLVTNIKSQQRGRSARRSRRETPVSLWSRFFKGNLYLLVFGFVYLLSVPFLMKF VLYPVPYQERNRLADLVKEETNTEDAIYAWDDTATLYRKSERLSPSAILSPLHYTATEENRNKLLNDLKEKQPKVIVVND KVVVWSEVETLLKENYQQVKTDYSEFKVYKIK
Sequences:
>Translated_512_residues MSVYGRVEEVHKENREPLEYQIEQESHHRESSRLPLVKILLWSTLVTGITLGVPLLLDLMSAQEVQDFYAGWALHQTGKI YSDYYGSQGLLYYLLTYVSQGGFFFAIFEWLALVAGGFFLFRSADTLTEQGDQAGHLVTIFYMLVTGLAFGGGYATLLAL PFLFAAFSLVAAYLSNPSHDKGFVRIGLALAGGFFFAPLSSLLFIAVVSLGLLVFNLGHRRFVHGFYQFLAVALGFSLVF YPTAYYSAATGSFGDAISGIRYPIDSIRFDFTSKILENMFFYGLLSLGLGFVVCIFLGLFQSKPFKLYVISVPASLVVIL GLILLFFSQEPLHASYLMVVFPVFLLLLVTNIKSQQRGRSARRSRRETPVSLWSRFFKGNLYLLVFGFVYLLSVPFLMKF VLYPVPYQERNRLADLVKEETNTEDAIYAWDDTATLYRKSERLSPSAILSPLHYTATEENRNKLLNDLKEKQPKVIVVND KVVVWSEVETLLKENYQQVKTDYSEFKVYKIK >Mature_511_residues SVYGRVEEVHKENREPLEYQIEQESHHRESSRLPLVKILLWSTLVTGITLGVPLLLDLMSAQEVQDFYAGWALHQTGKIY SDYYGSQGLLYYLLTYVSQGGFFFAIFEWLALVAGGFFLFRSADTLTEQGDQAGHLVTIFYMLVTGLAFGGGYATLLALP FLFAAFSLVAAYLSNPSHDKGFVRIGLALAGGFFFAPLSSLLFIAVVSLGLLVFNLGHRRFVHGFYQFLAVALGFSLVFY PTAYYSAATGSFGDAISGIRYPIDSIRFDFTSKILENMFFYGLLSLGLGFVVCIFLGLFQSKPFKLYVISVPASLVVILG LILLFFSQEPLHASYLMVVFPVFLLLLVTNIKSQQRGRSARRSRRETPVSLWSRFFKGNLYLLVFGFVYLLSVPFLMKFV LYPVPYQERNRLADLVKEETNTEDAIYAWDDTATLYRKSERLSPSAILSPLHYTATEENRNKLLNDLKEKQPKVIVVNDK VVVWSEVETLLKENYQQVKTDYSEFKVYKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58027; Mature: 57896
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVYGRVEEVHKENREPLEYQIEQESHHRESSRLPLVKILLWSTLVTGITLGVPLLLDLM CCCCHHHHHHHHCCCCCCCEEECHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SAQEVQDFYAGWALHQTGKIYSDYYGSQGLLYYLLTYVSQGGFFFAIFEWLALVAGGFFL HHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHH FRSADTLTEQGDQAGHLVTIFYMLVTGLAFGGGYATLLALPFLFAAFSLVAAYLSNPSHD HHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC KGFVRIGLALAGGFFFAPLSSLLFIAVVSLGLLVFNLGHRRFVHGFYQFLAVALGFSLVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH YPTAYYSAATGSFGDAISGIRYPIDSIRFDFTSKILENMFFYGLLSLGLGFVVCIFLGLF HHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSKPFKLYVISVPASLVVILGLILLFFSQEPLHASYLMVVFPVFLLLLVTNIKSQQRGRS CCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRSRRETPVSLWSRFFKGNLYLLVFGFVYLLSVPFLMKFVLYPVPYQERNRLADLVKEE HHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC TNTEDAIYAWDDTATLYRKSERLSPSAILSPLHYTATEENRNKLLNDLKEKQPKVIVVND CCCCCCEEEECCHHHHHHHHHCCCHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCEEEECC KVVVWSEVETLLKENYQQVKTDYSEFKVYKIK CEEEHHHHHHHHHHHHHHHHCCHHHCEEEEEC >Mature Secondary Structure SVYGRVEEVHKENREPLEYQIEQESHHRESSRLPLVKILLWSTLVTGITLGVPLLLDLM CCCHHHHHHHHCCCCCCCEEECHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SAQEVQDFYAGWALHQTGKIYSDYYGSQGLLYYLLTYVSQGGFFFAIFEWLALVAGGFFL HHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHH FRSADTLTEQGDQAGHLVTIFYMLVTGLAFGGGYATLLALPFLFAAFSLVAAYLSNPSHD HHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC KGFVRIGLALAGGFFFAPLSSLLFIAVVSLGLLVFNLGHRRFVHGFYQFLAVALGFSLVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH YPTAYYSAATGSFGDAISGIRYPIDSIRFDFTSKILENMFFYGLLSLGLGFVVCIFLGLF HHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSKPFKLYVISVPASLVVILGLILLFFSQEPLHASYLMVVFPVFLLLLVTNIKSQQRGRS CCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRSRRETPVSLWSRFFKGNLYLLVFGFVYLLSVPFLMKFVLYPVPYQERNRLADLVKEE HHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC TNTEDAIYAWDDTATLYRKSERLSPSAILSPLHYTATEENRNKLLNDLKEKQPKVIVVND CCCCCCEEEECCHHHHHHHHHCCCHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCEEEECC KVVVWSEVETLLKENYQQVKTDYSEFKVYKIK CEEEHHHHHHHHHHHHHHHHCCHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA