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The map label for this gene is trxB [C]

Identifier: 116516331

GI number: 116516331

Start: 1414145

End: 1415113

Strand: Direct

Name: trxB [C]

Synonym: SPD_1393

Alternate gene names: 116516331

Gene position: 1414145-1415113 (Clockwise)

Preceding gene: 116517171

Following gene: 116515420

Centisome position: 69.11

GC content: 44.69

Gene sequence:

>969_bases
ATGTCTCAACTCTATGATATTACCATTGTGGGTGGTGGTCCTGTCGGGCTTTTTGCAGCCTTTTATGCCCACCTACGCCA
AGCCAAGGTTCAAATCATCGACTCTCTTCCCCAGCTAGGTGGACAACCTGCTATTCTCTACCCTGAAAAGGAAATCCTAG
ACGTACCAGGCTTCCCAAACCTGACTGGAGAAGAGTTGACTAACCGCTTGATTGAACAGCTAAATGGATTTGATACCCCT
ATTCATCTCAATGAAACGGTTCTTGAGATTGACAAACAAGAAGAAGAATTTGCCATCACAACTTCCAAAGGAAGTCACCT
GACTAAAACAGTTATCATCGCTATGGGTGGCGGTGCCTTCAAACCACGTCCGCTGGAACTTGAAGGGGTTGAGGACTATG
AAAATATCCACTACCACGTTTCTAACATTCAGCAATACGCTGGTAAGAAAGTGACGATTCTTGGTGGGGGAGACTCGGCT
GTGGATTGGGCTTTGGCTTTTGAAAAAATCGCACCAACTACCCTTGTTCACCGCAGAGATAATTTCCGTGCCTTGGAACA
CAGTGTTCAAGCCTTGCAAGAATCATCTGTAACCATCAAGACACCATTCGCCCCTAGCCAACTCCTTGGAGATGGAAAAA
CGCTTGATAAACTTGAAATCACAAAAGTCAAATCTGATGAAACTGAAACCATTGACCTAGACCACCTCTTTGTCAACTAT
GGTTTCAAATCTTCTGTCGGTAACCTTAAAAACTGGGGGCTCGACCTCAACCGTCACAAGATTATCGTCAACAGCAAACA
AGAATCCAGCCAAGCAGGTATCTATGCTATCGGTGACTGCTGCTACTATGACGGAAAAATTGATCTGATTGCGACAGGTC
TAGGGGAAGCTCCAACTGCTGTCAACAACGCTATCAACTACATTGACCCTGAACAAAAAGTACAACCAAAACACTCTACC
AGTTTATAA

Upstream 100 bases:

>100_bases
ATTATACCATTTTCTGGCATTTTTTTCCCTATCCTAGTCCATTTTACATTGAACAAAAATATGATAAAATAAACTGACTA
GAAAAAACAAAGGAGAAACT

Downstream 100 bases:

>100_bases
AAAAGAACCACGAGTCACATAGGATTCGTGGTTTTATAATTCATCCGCTATCTTATTGATTTTTCTGAGTCTGTGATTGA
CACCACTTTTGGTCAGAGGG

Product: pyridine nucleotide-disulphide oxidoreductase family protein

Products: NA

Alternate protein names: FNR; Fd-NADP+ reductase

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPNLTGEELTNRLIEQLNGFDTP
IHLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAFKPRPLELEGVEDYENIHYHVSNIQQYAGKKVTILGGGDSA
VDWALAFEKIAPTTLVHRRDNFRALEHSVQALQESSVTIKTPFAPSQLLGDGKTLDKLEITKVKSDETETIDLDHLFVNY
GFKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTAVNNAINYIDPEQKVQPKHST
SL

Sequences:

>Translated_322_residues
MSQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPNLTGEELTNRLIEQLNGFDTP
IHLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAFKPRPLELEGVEDYENIHYHVSNIQQYAGKKVTILGGGDSA
VDWALAFEKIAPTTLVHRRDNFRALEHSVQALQESSVTIKTPFAPSQLLGDGKTLDKLEITKVKSDETETIDLDHLFVNY
GFKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTAVNNAINYIDPEQKVQPKHST
SL
>Mature_321_residues
SQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPNLTGEELTNRLIEQLNGFDTPI
HLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAFKPRPLELEGVEDYENIHYHVSNIQQYAGKKVTILGGGDSAV
DWALAFEKIAPTTLVHRRDNFRALEHSVQALQESSVTIKTPFAPSQLLGDGKTLDKLEITKVKSDETETIDLDHLFVNYG
FKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTAVNNAINYIDPEQKVQPKHSTS
L

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family

Homologues:

Organism=Escherichia coli, GI1787114, Length=322, Percent_Identity=29.1925465838509, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320560, Length=321, Percent_Identity=27.7258566978193, Blast_Score=73, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6321898, Length=327, Percent_Identity=27.217125382263, Blast_Score=73, Evalue=7e-14,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): FENR_STRP2 (Q04JI5)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816853.1
- ProteinModelPortal:   Q04JI5
- SMR:   Q04JI5
- STRING:   Q04JI5
- EnsemblBacteria:   EBSTRT00000018945
- GeneID:   4442814
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_1393
- eggNOG:   COG0492
- GeneTree:   EBGT00050000027206
- HOGENOM:   HBG669726
- OMA:   FQVFELG
- ProtClustDB:   CLSK884118
- HAMAP:   MF_01685
- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR001327
- InterPro:   IPR000103
- PRINTS:   PR00368
- PRINTS:   PR00469

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2

EC number: =1.18.1.2

Molecular weight: Translated: 35329; Mature: 35198

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS01128 SHIKIMATE_KINASE

Important sites: BINDING 34-34 BINDING 42-42 BINDING 47-47 BINDING 87-87 BINDING 120-120 BINDING 279-279 BINDING 320-320

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPN
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHEECCCCCC
LTGEELTNRLIEQLNGFDTPIHLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAF
CCHHHHHHHHHHHHCCCCCCEECCCHHEEECCCCCEEEEEECCCCCEEEEEEEEECCCCC
KPRPLELEGVEDYENIHYHVSNIQQYAGKKVTILGGGDSAVDWALAFEKIAPTTLVHRRD
CCCCEEECCCCCHHHHHEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHEEECCC
NFRALEHSVQALQESSVTIKTPFAPSQLLGDGKTLDKLEITKVKSDETETIDLDHLFVNY
CHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEEEEC
GFKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTA
CCHHCCCCHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCHH
VNNAINYIDPEQKVQPKHSTSL
HHHHHCCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
SQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPN
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHEECCCCCC
LTGEELTNRLIEQLNGFDTPIHLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAF
CCHHHHHHHHHHHHCCCCCCEECCCHHEEECCCCCEEEEEECCCCCEEEEEEEEECCCCC
KPRPLELEGVEDYENIHYHVSNIQQYAGKKVTILGGGDSAVDWALAFEKIAPTTLVHRRD
CCCCEEECCCCCHHHHHEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHEEECCC
NFRALEHSVQALQESSVTIKTPFAPSQLLGDGKTLDKLEITKVKSDETETIDLDHLFVNY
CHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEEEEC
GFKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTA
CCHHCCCCHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCHH
VNNAINYIDPEQKVQPKHSTSL
HHHHHCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA