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The map label for this gene is yurR [H]

Identifier: 116516255

GI number: 116516255

Start: 1449578

End: 1450681

Strand: Reverse

Name: yurR [H]

Synonym: SPD_1433

Alternate gene names: 116516255

Gene position: 1450681-1449578 (Counterclockwise)

Preceding gene: 116517031

Following gene: 116516336

Centisome position: 70.9

GC content: 45.92

Gene sequence:

>1104_bases
ATGAAAAAAGTTGTCATTATTGGAGCAGGAATTGTGGGAGCAACAGCTGCCTACTACCTCTCGAGAGAAAGTGACCTAGA
GGTGACCGTTTTTGACCATGAGCAAGGTCAAGCCACCAAGGCCGCAGCAGGAATTATCAGTCCTTGGTTTTCCAAACGCC
GTAATAAAGCCTGGTACAAGATGGCGCGCTTGGGGGCTGATTTTTATGTGGATTTATTAGCTGATTTAGAGAAATCAGGA
CAAAAAATCGACTTTTACCAGCGTTCGGGAGTCTTTCTCTTGAAAAAGGATGAATCCAAGTTGGAAGAACTTTATCAACT
GGCCCTCCAGCGCAGAGAAGAATCTCCCTTGATAGGGCAATTAGCCATTCTGGACCAAGCTTCAGCTAATGAATTATTCC
CTGGTTTGCAGGGATTTGACCGCCTGCTCTATGCTTCTGGTGGAGCGAGAGTAGATGGCCAACTCTTGGTAACTCGTCTG
CTAGAAGCCAGTCATGTCAAGCTGGTCAAAGAAAAAGTGACTCTGACACTCTTATCATCAGGCTACCAGATTGGCGAAGA
GGTGTTTGATCAGGTTATTTTGGCAACGGGAGCTTGGTTGGGGGACATGTTAGAGCCTTTAGGTTATGAAGTGGATGTCC
GTCCTCAAAAAGGACAACTACGAGATTATCAGCTTGCCCAAGACATGGAAGATTACCCTGTTGTCATGCCAGAAGGGGAG
TGGGATTTGATTCCTTTTGCAGGTGGGAAATTGTCCTTAGGCGCTACCCACGAAAATGACATGGGATTTGATTTGACGGT
AGATGAAACCTTGCTCCAACAAATGGAGGAGGCCACCTTGACTCACTATCTGATTTTGGCTGAAGCTACTTCAAAATCTG
AGCGTGTTGGAATCCGTGCCTACACCAGTGATTTCTCTCCTTTCTTTGGGCAGGTGCCTGGCTTAACTGGTGTCTATGCA
GCCAGTGGACTAGGTTCATCAGGCCTCACAACTGGTCCTATTATTGGTTACCATTTAGCTCAACTGATCCAAGACAAGGA
GTTGACCTTGGACCCTGAAAACTACCCAATTGAAAACTATGTCAAACGAGTAAAAAGCGAATAA

Upstream 100 bases:

>100_bases
CTTACTCAATGGAAAGAGAAAAAAGGCTGGGAACTAGAGATTTTACCTAGTCAAGCATCGACCAATCCTTTCCGTCATAT
CTAGTTAGAAAGTGAAGACA

Downstream 100 bases:

>100_bases
TACTCAATGAAAATCAAAGAACAAACTAGGTAACTAGCCGCGGGTTACTCAAAGCACTGCTTTGAGGTTGTGGATAGAAC
TGACGAAGTCAGCTCAAAAC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKKVVIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYKMARLGADFYVDLLADLEKSG
QKIDFYQRSGVFLLKKDESKLEELYQLALQRREESPLIGQLAILDQASANELFPGLQGFDRLLYASGGARVDGQLLVTRL
LEASHVKLVKEKVTLTLLSSGYQIGEEVFDQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQDMEDYPVVMPEGE
WDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIRAYTSDFSPFFGQVPGLTGVYA
ASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPENYPIENYVKRVKSE

Sequences:

>Translated_367_residues
MKKVVIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYKMARLGADFYVDLLADLEKSG
QKIDFYQRSGVFLLKKDESKLEELYQLALQRREESPLIGQLAILDQASANELFPGLQGFDRLLYASGGARVDGQLLVTRL
LEASHVKLVKEKVTLTLLSSGYQIGEEVFDQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQDMEDYPVVMPEGE
WDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIRAYTSDFSPFFGQVPGLTGVYA
ASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPENYPIENYVKRVKSE
>Mature_367_residues
MKKVVIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYKMARLGADFYVDLLADLEKSG
QKIDFYQRSGVFLLKKDESKLEELYQLALQRREESPLIGQLAILDQASANELFPGLQGFDRLLYASGGARVDGQLLVTRL
LEASHVKLVKEKVTLTLLSSGYQIGEEVFDQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQDMEDYPVVMPEGE
WDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIRAYTSDFSPFFGQVPGLTGVYA
ASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPENYPIENYVKRVKSE

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 40603; Mature: 40603

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVVIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYK
CCEEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHH
MARLGADFYVDLLADLEKSGQKIDFYQRSGVFLLKKDESKLEELYQLALQRREESPLIGQ
HHHHCHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEE
LAILDQASANELFPGLQGFDRLLYASGGARVDGQLLVTRLLEASHVKLVKEKVTLTLLSS
EEEECCCCCHHHCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHC
GYQIGEEVFDQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQDMEDYPVVMPEGE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCEEECCCC
WDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIRA
EEEEEECCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEE
YTSDFSPFFGQVPGLTGVYAASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPENYPIENY
ECCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCHHHH
VKRVKSE
HHHHHCC
>Mature Secondary Structure
MKKVVIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYK
CCEEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHH
MARLGADFYVDLLADLEKSGQKIDFYQRSGVFLLKKDESKLEELYQLALQRREESPLIGQ
HHHHCHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEE
LAILDQASANELFPGLQGFDRLLYASGGARVDGQLLVTRLLEASHVKLVKEKVTLTLLSS
EEEECCCCCHHHCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHC
GYQIGEEVFDQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQDMEDYPVVMPEGE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCEEECCCC
WDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIRA
EEEEEECCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEE
YTSDFSPFFGQVPGLTGVYAASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPENYPIENY
ECCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCHHHH
VKRVKSE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]