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The map label for this gene is pppA [C]

Identifier: 116516208

GI number: 116516208

Start: 1609163

End: 1609822

Strand: Direct

Name: pppA [C]

Synonym: SPD_1593

Alternate gene names: 116516208

Gene position: 1609163-1609822 (Clockwise)

Preceding gene: 116515903

Following gene: 116517214

Centisome position: 78.64

GC content: 44.85

Gene sequence:

>660_bases
ATGATTGATTTTTATTTTTTTCTCGTCGGGAGCATTCTAGCTTCCTTTCTTGGTTTGGTCATTGACCGTTTTCCAGAGCA
ATCCATTATCAGTTCAGCCAGTCACTGCGATTCCTGTCAGACTCGCTTGCGTCCCTTAGATTTGATTCCGATTCTCTCAC
AGGTCTTCAATCGCTTTTGCTGTCGCTACTGCAAGGTCCGCTATCCTGTCTGGTATGCCCTCTTTGAACTAGGCTTAGGA
CTCCTCTTTCTGCTTTACTCTTGGGAATTACTTTCCTTGAGTCAAGTCATCCTAATCACTGCTGGTTTGACCTTGGGCAT
CTACGACTTTCGCCATCAGGAATATCCCTTACTGGTCTGGATGACTTTCCACCTAATCCTAATAGCTTCCTCTGGCTGGA
ATCTGGTCATGGTCTCCTTCCTCATACTTGGAATTTTGGCTCATTTTATCGATATCCGCATGGGTGCAGGGGATTTCCTT
TTTTTAGCTTCTTGCGCTCTCGTCTTTAGCGTAACGGAGTTACTGATCTTGATTCAGTTCGCTTCTGCGACGGGTATCCT
GGCCTTTCTCCTGCAAAAGAAAAAGGAAAGACTTCCTTTCGTGCCTTTCCTCTTACTTGCTGCTTGTGTGATTATTTTTG
GTAAGCTACTGCTTGTTTGA

Upstream 100 bases:

>100_bases
TGCTCACCTTTTCTTCAAAACGAATTGTCATCTTTTCCTCACCACCTTATCTATGTTTCTCCATTATACTATTTCTCCCA
TTTTTTACGAATAGATAAGT

Downstream 100 bases:

>100_bases
TAAAGTCCAATTTCTGCCATATGTCCTTCATGAAATTATTTCACAGTTAAATTATAAATTATTTCTTTTGTACAAAGGGA
TGATGTTATCAAATCGATCT

Product: type IV prepilin peptidase

Products: NA

Alternate protein names: Signal Peptidase Type IV; Type 4 Prepilin Peptidase; Type IV Leader Peptidase Family Protein; Peptidase; Prepilin Peptidase; Prepilin Peptidase Type IV; Type IV Prepilin Peptidase-Related Protein; Type 4 Prepilin-Like Protein Specific Leader Peptidase; Type IV Prepilin Leader Peptidase PilD; Aspartic Endopeptidase; Type IV Prepilin Leader Peptidase; Type II Secretory Pathway Prepilin Signal Peptidase; Type 4 Prepilin-Like Proteins Leader Peptide Processing; Type Iv Prepilin Peptidase

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MIDFYFFLVGSILASFLGLVIDRFPEQSIISSASHCDSCQTRLRPLDLIPILSQVFNRFCCRYCKVRYPVWYALFELGLG
LLFLLYSWELLSLSQVILITAGLTLGIYDFRHQEYPLLVWMTFHLILIASSGWNLVMVSFLILGILAHFIDIRMGAGDFL
FLASCALVFSVTELLILIQFASATGILAFLLQKKKERLPFVPFLLLAACVIIFGKLLLV

Sequences:

>Translated_219_residues
MIDFYFFLVGSILASFLGLVIDRFPEQSIISSASHCDSCQTRLRPLDLIPILSQVFNRFCCRYCKVRYPVWYALFELGLG
LLFLLYSWELLSLSQVILITAGLTLGIYDFRHQEYPLLVWMTFHLILIASSGWNLVMVSFLILGILAHFIDIRMGAGDFL
FLASCALVFSVTELLILIQFASATGILAFLLQKKKERLPFVPFLLLAACVIIFGKLLLV
>Mature_219_residues
MIDFYFFLVGSILASFLGLVIDRFPEQSIISSASHCDSCQTRLRPLDLIPILSQVFNRFCCRYCKVRYPVWYALFELGLG
LLFLLYSWELLSLSQVILITAGLTLGIYDFRHQEYPLLVWMTFHLILIASSGWNLVMVSFLILGILAHFIDIRMGAGDFL
FLASCALVFSVTELLILIQFASATGILAFLLQKKKERLPFVPFLLLAACVIIFGKLLLV

Specific function: Unknown

COG id: COG1989

COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.23.43; 2.1.1.-

Molecular weight: Translated: 24846; Mature: 24846

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFYFFLVGSILASFLGLVIDRFPEQSIISSASHCDSCQTRLRPLDLIPILSQVFNRFC
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
CRYCKVRYPVWYALFELGLGLLFLLYSWELLSLSQVILITAGLTLGIYDFRHQEYPLLVW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
MTFHLILIASSGWNLVMVSFLILGILAHFIDIRMGAGDFLFLASCALVFSVTELLILIQF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASATGILAFLLQKKKERLPFVPFLLLAACVIIFGKLLLV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDFYFFLVGSILASFLGLVIDRFPEQSIISSASHCDSCQTRLRPLDLIPILSQVFNRFC
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
CRYCKVRYPVWYALFELGLGLLFLLYSWELLSLSQVILITAGLTLGIYDFRHQEYPLLVW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
MTFHLILIASSGWNLVMVSFLILGILAHFIDIRMGAGDFLFLASCALVFSVTELLILIQF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASATGILAFLLQKKKERLPFVPFLLLAACVIIFGKLLLV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA