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The map label for this gene is 116515903

Identifier: 116515903

GI number: 116515903

Start: 1607917

End: 1608120

Strand: Direct

Name: 116515903

Synonym: SPD_1591

Alternate gene names: NA

Gene position: 1607917-1608120 (Clockwise)

Preceding gene: 116515908

Following gene: 116516208

Centisome position: 78.58

GC content: 36.76

Gene sequence:

>204_bases
ATGTCAGTAGAAGAAAAATTAAATCAAGCTAAAGGTTCTATTAAAGAAGGTGTTGGGAAAGCCATCGGTGATGAAAAAAT
GGAAAAAGAAGGAGCAGCTGAAAAAGTTGTTTCTAAAGTAAAAGAAGTTGCCGAAGACGCTAAAGACGCTGTAGAAGGTG
CTGTAGAAGGTGTTAAAAACATGTTGAGTGGCGACGATAAATAA

Upstream 100 bases:

>100_bases
CGAAGGTGTAGAAGCTGTTAAAGGTGCAGCAAATGGTGTAGTATCTCACGAAAACACTCGTGTAAACTAAGATAAAATAA
ATATAACAGGAGAAATTATC

Downstream 100 bases:

>100_bases
GGTTAAAAGTTACTTTATCTTTTTGGTAACATTAGTCAAAAGAGTCTGAGTCAAGATGATTCTCAGAAAACAAAAAGCTA
GAGATTCCCAATTGCGGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MSVEEKLNQAKGSIKEGVGKAIGDEKMEKEGAAEKVVSKVKEVAEDAKDAVEGAVEGVKNMLSGDDK

Sequences:

>Translated_67_residues
MSVEEKLNQAKGSIKEGVGKAIGDEKMEKEGAAEKVVSKVKEVAEDAKDAVEGAVEGVKNMLSGDDK
>Mature_66_residues
SVEEKLNQAKGSIKEGVGKAIGDEKMEKEGAAEKVVSKVKEVAEDAKDAVEGAVEGVKNMLSGDDK

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1626_STRR6 (Q8CYD7)

Other databases:

- EMBL:   AE007317
- PIR:   H98074
- RefSeq:   NP_359218.1
- ProteinModelPortal:   Q8CYD7
- SMR:   Q8CYD7
- STRING:   Q8CYD7
- EnsemblBacteria:   EBSTRT00000015464
- GeneID:   933216
- GenomeReviews:   AE007317_GR
- KEGG:   spr:spr1626
- eggNOG:   COG3237
- GeneTree:   EBGT00050000027792
- HOGENOM:   HBG704474
- OMA:   MSTEEKF
- ProtClustDB:   CLSK884160
- BioCyc:   SPNE171101:SPR1626-MONOMER
- InterPro:   IPR008462
- Gene3D:   G3DSA:1.10.1470.10

Pfam domain/function: PF05532 CsbD; SSF69047 CsbD

EC number: NA

Molecular weight: Translated: 7020; Mature: 6889

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEEKLNQAKGSIKEGVGKAIGDEKMEKEGAAEKVVSKVKEVAEDAKDAVEGAVEGVKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLSGDDK
HHCCCCC
>Mature Secondary Structure 
SVEEKLNQAKGSIKEGVGKAIGDEKMEKEGAAEKVVSKVKEVAEDAKDAVEGAVEGVKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLSGDDK
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234