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The map label for this gene is yhfC [H]

Identifier: 116516196

GI number: 116516196

Start: 1255220

End: 1255972

Strand: Reverse

Name: yhfC [H]

Synonym: SPD_1223

Alternate gene names: 116516196

Gene position: 1255972-1255220 (Counterclockwise)

Preceding gene: 116516826

Following gene: 116515736

Centisome position: 61.38

GC content: 41.17

Gene sequence:

>753_bases
ATGACCATTCATATCATTATTACCATGTTGCTGTTGCTAGCTTTTCTGATAGGAAGCATTTGGTTTGCCAAAAAGAAATA
CCAGATTAATCTAGCTGTCTTGGGCTTGGGTGCAGTCGCTTTCTTTGTCTCTTCGCAGATTTTGGAAAAACTGGTGCATA
TCTTGATTTTGCATCCTCAAAAAGACGGTAGTATTGCCCTCTTGCAAGATCATCCGCTTATCTATATTATCTATGGCCTA
GCCATGGCAGCATTTTTTGAGGAAACGGCTCGTCTTGTTTTCTTCAAATGGTTGGAGAAAAAGAGAAGTTTGGAAAAGGC
AGATGCCTTGGCCTATGGCCTAGGGCATGGTGGCTTGGAGTTGATTTTTCTAGGCCTTATTAGTTTACTCAATCTTTACA
TCGTTCTTTCGGCAGTTCAAACTCAGAATCCACAGGTTATGCAATTACTGTCTGAAAATATGTTAAAAACCATTCAGTCA
CTTTCGGTCTGGCAGATTTATTTGCTTGGTTTTGAGCGAATCTTGGCGCTTGGTTTCCAATTACTTTTGACAGTTTGGGT
TTACCAAGCTGTTCGCCAGAAGAAATGGATTTATCTCCTAGCAGCCTATGGCTTGCATGCCTTCTTTGATCTGGCACCAT
CTCTTTTCCAAGTAGGCTGGTTGACAAATCCAGTCTTGGTTGAAGTGATTCTAGCACTGGAGCTCGTTCTGGTCGCCTAT
GGAACCAAGGAAATCTTTTGTAAAAAATCATAA

Upstream 100 bases:

>100_bases
GGACCAACGTTTCCCAGTCCAAGACCGTCAATACTTGTTTGCTAAGTTCAATGTTGACGAGATGAAAAAAGATATTGAAA
AGGCAGAATAGGAGAAGAAA

Downstream 100 bases:

>100_bases
AAAGGGGGGAACCTCTTTTTCTTATGCAAAATCCAAACAAGGTATTTTTATGGTCGTCAAATGTCTCTAAAAATGGTATA
ATGGAATGAATTTTGTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTIHIIITMLLLLAFLIGSIWFAKKKYQINLAVLGLGAVAFFVSSQILEKLVHILILHPQKDGSIALLQDHPLIYIIYGL
AMAAFFEETARLVFFKWLEKKRSLEKADALAYGLGHGGLELIFLGLISLLNLYIVLSAVQTQNPQVMQLLSENMLKTIQS
LSVWQIYLLGFERILALGFQLLLTVWVYQAVRQKKWIYLLAAYGLHAFFDLAPSLFQVGWLTNPVLVEVILALELVLVAY
GTKEIFCKKS

Sequences:

>Translated_250_residues
MTIHIIITMLLLLAFLIGSIWFAKKKYQINLAVLGLGAVAFFVSSQILEKLVHILILHPQKDGSIALLQDHPLIYIIYGL
AMAAFFEETARLVFFKWLEKKRSLEKADALAYGLGHGGLELIFLGLISLLNLYIVLSAVQTQNPQVMQLLSENMLKTIQS
LSVWQIYLLGFERILALGFQLLLTVWVYQAVRQKKWIYLLAAYGLHAFFDLAPSLFQVGWLTNPVLVEVILALELVLVAY
GTKEIFCKKS
>Mature_249_residues
TIHIIITMLLLLAFLIGSIWFAKKKYQINLAVLGLGAVAFFVSSQILEKLVHILILHPQKDGSIALLQDHPLIYIIYGLA
MAAFFEETARLVFFKWLEKKRSLEKADALAYGLGHGGLELIFLGLISLLNLYIVLSAVQTQNPQVMQLLSENMLKTIQSL
SVWQIYLLGFERILALGFQLLLTVWVYQAVRQKKWIYLLAAYGLHAFFDLAPSLFQVGWLTNPVLVEVILALELVLVAYG
TKEIFCKKS

Specific function: Unknown

COG id: COG4377

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011397 [H]

Pfam domain/function: PF10086 DUF2324 [H]

EC number: NA

Molecular weight: Translated: 28267; Mature: 28135

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHIIITMLLLLAFLIGSIWFAKKKYQINLAVLGLGAVAFFVSSQILEKLVHILILHPQ
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCC
KDGSIALLQDHPLIYIIYGLAMAAFFEETARLVFFKWLEKKRSLEKADALAYGLGHGGLE
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LIFLGLISLLNLYIVLSAVQTQNPQVMQLLSENMLKTIQSLSVWQIYLLGFERILALGFQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLTVWVYQAVRQKKWIYLLAAYGLHAFFDLAPSLFQVGWLTNPVLVEVILALELVLVAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GTKEIFCKKS
CCHHHEEECC
>Mature Secondary Structure 
TIHIIITMLLLLAFLIGSIWFAKKKYQINLAVLGLGAVAFFVSSQILEKLVHILILHPQ
CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCC
KDGSIALLQDHPLIYIIYGLAMAAFFEETARLVFFKWLEKKRSLEKADALAYGLGHGGLE
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LIFLGLISLLNLYIVLSAVQTQNPQVMQLLSENMLKTIQSLSVWQIYLLGFERILALGFQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLTVWVYQAVRQKKWIYLLAAYGLHAFFDLAPSLFQVGWLTNPVLVEVILALELVLVAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GTKEIFCKKS
CCHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]