| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516118
Identifier: 116516118
GI number: 116516118
Start: 1871024
End: 1871233
Strand: Direct
Name: 116516118
Synonym: SPD_1901
Alternate gene names: NA
Gene position: 1871024-1871233 (Clockwise)
Preceding gene: 116515894
Following gene: 116516539
Centisome position: 91.44
GC content: 43.81
Gene sequence:
>210_bases ATGGCTGAGTTAAATTCGGTCATCACGACGGTTACTGGGATTGGGAATCGTTTAGGGGCGGTCATTTTAGCCGAGATTCA AAATATTCATGCCTTTGATAATCCTGCTCAATTACAAGCTTTCGCTGGACTGGATTCTTCTATTTATCAGTCAGGTCAGA TTGATTTAGCTGGAAGAATGATCAAACGGGGTTCCCCTCATCTGCGGTAG
Upstream 100 bases:
>100_bases AATGAGTTTGATAACGCATAGACGTTTTATCTCGTGTAATGAAAACATCAAACATTACAAGAGGCTCATTGACAAGGCGG AAAAATGTGTCAATGACTTG
Downstream 100 bases:
>100_bases GCACTCATACAAGCTGCCAAAGCATGCGCTCGCTTTTCACCTGCTTTTAAGGCCTATCTTAAGACTAAGTTAGAATAAGG AAAACATTACAATGTAGCCA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MAELNSVITTVTGIGNRLGAVILAEIQNIHAFDNPAQLQAFAGLDSSIYQSGQIDLAGRMIKRGSPHLR
Sequences:
>Translated_69_residues MAELNSVITTVTGIGNRLGAVILAEIQNIHAFDNPAQLQAFAGLDSSIYQSGQIDLAGRMIKRGSPHLR >Mature_68_residues AELNSVITTVTGIGNRLGAVILAEIQNIHAFDNPAQLQAFAGLDSSIYQSGQIDLAGRMIKRGSPHLR
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7362; Mature: 7230
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELNSVITTVTGIGNRLGAVILAEIQNIHAFDNPAQLQAFAGLDSSIYQSGQIDLAGRM CCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCCHHHHH IKRGSPHLR HHCCCCCCC >Mature Secondary Structure AELNSVITTVTGIGNRLGAVILAEIQNIHAFDNPAQLQAFAGLDSSIYQSGQIDLAGRM CCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCCHHHHH IKRGSPHLR HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA