Definition Streptococcus pneumoniae D39, complete genome.
Accession NC_008533
Length 2,046,115

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The map label for this gene is 116515902

Identifier: 116515902

GI number: 116515902

Start: 1944416

End: 1946500

Strand: Direct

Name: 116515902

Synonym: SPD_1973

Alternate gene names: NA

Gene position: 1944416-1946500 (Clockwise)

Preceding gene: 116515349

Following gene: 116516173

Centisome position: 95.03

GC content: 46.81

Gene sequence:

>2085_bases
ATGAAACCACTACTTGAAACCATCGATACCCGCTTTGGTACTGCTAGCAAGCATGCCTTCTCTCGGGGAAATACCCTGCC
ATACACAGGCGTGCCTTTTGGGATGAATTACTTTGTGCCCCAGACCAGTGACCAGGATGGATCTTGGTTTTTTGATCCGC
ATCTGCCTATCTTTCAGGGGATTCGATTAACTCACCAGCCCAGTCCTTGGATTGGGGACTACTCTTGGCTCCTTCTGACA
CCTGTCACCAGTCAACTGGGGGGAGACAGCCTCTTTCACCGCCAGTCTTCTTATGATATAGATAAAGCTTGCTTCCAGCC
TCACTATTTGAAGCTCTTTTCTCTGCGTTATCAGATTGAAACCCAGCTCACACCGACTTGCTATGGTGCTTCTATTCGTT
TGAAGCAAAAGCAAGGCAAAGCCCTCTCCCTCTATCTTCACGCAGCAGATGAACTGACAGTAGAGCAAGTAGATAAGCGG
ACTCTTGCCCTGCGACAAGAAGGTAAAACTGAAACTAACAAAAATTCGCTAACGATGTTCACTGCCCTGCAAATGAACAC
GGATATTCTTGCTATCAGCCAAGAAGCTGGGGACTGGCGAATTGACTTAGCAAGTAGTCAAACCGAGATGCAACTAGCCA
CTTCTTTCATCTCTCCTTCTCAAGCTCTAATCAATCTACCTCAAGAAGATTTTGATAGCTGTAAAACAAGTGCCCAAGCG
GATTGGGAAAATCTCCTCCATCGTTTTGACATTATAGAGACAGGAGAGGCTGACCGAACCTTCTTTGACCACTGCCTCTA
CAGACTCTTCCTCTTCCCACAGACTTTTTATGAGGTTGATGAGTCAGGGAAAGCCATCCACATGGATCTGGCTACTGGTA
CTGTCAAGCCTGGTGTCCTCTTTAGCAACAATGGTTTCTGGGATACCTTCCGCACCACCTTCCCCCTCTTTGCCCTTATC
ATACCTGAGCACTATCAACGCTTTTTAGAAGGTTTCCTCAATAGCTACCGCGATACTGGTTTCCTTCCAAAATGGCTGGC
TCCAGATGAACGGGGTATGATGCCAGGTACACTGCTAGATGGCATTATCGCAGATAGCGCCTGTAAGGACATGGCCCCCG
ACCTAGAAGGAGAACTCTTCCAAGCCATGCTCGAAACAGCCAGCAAAGCCGACCCTCTCGGCATCAATGGCCGCCACGGA
CTAGCCCAATACCAAGAACTAGGTTACCTCTCTACCGACCACCACGAAAGTGTTAGCCATACTCTAGACTATGCCTATAG
TGACTTTTGTATCGCCAGCTGTGCCAAAAAACTAGAGAACATAGAAATCGCTGAAACCTACAAGGCTGCTTCACAAAATT
ACCGCCAGCTATTTGACGCTGAGACAGGTTACATGCGAGCACGAGACAATCAAGGAAACTTTCACCCTGACTTCTCTCCT
TATAGTTGGGGGCGAGACTACGCTGAATGCTCTGCCATTCAAGCTACTTTAGGCGTTCTCCACGACATCCCTGGCTTAAT
CCAACTGATGGGTGGAAAAGAAACCTTTAGCAACTATCTTTTGAAAGCCTGTCAAGATGCTCCCCTCTTTGAAACAACAG
GCTATGGTTACGAAATTCACGAAATGAGCGAGATGGCTACTGCTCCTTTTGGACAAATAGCCATTTCCAACCAGCCTAGT
TTCCACATTCCTTATCTCTTCCGCTACAGCGATTACCCTGACTACACTGCCCTTCTTATCAAGACGCTCCGTCAGAAAGC
TTTTCACCCAAGTTGGGAAGCCTATCCTGGAGATGAAGACAATGGTAGTCTCTCTGCTTGGTACATCTGGTCAGCTCTCG
GATTTTATCCAACCTGTCCAGGAAAACCAAGCTATGATCTCGGAATCCCTCTCTTTGACCATCTACGAGTCTACCTAGCT
AAAGAAAATAAATGGCTAGATATTCATACTGAGCAAAACCACAGCCATTTTAACTTTGTCAAAGAATGCCGACTGGACAA
AACACTCGTATCAACTATTCAACACCAAGACCTCCTAAAAGCTGAACAACTAACTTTCACCCTCAGCTGGCTACCAAATC
ACTAA

Upstream 100 bases:

>100_bases
AATGATAGTCATTTTTCTACAAAATAGTTATCTTTAAAACTCCTTTTCTAAAGGCCCTCTTTTTCTGATATAATGTAGAA
AAACAGCTAAAGGAAAGACT

Downstream 100 bases:

>100_bases
TAACCAAAAGAACCTTTGCATCGCGCAAAGGTTCTTCTTTTATGAAACTTGGACTTGAAGTTGATCCACAAGCTGACCAT
CCACCGTTAGGTTCAGATAG

Product: alpha-1,2-mannosidase

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Glycosyl Hydrolase Family; Secreted Protein; Outer Membrane Protein; Glycoside Hydrolase Family Protein; Cell Wall Antigen; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Glycosyl Hydrolase; Antigen; Glycosyltransferase; Lipoprotein; Mannosidase

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MKPLLETIDTRFGTASKHAFSRGNTLPYTGVPFGMNYFVPQTSDQDGSWFFDPHLPIFQGIRLTHQPSPWIGDYSWLLLT
PVTSQLGGDSLFHRQSSYDIDKACFQPHYLKLFSLRYQIETQLTPTCYGASIRLKQKQGKALSLYLHAADELTVEQVDKR
TLALRQEGKTETNKNSLTMFTALQMNTDILAISQEAGDWRIDLASSQTEMQLATSFISPSQALINLPQEDFDSCKTSAQA
DWENLLHRFDIIETGEADRTFFDHCLYRLFLFPQTFYEVDESGKAIHMDLATGTVKPGVLFSNNGFWDTFRTTFPLFALI
IPEHYQRFLEGFLNSYRDTGFLPKWLAPDERGMMPGTLLDGIIADSACKDMAPDLEGELFQAMLETASKADPLGINGRHG
LAQYQELGYLSTDHHESVSHTLDYAYSDFCIASCAKKLENIEIAETYKAASQNYRQLFDAETGYMRARDNQGNFHPDFSP
YSWGRDYAECSAIQATLGVLHDIPGLIQLMGGKETFSNYLLKACQDAPLFETTGYGYEIHEMSEMATAPFGQIAISNQPS
FHIPYLFRYSDYPDYTALLIKTLRQKAFHPSWEAYPGDEDNGSLSAWYIWSALGFYPTCPGKPSYDLGIPLFDHLRVYLA
KENKWLDIHTEQNHSHFNFVKECRLDKTLVSTIQHQDLLKAEQLTFTLSWLPNH

Sequences:

>Translated_694_residues
MKPLLETIDTRFGTASKHAFSRGNTLPYTGVPFGMNYFVPQTSDQDGSWFFDPHLPIFQGIRLTHQPSPWIGDYSWLLLT
PVTSQLGGDSLFHRQSSYDIDKACFQPHYLKLFSLRYQIETQLTPTCYGASIRLKQKQGKALSLYLHAADELTVEQVDKR
TLALRQEGKTETNKNSLTMFTALQMNTDILAISQEAGDWRIDLASSQTEMQLATSFISPSQALINLPQEDFDSCKTSAQA
DWENLLHRFDIIETGEADRTFFDHCLYRLFLFPQTFYEVDESGKAIHMDLATGTVKPGVLFSNNGFWDTFRTTFPLFALI
IPEHYQRFLEGFLNSYRDTGFLPKWLAPDERGMMPGTLLDGIIADSACKDMAPDLEGELFQAMLETASKADPLGINGRHG
LAQYQELGYLSTDHHESVSHTLDYAYSDFCIASCAKKLENIEIAETYKAASQNYRQLFDAETGYMRARDNQGNFHPDFSP
YSWGRDYAECSAIQATLGVLHDIPGLIQLMGGKETFSNYLLKACQDAPLFETTGYGYEIHEMSEMATAPFGQIAISNQPS
FHIPYLFRYSDYPDYTALLIKTLRQKAFHPSWEAYPGDEDNGSLSAWYIWSALGFYPTCPGKPSYDLGIPLFDHLRVYLA
KENKWLDIHTEQNHSHFNFVKECRLDKTLVSTIQHQDLLKAEQLTFTLSWLPNH
>Mature_694_residues
MKPLLETIDTRFGTASKHAFSRGNTLPYTGVPFGMNYFVPQTSDQDGSWFFDPHLPIFQGIRLTHQPSPWIGDYSWLLLT
PVTSQLGGDSLFHRQSSYDIDKACFQPHYLKLFSLRYQIETQLTPTCYGASIRLKQKQGKALSLYLHAADELTVEQVDKR
TLALRQEGKTETNKNSLTMFTALQMNTDILAISQEAGDWRIDLASSQTEMQLATSFISPSQALINLPQEDFDSCKTSAQA
DWENLLHRFDIIETGEADRTFFDHCLYRLFLFPQTFYEVDESGKAIHMDLATGTVKPGVLFSNNGFWDTFRTTFPLFALI
IPEHYQRFLEGFLNSYRDTGFLPKWLAPDERGMMPGTLLDGIIADSACKDMAPDLEGELFQAMLETASKADPLGINGRHG
LAQYQELGYLSTDHHESVSHTLDYAYSDFCIASCAKKLENIEIAETYKAASQNYRQLFDAETGYMRARDNQGNFHPDFSP
YSWGRDYAECSAIQATLGVLHDIPGLIQLMGGKETFSNYLLKACQDAPLFETTGYGYEIHEMSEMATAPFGQIAISNQPS
FHIPYLFRYSDYPDYTALLIKTLRQKAFHPSWEAYPGDEDNGSLSAWYIWSALGFYPTCPGKPSYDLGIPLFDHLRVYLA
KENKWLDIHTEQNHSHFNFVKECRLDKTLVSTIQHQDLLKAEQLTFTLSWLPNH

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78938; Mature: 78938

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00256 AKH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLETIDTRFGTASKHAFSRGNTLPYTGVPFGMNYFVPQTSDQDGSWFFDPHLPIFQG
CCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCEEECCCCHHHHC
IRLTHQPSPWIGDYSWLLLTPVTSQLGGDSLFHRQSSYDIDKACFQPHYLKLFSLRYQIE
CEEECCCCCCCCCCEEEEEECHHHHCCCCHHHHCCCCCCHHHHHCCHHHHHHHHHEEEEE
TQLTPTCYGASIRLKQKQGKALSLYLHAADELTVEQVDKRTLALRQEGKTETNKNSLTMF
CCCCCEEECCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
TALQMNTDILAISQEAGDWRIDLASSQTEMQLATSFISPSQALINLPQEDFDSCKTSAQA
EEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCC
DWENLLHRFDIIETGEADRTFFDHCLYRLFLFPQTFYEVDESGKAIHMDLATGTVKPGVL
HHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE
FSNNGFWDTFRTTFPLFALIIPEHYQRFLEGFLNSYRDTGFLPKWLAPDERGMMPGTLLD
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
GIIADSACKDMAPDLEGELFQAMLETASKADPLGINGRHGLAQYQELGYLSTDHHESVSH
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHH
TLDYAYSDFCIASCAKKLENIEIAETYKAASQNYRQLFDAETGYMRARDNQGNFHPDFSP
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
YSWGRDYAECSAIQATLGVLHDIPGLIQLMGGKETFSNYLLKACQDAPLFETTGYGYEIH
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCEEHH
EMSEMATAPFGQIAISNQPSFHIPYLFRYSDYPDYTALLIKTLRQKAFHPSWEAYPGDED
HHHHHHCCCCCEEEECCCCCEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
NGSLSAWYIWSALGFYPTCPGKPSYDLGIPLFDHLRVYLAKENKWLDIHTEQNHSHFNFV
CCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCEEEEEECCCCCHHHHH
KECRLDKTLVSTIQHQDLLKAEQLTFTLSWLPNH
HHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC
>Mature Secondary Structure
MKPLLETIDTRFGTASKHAFSRGNTLPYTGVPFGMNYFVPQTSDQDGSWFFDPHLPIFQG
CCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCEEECCCCHHHHC
IRLTHQPSPWIGDYSWLLLTPVTSQLGGDSLFHRQSSYDIDKACFQPHYLKLFSLRYQIE
CEEECCCCCCCCCCEEEEEECHHHHCCCCHHHHCCCCCCHHHHHCCHHHHHHHHHEEEEE
TQLTPTCYGASIRLKQKQGKALSLYLHAADELTVEQVDKRTLALRQEGKTETNKNSLTMF
CCCCCEEECCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
TALQMNTDILAISQEAGDWRIDLASSQTEMQLATSFISPSQALINLPQEDFDSCKTSAQA
EEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCC
DWENLLHRFDIIETGEADRTFFDHCLYRLFLFPQTFYEVDESGKAIHMDLATGTVKPGVL
HHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE
FSNNGFWDTFRTTFPLFALIIPEHYQRFLEGFLNSYRDTGFLPKWLAPDERGMMPGTLLD
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
GIIADSACKDMAPDLEGELFQAMLETASKADPLGINGRHGLAQYQELGYLSTDHHESVSH
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHH
TLDYAYSDFCIASCAKKLENIEIAETYKAASQNYRQLFDAETGYMRARDNQGNFHPDFSP
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
YSWGRDYAECSAIQATLGVLHDIPGLIQLMGGKETFSNYLLKACQDAPLFETTGYGYEIH
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCEEHH
EMSEMATAPFGQIAISNQPSFHIPYLFRYSDYPDYTALLIKTLRQKAFHPSWEAYPGDED
HHHHHHCCCCCEEEECCCCCEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
NGSLSAWYIWSALGFYPTCPGKPSYDLGIPLFDHLRVYLAKENKWLDIHTEQNHSHFNFV
CCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCEEEEEECCCCCHHHHH
KECRLDKTLVSTIQHQDLLKAEQLTFTLSWLPNH
HHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA